F166137

General Info

Members Datasets Scaffolds Average Seq Length
136 115 272 138

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10118609|Ga0081538_101186093
Length 157
Sequence VCWIWNVRKSFHGTSNCSVVRYLLDTNVLSEVRRPRGDAGVKRWISTVPTEDLYLSVLTLGEVRRGIGLLSRRDHMQADVYEAWLVTVLRDYADRVLPVDAEAAEEWGRMNVPDPISIVDGLMAATAKVRNMTFVTRNTADVARTGVRLLNPFDASE

Samples

Sample ID Description Type Environment
1 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
51 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
52 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
53 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
54 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
55 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
59 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
60 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
61 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
62 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
63 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
64 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
65 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
66 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
67 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
68 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
69 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
70 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
71 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
72 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
73 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
74 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
77 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
78 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
79 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
83 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
84 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
85 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
86 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
98 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
99 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
102 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
103 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
104 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
105 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
106 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
107 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
108 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
109 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
110 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
111 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
112 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
113 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
114 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
115 2558860280 Kutzneria sp. 744 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.06
Metatranscriptomes 2.21
Isolates 0.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.94
Nodule 0
Rhizoplane 2.21
Rhizosphere 90.44
Stem 0
Stem Tuber 0
Unclassified 30.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081538_10118609 3300005981 Bacteria 1278
2 Ga0070666_10137418 3300005335 Bacteria 1701
3 Ga0070660_100066168 3300005339 Bacteria 2813
4 Ga0070659_100004643 3300005366 Bacteria 9812
5 Ga0070714_100838485 3300005435 Bacteria 891
6 Ga0070713_100000080 3300005436 Bacteria 60198
7 Ga0070711_100029374 3300005439 Bacteria 3627
8 Ga0070708_100992855 3300005445 Unclassified 787
9 Ga0070706_100439761 3300005467 Bacteria 1214
10 Ga0070707_100085298 3300005468 Bacteria 3053
11 Ga0070707_100433335 3300005468 Unclassified 1275
12 Ga0070699_100010442 3300005518 Bacteria 8037
13 Ga0070665_100010628 3300005548 Bacteria 9318
14 Ga0068855_100324151 3300005563 Bacteria 1702
15 Ga0068857_100005853 3300005577 Bacteria 10501
16 Ga0068852_100184968 3300005616 Bacteria 1961
17 Ga0068862_100918867 3300005844 Unclassified 861
18 Ga0081455_10000413 3300005937 Bacteria 56249
19 Ga0081538_10086500 3300005981 Bacteria 1641
20 Ga0081540_1021859 3300005983 Unclassified 3792
21 Ga0081539_10015979 3300005985 Bacteria 5405
22 Ga0081539_10059892 3300005985 Bacteria 2093
23 Ga0081539_10092483 3300005985 Unclassified 1560
24 Ga0075368_10197787 3300006042 Unclassified 850
25 Ga0068865_100789434 3300006881 Bacteria 818
26 Ga0075435_100388564 3300007076 Unclassified 1199
27 Ga0099794_10051593 3300007265 Unclassified 1981
28 Ga0105240_10896628 3300009093 Bacteria 954
29 Ga0111539_11794565 3300009094 Unclassified 711
30 Ga0114129_10567108 3300009147 Bacteria 1474
31 Ga0105243_10002128 3300009148 Bacteria 16741
32 Ga0105248_11925374 3300009177 Unclassified 671
33 Ga0105249_10422569 3300009553 Bacteria 1367
34 Ga0105239_10020375 3300010375 Bacteria 7315
35 Ga0105239_10102556 3300010375 Bacteria 3166
36 Ga0157372_10000150 3300013307 Bacteria 75963
37 Ga0157376_11046054 3300014969 Bacteria 840
38 Ga0197907_10147667 3300020069 Bacteria 826
39 Ga0206356_10479010 3300020070 Bacteria 525
40 Ga0213876_10007061 3300021384 Bacteria 6124
41 Ga0224712_10433198 3300022467 Unclassified 630
42 Ga0207684_10125213 3300025910 Unclassified 2205
43 Ga0207684_10720274 3300025910 Unclassified 847
44 Ga0207663_10063794 3300025916 Bacteria 2348
45 Ga0207646_10356473 3300025922 Bacteria 1321
46 Ga0207646_10380205 3300025922 Unclassified 1276
47 Ga0207694_10100840 3300025924 Bacteria 2288
48 Ga0207700_10000013 3300025928 Bacteria 230462
49 Ga0207690_10016107 3300025932 Bacteria 4544
50 Ga0207709_10012404 3300025935 Bacteria 4697
51 Ga0207704_10346025 3300025938 Unclassified 1156
52 Ga0207674_10064478 3300026116 Bacteria 3695
53 Ga0207698_10040778 3300026142 Bacteria 3454
54 Ga0209813_10171587 3300027866 Unclassified 788
55 Ga0268266_10008675 3300028379 Bacteria 9020
56 Ga0268265_10737749 3300028380 Unclassified 955
57 Ga0307408_100226665 3300031548 Bacteria 1528
58 Ga0307405_10366860 3300031731 Bacteria 1116
59 Ga0307405_11122891 3300031731 Bacteria 676
60 Ga0307413_10118344 3300031824 Bacteria 1789
61 Ga0307410_10147397 3300031852 Bacteria 1748
62 Ga0307410_10170281 3300031852 Bacteria 1640
63 Ga0307407_10136053 3300031903 Bacteria 1579
64 Ga0307412_11999369 3300031911 Unclassified 536
65 Ga0307409_100009775 3300031995 Bacteria 5917
66 Ga0307409_100161876 3300031995 Unclassified 1958
67 Ga0307409_100234723 3300031995 Bacteria 1665
68 Ga0307416_100036541 3300032002 Bacteria 3768
69 Ga0307416_100509128 3300032002 Bacteria 1270
70 Ga0307416_100990509 3300032002 Bacteria 943
71 Ga0307414_10215591 3300032004 Unclassified 1572
72 Ga0307411_10052929 3300032005 Bacteria 2657
73 Ga0307411_10837856 3300032005 Bacteria 813
74 Ga0307411_11362177 3300032005 Bacteria 648
75 Ga0307415_100056805 3300032126 Bacteria 2686
76 Ga0307415_100665616 3300032126 Unclassified 935
77 Ga0307415_100849482 3300032126 Bacteria 837
78 Ga0307415_101507435 3300032126 Unclassified 643
79 Ga0436365_0233798 3300039437 Bacteria 778
80 Ga0436365_0317803 3300039437 Bacteria 16501
81 Ga0436365_0595828 3300039437 Bacteria 1187
82 Ga0436365_0668722 3300039437 Bacteria 835
83 Ga0439448_0017911 3300042005 Bacteria 2166
84 Ga0439450_180277 3300042008 Bacteria 561
85 Ga0439455_0020829 3300042012 Bacteria 1558
86 Ga0439463_005889 3300042016 Bacteria 3043
87 Ga0450904_036677 3300042139 Bacteria 520
88 Ga0439464_0030621 3300042439 Unclassified 1508
89 Ga0439460_0070531 3300042461 Unclassified 1082
90 Ga0453683_0325670 3300044673 Unclassified 985
91 Ga0466959_0463152 3300045049 Bacteria 859
92 Ga0451576_1183585 3300045051 Bacteria 798
93 Ga0495629_0000091 3300046459 Bacteria 78697
94 Ga0495651_0061925 3300046462 Bacteria 2864
95 Ga0495653_0265160 3300046463 Bacteria 1134
96 Ga0495594_0000001 3300046499 Bacteria 293051
97 Ga0495586_0000840 3300046535 Bacteria 17589
98 Ga0495645_0084834 3300046543 Bacteria 2268
99 Ga0495622_0000069 3300046557 Bacteria 89759
100 Ga0495604_0058419 3300047317 Bacteria 2962
101 Ga0495676_0000320 3300047321 Bacteria 38969
102 Ga0495684_0396435 3300047471 Bacteria 970
103 Ga0496104_0577866 3300048907 Unclassified 1034
104 Ga0496110_0000010 3300048913 Bacteria 102630
105 Ga0496111_0000013 3300048914 Bacteria 82182
106 Ga0501292_025557 3300049515 Bacteria 973
107 Ga0501299_061684 3300049522 Unclassified 795
108 Ga0501031_0319385 3300049568 Bacteria 1006
109 Ga0501037_0367679 3300049573 Unclassified 990
110 Ga0501040_0155576 3300049576 Bacteria 1614
111 Ga0501042_1100115 3300049578 Unclassified 579
112 Ga0501043_0478890 3300049579 Unclassified 932
113 Ga0501048_0389853 3300049582 Bacteria 995
114 Ga0501068_0205462 3300049584 Bacteria 1250
115 Ga0501074_0015591 3300049590 Bacteria 5524
116 Ga0501075_0077929 3300049591 Bacteria 2508
117 Ga0501076_0200920 3300049592 Bacteria 1627
118 Ga0501077_0294271 3300049593 Bacteria 1034
119 Ga0501202_049283 3300049652 Unclassified 929
120 Ga0501079_1042181 3300049741 Unclassified 644
121 Ga0501080_0027494 3300049742 Bacteria 5290
122 Ga0501081_0886943 3300049743 Unclassified 672
123 Ga0501270_162700 3300049767 Unclassified 516
124 Ga0501271_004959 3300049768 Unclassified 1283
125 Ga0501283_006913 3300049779 Bacteria 1603
126 Ga0501212_065681 3300049851 Unclassified 635
127 nmdc:mga04h51_154456_c1 3300050495 Unclassified 879
128 nmdc:mga05p37_921065_c1 3300050507 Unclassified 939
129 nmdc:mga06r32_997110_c1 3300050510 Bacteria 790
130 Ga0500641_0000560 3300053096 Bacteria 13447
131 Ga0501084_0272469 3300054114 Bacteria 1429
132 Ga0590074_045892 3300059423 Unclassified 793
133 Ga0590077_001462 3300059426 Bacteria 5522
134 Ga0501082_0677102 3300060353 Unclassified 903
135 Ga0530510_0683177 3300061734 Unclassified 782
136 2559429600 2558860280 Bacteria 11429938
137 Ga0081538_10118609
138 Ga0070666_10137418
139 Ga0070660_100066168
140 Ga0070659_100004643
141 Ga0070714_100838485
142 Ga0070713_100000080
143 Ga0070711_100029374
144 Ga0070708_100992855
145 Ga0070706_100439761
146 Ga0070707_100085298
147 Ga0070707_100433335
148 Ga0070699_100010442
149 Ga0070665_100010628
150 Ga0068855_100324151
151 Ga0068857_100005853
152 Ga0068852_100184968
153 Ga0068862_100918867
154 Ga0081455_10000413
155 Ga0081538_10086500
156 Ga0081540_1021859
157 Ga0081539_10015979
158 Ga0081539_10059892
159 Ga0081539_10092483
160 Ga0075368_10197787
161 Ga0068865_100789434
162 Ga0075435_100388564
163 Ga0099794_10051593
164 Ga0105240_10896628
165 Ga0111539_11794565
166 Ga0114129_10567108
167 Ga0105243_10002128
168 Ga0105248_11925374
169 Ga0105249_10422569
170 Ga0105239_10020375
171 Ga0105239_10102556
172 Ga0157372_10000150
173 Ga0157376_11046054
174 Ga0197907_10147667
175 Ga0206356_10479010
176 Ga0213876_10007061
177 Ga0224712_10433198
178 Ga0207684_10125213
179 Ga0207684_10720274
180 Ga0207663_10063794
181 Ga0207646_10356473
182 Ga0207646_10380205
183 Ga0207694_10100840
184 Ga0207700_10000013
185 Ga0207690_10016107
186 Ga0207709_10012404
187 Ga0207704_10346025
188 Ga0207674_10064478
189 Ga0207698_10040778
190 Ga0209813_10171587
191 Ga0268266_10008675
192 Ga0268265_10737749
193 Ga0307408_100226665
194 Ga0307405_10366860
195 Ga0307405_11122891
196 Ga0307413_10118344
197 Ga0307410_10147397
198 Ga0307410_10170281
199 Ga0307407_10136053
200 Ga0307412_11999369
201 Ga0307409_100009775
202 Ga0307409_100161876
203 Ga0307409_100234723
204 Ga0307416_100036541
205 Ga0307416_100509128
206 Ga0307416_100990509
207 Ga0307414_10215591
208 Ga0307411_10052929
209 Ga0307411_10837856
210 Ga0307411_11362177
211 Ga0307415_100056805
212 Ga0307415_100665616
213 Ga0307415_100849482
214 Ga0307415_101507435
215 Ga0436365_0233798
216 Ga0436365_0317803
217 Ga0436365_0595828
218 Ga0436365_0668722
219 Ga0439448_0017911
220 Ga0439450_180277
221 Ga0439455_0020829
222 Ga0439463_005889
223 Ga0450904_036677
224 Ga0439464_0030621
225 Ga0439460_0070531
226 Ga0453683_0325670
227 Ga0466959_0463152
228 Ga0451576_1183585
229 Ga0495629_0000091
230 Ga0495651_0061925
231 Ga0495653_0265160
232 Ga0495594_0000001
233 Ga0495586_0000840
234 Ga0495645_0084834
235 Ga0495622_0000069
236 Ga0495604_0058419
237 Ga0495676_0000320
238 Ga0495684_0396435
239 Ga0496104_0577866
240 Ga0496110_0000010
241 Ga0496111_0000013
242 Ga0501292_025557
243 Ga0501299_061684
244 Ga0501031_0319385
245 Ga0501037_0367679
246 Ga0501040_0155576
247 Ga0501042_1100115
248 Ga0501043_0478890
249 Ga0501048_0389853
250 Ga0501068_0205462
251 Ga0501074_0015591
252 Ga0501075_0077929
253 Ga0501076_0200920
254 Ga0501077_0294271
255 Ga0501202_049283
256 Ga0501079_1042181
257 Ga0501080_0027494
258 Ga0501081_0886943
259 Ga0501270_162700
260 Ga0501271_004959
261 Ga0501283_006913
262 Ga0501212_065681
263 nmdc:mga04h51_154456_c1
264 nmdc:mga05p37_921065_c1
265 nmdc:mga06r32_997110_c1
266 Ga0500641_0000560
267 Ga0501084_0272469
268 Ga0590074_045892
269 Ga0590077_001462
270 Ga0501082_0677102
271 Ga0530510_0683177
272 2559429600

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01850

PIN

PIN domain

22

147

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2h1c-assembly1.cif.gz_A crystal structure of fitacb from neisseria gonorrhoeae 0.913 3 137
2h1o-assembly1.cif.gz_A structure of fitab bound to ir36 dna fragment 0.8985 3 137
2h1c-assembly1.cif.gz_A crystal structure of fitacb from neisseria gonorrhoeae 0.894 3 137
2h1o-assembly1.cif.gz_A structure of fitab bound to ir36 dna fragment 0.88 3 137
7by2-assembly1.cif.gz_B-2 toxin-antitoxin complex from klebsiella pneumoniae 0.8559 2 134
ID Description Score Start End Superfamily
af_P9WF99_2_82_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9181 2 73 3.40.50.1010
2k3rA01 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces;Immunoglobulin FC, subunit C 0.9003 42 75 1.20.5.420
2bsqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8985 3 137 3.40.50.1010
2bsqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.88 3 137 3.40.50.1010
1x0tA01 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces;Immunoglobulin FC, subunit C 0.8542 42 75 1.20.5.420
ID Description Score Start End GO Terms
AF-A0A538PXM7-F1-model_v4 Type II toxin-antitoxin system VapC family toxin 0.9967 1 109 GO:0004518
GO:0046872
AF-A0A7V0Y4Q5-F1-model_v4 Type II toxin-antitoxin system VapC family toxin 0.9931 1 136 GO:0004518
GO:0046872
AF-A0A150P3M2-F1-model_v4 PIN domain-containing protein 0.992 84 137
AF-A0A6N7I9Z4-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9916 1 137 GO:0000287
GO:0004540
GO:0016020
GO:0090729
AF-A0A840H3R4-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.991 1 137 GO:0000287
GO:0004540
GO:0090729

Map