F165236

General Info

Members Datasets Scaffolds Average Seq Length
136 120 272 1021

Family's Representative Sequence

Representative Sequence 3300004625|Ga0055543_1001767|Ga0055543_10017673
Length 1071
Sequence MPDRPRSERRTQNRVVALFTDTSRSDCLGYRYLGDWHNRDNNRPIETALLRANLATRGYGEAHIRAALQRLETAADATGISLYQANLRTYQLLRYGVPVQVAVGQAHETVHLVDWAHPEANDFALAEEVTLRGGHERRPDIVLYLNGIAIGVIELKRSSVEVADGVRQLVTNQEEIFNKGFFSTVQLVFAGSDSQGLRYGTTDTPEQFFVQWKGQDGGASLEPPAGIGEGPQTGFLYGAEPTAKAVSCGQGNRSISGSMAGQVSQPGALLDRPLAEMCEKTRLLDLIRNFIIFDGGRKKVPRPHQFAGVKAAQQRVAKHEGGVIWHTQGSGKSILMVLIAKWLLEHDPEARILIVTDRDELDKQIEGVMRNANVIGADSPSPRITSRREFSEKLAAPTPRLLCALLHKFQPDLKAPPPPTHGRFYVFVDECHRTQGGDMNKQMKRWLENAVFIGFTGTPLLRKDKQTTRDVFGTYIHTYKFQEAVADKVVLDLKYEARDVPQRLTSRKEIDDWFERRTRALNNFQRAVLRKRWATMEELMSAGERKQRIIASIIHDFGVKPRLDNDRGTAILVAASIYDACHYYRLFHNTPFGQYCGIITSFEPNHNAISREPKDSDERYKFDTYTKHVLKTGQTTKAYEDEAKRRFIEEPANCKLLIVVSKLLTGFDAPSCTYIYLDNDLHDHNLFQAICRTNRLDGDDKDYGYIVDFKELFQDVQNSIAVYSSDELDIDADGKDGNVIVKDWLVEGRAQLDAAREALRYLCEPVAQPREVEQYLHYFCGDASNASALAETEPLRVSFYKAAAAFLRAYSDIAQNLAEAGYSTAEITALTQETEFYNDIRAAIKRHSGEELDIKPFEADMRHLINTYIQADPATDLGNLNSLPLTELIIETGIHDAIARKLNEKGKLSKNAIAEGIINNVRKTIIRDQLTDPKFYAEMSILLDDLIKQSRTDAAAYEAFLKKAEELVQHLGRKGPSRGVPAVLHGKPEAIVLFNNLASLPVTTFQCPSDDDGRATLALEIDQAMRERAPAGWKGDDIREKQVLNALYPIMARDRLATESIFEIIKNQPGY

Samples

Sample ID Description Type Environment
1 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
34 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
35 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
37 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
40 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
59 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
60 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
61 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
63 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
66 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
70 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
76 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
77 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
78 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
79 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
80 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
81 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
84 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
85 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
86 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
87 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
88 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
89 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
90 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
91 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
92 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
95 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
96 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
97 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
103 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
104 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
105 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
106 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
107 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
110 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
111 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
112 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
113 2643221571 Pseudomonas sp. Root569 Isolate Unclassified
114 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
115 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
116 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
117 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
118 2919487758 Pseudomonas koreensis 3441 Isolate Unclassified
119 2928536128 Burkholderia sola 565 Isolate Unclassified
120 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.18
Metatranscriptomes 0
Isolates 8.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.18
Nodule 0.74
Rhizoplane 0.74
Rhizosphere 73.53
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055543_1001767 3300004625 Bacteria 8061
2 CNXas_1000013 3300000545 Bacteria 36942
3 rootL2_10008696 3300003322 Bacteria 11574
4 JGI25160J50197_1001287 3300003354 Bacteria 12689
5 JGI25160J50197_1004383 3300003354 Bacteria 6116
6 Ga0055526_1002038 3300003771 Bacteria 13904
7 Ga0055524_1001115 3300003775 Bacteria 16200
8 Ga0055528_1000232 3300003790 Bacteria 46543
9 Ga0055528_1001242 3300003790 Bacteria 16200
10 Ga0065165_1000010 3300005262 Bacteria 323737
11 Ga0065165_1001088 3300005262 Bacteria 32379
12 Ga0065714_10002582 3300005288 Bacteria 14321
13 Ga0065714_10065118 3300005288 Bacteria 12778
14 Ga0070658_10003270 3300005327 Bacteria 13381
15 Ga0070683_100015386 3300005329 Bacteria 6719
16 Ga0070670_100016778 3300005331 Bacteria 6284
17 Ga0070680_100005248 3300005336 Bacteria 9805
18 Ga0070660_100000701 3300005339 Bacteria 22190
19 Ga0070661_100009524 3300005344 Bacteria 6730
20 Ga0070675_100009162 3300005354 Bacteria 7689
21 Ga0070673_100008445 3300005364 Bacteria 6848
22 Ga0070681_10000974 3300005458 Bacteria 24202
23 Ga0070698_100003515 3300005471 Bacteria 17247
24 Ga0070699_100009576 3300005518 Bacteria 8394
25 Ga0070679_100010652 3300005530 Bacteria 8725
26 Ga0070684_100001187 3300005535 Bacteria 18726
27 Ga0068855_100005729 3300005563 Bacteria 15171
28 Ga0070664_100002547 3300005564 Bacteria 14703
29 Ga0068864_100021607 3300005618 Bacteria 5389
30 Ga0068861_100023299 3300005719 Bacteria 4465
31 Ga0068863_100051966 3300005841 Bacteria 3884
32 Ga0105244_10001124 3300009036 Bacteria 22250
33 Ga0105242_10021414 3300009176 Bacteria 5076
34 Ga0157370_10005297 3300013104 Bacteria 14486
35 Ga0157369_10000004 3300013105 Bacteria 479764
36 Ga0163162_10000332 3300013306 Bacteria 43297
37 Ga0182007_10000161 3300015262 Bacteria 46175
38 Ga0182007_10000405 3300015262 Bacteria 26612
39 Ga0163161_10000429 3300017792 Bacteria 35217
40 Ga0209673_1000082 3300025273 Bacteria 219716
41 Ga0209673_1000840 3300025273 Bacteria 40156
42 Ga0209025_1009741 3300025294 Bacteria 6636
43 Ga0209564_1002571 3300025295 Bacteria 13956
44 Ga0209256_1000555 3300025299 Bacteria 53550
45 Ga0207426_1000379 3300025302 Bacteria 76587
46 Ga0207426_1001628 3300025302 Bacteria 17671
47 Ga0207655_1000274 3300025728 Bacteria 80899
48 Ga0207705_10000666 3300025909 Bacteria 28565
49 Ga0207707_10000667 3300025912 Bacteria 34050
50 Ga0207660_10004440 3300025917 Bacteria 9141
51 Ga0207657_10003394 3300025919 Bacteria 17022
52 Ga0207649_10002028 3300025920 Bacteria 11519
53 Ga0207652_10000668 3300025921 Bacteria 33525
54 Ga0207650_10008681 3300025925 Bacteria 6942
55 Ga0207659_10001809 3300025926 Bacteria 12650
56 Ga0207709_10005195 3300025935 Bacteria 7413
57 Ga0207661_10010272 3300025944 Bacteria 6734
58 Ga0207679_10000252 3300025945 Bacteria 40854
59 Ga0207679_10000647 3300025945 Bacteria 23264
60 Ga0207667_10004078 3300025949 Bacteria 17940
61 Ga0207667_10005809 3300025949 Bacteria 15049
62 Ga0207678_10002726 3300026067 Bacteria 16015
63 Ga0207641_10040380 3300026088 Bacteria 3907
64 Ga0207676_10009421 3300026095 Bacteria 6949
65 Ga0207675_100037294 3300026118 Bacteria 4535
66 Ga0265338_10001754 3300028800 Bacteria 34257
67 Ga0265338_10021065 3300028800 Bacteria 6816
68 Ga0265320_10014726 3300031240 Bacteria 4438
69 Ga0265342_10005897 3300031712 Bacteria 9238
70 Ga0307516_10000155 3300031730 Bacteria 85605
71 Ga0373925_0008399 3300037068 Bacteria 7519
72 Ga0395899_0012214 3300037312 Bacteria 6577
73 Ga0395898_0006925 3300037466 Bacteria 12050
74 Ga0395901_0000148 3300038443 Bacteria 91208
75 Ga0439451_000037 3300042009 Bacteria 26993
76 Ga0439460_0002402 3300042461 Bacteria 4514
77 Ga0451577_0004127 3300042876 Bacteria 15566
78 Ga0451577_0004238 3300042876 Bacteria 15271
79 Ga0466969_0000109 3300044656 Bacteria 43750
80 Ga0466972_0000037 3300044658 Bacteria 137184
81 Ga0466972_0000409 3300044658 Bacteria 22442
82 Ga0453683_0007860 3300044673 Bacteria 7193
83 Ga0466966_0005260 3300044684 Bacteria 8510
84 Ga0453684_0000120 3300044712 Bacteria 345098
85 Ga0453684_0004016 3300044712 Bacteria 32048
86 Ga0466957_0000229 3300044842 Bacteria 26427
87 Ga0466959_0025951 3300045049 Bacteria 4345
88 Ga0495617_001371 3300046452 Bacteria 10759
89 Ga0495617_007298 3300046452 Bacteria 3839
90 Ga0495627_001945 3300046453 Bacteria 10740
91 Ga0495590_0008231 3300046457 Bacteria 3988
92 Ga0495653_0000200 3300046463 Bacteria 48706
93 Ga0495585_0000029 3300046492 Bacteria 145822
94 Ga0495596_0007263 3300046500 Bacteria 5013
95 Ga0495616_0000265 3300046513 Bacteria 42303
96 Ga0495630_0027274 3300046517 Bacteria 4235
97 Ga0495632_0001902 3300046519 Bacteria 16718
98 Ga0495663_0000329 3300046525 Bacteria 17789
99 Ga0495634_0000472 3300046642 Bacteria 39707
100 Ga0495646_0000098 3300046680 Bacteria 42811
101 Ga0495613_0002752 3300046689 Bacteria 13205
102 Ga0495670_0002247 3300046691 Bacteria 9529
103 Ga0495671_0001589 3300046692 Bacteria 15009
104 Ga0495589_0001672 3300046794 Bacteria 12704
105 Ga0495589_0001683 3300046794 Bacteria 12642
106 Ga0495681_0000255 3300047470 Bacteria 43383
107 Ga0495684_0011160 3300047471 Bacteria 6943
108 Ga0496102_0000660 3300048905 Bacteria 34465
109 Ga0496116_0008414 3300048919 Bacteria 8955
110 Ga0496121_0002944 3300048924 Bacteria 24869
111 Ga0496125_0001085 3300048928 Bacteria 41933
112 Ga0496125_0004425 3300048928 Bacteria 16224
113 Ga0495678_000133 3300049459 Bacteria 88302
114 Ga0501034_0003601 3300049571 Bacteria 17582
115 Ga0501046_0003098 3300049580 Bacteria 15339
116 Ga0501047_0013050 3300049581 Bacteria 7870
117 Ga0501044_0001500 3300049823 Bacteria 27352
118 nmdc:mga0k408_998_c1 3300050493 Bacteria 15569
119 Ga0500643_003732 3300053087 Bacteria 7161
120 Ga0500562_000012 3300053108 Bacteria 168210
121 Ga0500593_005934 3300053117 Bacteria 4852
122 Ga0500634_0000172 3300053161 Bacteria 21425
123 Ga0500645_000472 3300053730 Bacteria 27483
124 Ga0501082_0010872 3300060353 Bacteria 7835
125 2520879718 2519899754 Bacteria 5336938
126 2524006425 2523533629 Bacteria 2982326
127 2585424902 2582581873 Bacteria 3032664
128 2588444616 2588253712 Bacteria 5403181
129 2643869610 2643221571 Bacteria 6228673
130 2745077626 2744054633 Bacteria 8678936
131 2874617902 2874612657 Bacteria 8252029
132 2889295433 2889290771 Bacteria 5530962
133 2894514407 2894510363 Bacteria 5121143
134 2919492030 2919487758 Bacteria 5929766
135 2928541321 2928536128 Bacteria 7657547
136 2974293027 2974289157 Bacteria 6080362
137 Ga0055543_1001767
138 CNXas_1000013
139 rootL2_10008696
140 JGI25160J50197_1001287
141 JGI25160J50197_1004383
142 Ga0055526_1002038
143 Ga0055524_1001115
144 Ga0055528_1000232
145 Ga0055528_1001242
146 Ga0065165_1000010
147 Ga0065165_1001088
148 Ga0065714_10002582
149 Ga0065714_10065118
150 Ga0070658_10003270
151 Ga0070683_100015386
152 Ga0070670_100016778
153 Ga0070680_100005248
154 Ga0070660_100000701
155 Ga0070661_100009524
156 Ga0070675_100009162
157 Ga0070673_100008445
158 Ga0070681_10000974
159 Ga0070698_100003515
160 Ga0070699_100009576
161 Ga0070679_100010652
162 Ga0070684_100001187
163 Ga0068855_100005729
164 Ga0070664_100002547
165 Ga0068864_100021607
166 Ga0068861_100023299
167 Ga0068863_100051966
168 Ga0105244_10001124
169 Ga0105242_10021414
170 Ga0157370_10005297
171 Ga0157369_10000004
172 Ga0163162_10000332
173 Ga0182007_10000161
174 Ga0182007_10000405
175 Ga0163161_10000429
176 Ga0209673_1000082
177 Ga0209673_1000840
178 Ga0209025_1009741
179 Ga0209564_1002571
180 Ga0209256_1000555
181 Ga0207426_1000379
182 Ga0207426_1001628
183 Ga0207655_1000274
184 Ga0207705_10000666
185 Ga0207707_10000667
186 Ga0207660_10004440
187 Ga0207657_10003394
188 Ga0207649_10002028
189 Ga0207652_10000668
190 Ga0207650_10008681
191 Ga0207659_10001809
192 Ga0207709_10005195
193 Ga0207661_10010272
194 Ga0207679_10000252
195 Ga0207679_10000647
196 Ga0207667_10004078
197 Ga0207667_10005809
198 Ga0207678_10002726
199 Ga0207641_10040380
200 Ga0207676_10009421
201 Ga0207675_100037294
202 Ga0265338_10001754
203 Ga0265338_10021065
204 Ga0265320_10014726
205 Ga0265342_10005897
206 Ga0307516_10000155
207 Ga0373925_0008399
208 Ga0395899_0012214
209 Ga0395898_0006925
210 Ga0395901_0000148
211 Ga0439451_000037
212 Ga0439460_0002402
213 Ga0451577_0004127
214 Ga0451577_0004238
215 Ga0466969_0000109
216 Ga0466972_0000037
217 Ga0466972_0000409
218 Ga0453683_0007860
219 Ga0466966_0005260
220 Ga0453684_0000120
221 Ga0453684_0004016
222 Ga0466957_0000229
223 Ga0466959_0025951
224 Ga0495617_001371
225 Ga0495617_007298
226 Ga0495627_001945
227 Ga0495590_0008231
228 Ga0495653_0000200
229 Ga0495585_0000029
230 Ga0495596_0007263
231 Ga0495616_0000265
232 Ga0495630_0027274
233 Ga0495632_0001902
234 Ga0495663_0000329
235 Ga0495634_0000472
236 Ga0495646_0000098
237 Ga0495613_0002752
238 Ga0495670_0002247
239 Ga0495671_0001589
240 Ga0495589_0001672
241 Ga0495589_0001683
242 Ga0495681_0000255
243 Ga0495684_0011160
244 Ga0496102_0000660
245 Ga0496116_0008414
246 Ga0496121_0002944
247 Ga0496125_0001085
248 Ga0496125_0004425
249 Ga0495678_000133
250 Ga0501034_0003601
251 Ga0501046_0003098
252 Ga0501047_0013050
253 Ga0501044_0001500
254 nmdc:mga0k408_998_c1
255 Ga0500643_003732
256 Ga0500562_000012
257 Ga0500593_005934
258 Ga0500634_0000172
259 Ga0500645_000472
260 Ga0501082_0010872
261 2520879718
262 2524006425
263 2585424902
264 2588444616
265 2643869610
266 2745077626
267 2874617902
268 2889295433
269 2894514407
270 2919492030
271 2928541321
272 2974293027

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18766

SWI2_SNF2

SWI2/SNF2 ATPase

304

527

0.91

PF04851

ResIII

Type III restriction enzyme, res subunit

298

461

0.88

PF22679

UvrB_D3-like

UvrB domain 3

566

711

0.84

PF04313

HSDR_N

Type I restriction enzyme R protein N terminus (HSDR_N)

10

207

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bto-assembly1.cif.gz_F ecor124i-arda in the translocation state 0.7394 9 436
1rif-assembly2.cif.gz_B crystal structure of the uvsw helicase from bacteriophage t4 0.7303 236 432
7bto-assembly1.cif.gz_F ecor124i-arda in the translocation state 0.694 9 436
6eg2-assembly1.cif.gz_A crystal structure of human brm in complex with compound 16 0.693 256 417
7xwy-assembly1.cif.gz_A crystal structure of spfft3 n-terminal truncation 0.6846 260 431
ID Description Score Start End Superfamily
af_Q60295_117_300_3.90.1570.50 Alpha Beta;Alpha-Beta Complex;tt1808, chain A; 0.8473 96 256 3.90.1570.50
af_Q57588_8_167_3.90.1570.50 Alpha Beta;Alpha-Beta Complex;tt1808, chain A; 0.7888 97 244 3.90.1570.50
af_Q58611_92_243_3.90.1570.50 Alpha Beta;Alpha-Beta Complex;tt1808, chain A; 0.7885 104 251 3.90.1570.50
af_Q54CD8_480_702_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.785 527 680 3.40.50.300
af_Q2G1G2_65_238_3.90.1570.50 Alpha Beta;Alpha-Beta Complex;tt1808, chain A; 0.7844 79 251 3.90.1570.50
ID Description Score Start End GO Terms
AF-A0A2A9FMW5-F1-model_v4 type I site-specific deoxyribonuclease (EC 3.1.21.3) 0.9757 7 212 GO:0003677
GO:0005524
GO:0009035
GO:0009307
AF-A0A328V610-F1-model_v4 deleted 0.9671 1 210
AF-A0A519MQ26-F1-model_v4 deleted 0.9664 7 287
AF-A0A1B1Q3V3-F1-model_v4 type I site-specific deoxyribonuclease (EC 3.1.21.3) 0.9656 1 167 GO:0003677
GO:0005524
GO:0009035
GO:0009307
AF-A0A2T4U1I0-F1-model_v4 type I site-specific deoxyribonuclease (EC 3.1.21.3) 0.9643 8 131 GO:0003677
GO:0005524
GO:0009035
GO:0009307

Map