F164948

General Info

Members Datasets Scaffolds Average Seq Length
135 96 105 452

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2919059106|2919060693
Length 494
Sequence PTFGQASMSANPKPSVKPKPNRTPGPPQAGNGNTRLRWKRRDPQTRRENVFGRALSHPVRSVPLAFLAVILLGATLLMLPVSRNGTDPASLMTALFTAVSATCVTGLITVDTATYWTPFGHVVILALIQVGGFGIMTLATLLALLVRKSIGLRGQLVVQSETHTLNLGDVRSVLFRVARIMVVFEAVTAAVLAVRFWFAYDSNPAVALWHGVFHAVSAFNNAGFALYSDNLISFREDPYILVPICLAIISGGLGFPVLIHLLNGGGLRVRNWTVHLRLTVFGTVFLLIAGFVLFAAFEWNRAETLGPLSLPGKIVGSFAGSVFPRTAGFNSIDYGVASPETLMVSDILMFIGGGSAGTAGGIKITTFLLLAFAIWNEVRGRDDVTIAHRSISPASVRQALSVALLGIGAVITGTMLLLMFTDYSLEKVLFESISAFATVGMSTGITYNLPPSAEWVLMVLMFTGRIGTVTVASALALSSRPRLFNLPEERPIIG

Samples

Sample ID Description Type Environment
1 2643221561 Nocardioides sp. Root151 Isolate Unclassified
2 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
3 2643221696 Nocardioides sp. Root140 Isolate Unclassified
4 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
5 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
6 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
7 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
8 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
9 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
10 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
11 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
12 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
13 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
14 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
15 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
16 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
17 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
18 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
19 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
20 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
21 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
22 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
23 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
24 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
25 3007252601 Pseudomonas punonensis D1-6 Isolate Unclassified
26 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
27 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
38 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
39 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
44 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
45 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
46 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
47 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
48 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
49 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
50 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
51 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
52 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
53 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
54 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
58 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
59 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
60 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
61 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
62 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
63 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
64 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
65 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
66 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
67 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
68 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
69 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
70 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
71 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
72 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
73 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
74 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
75 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
76 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
77 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
78 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
79 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
80 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
81 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
88 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
89 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
90 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
91 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
92 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
93 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
94 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
95 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
96 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.04
Metatranscriptomes 0.74
Isolates 22.22

Biome Distribution

Category Percentage (%)
Aerial Root 0.74
Bulb 0
Endosphere 4.44
Nodule 0
Rhizoplane 0.74
Rhizosphere 82.22
Stem 0
Stem Tuber 0
Unclassified 11.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000286 3300002773 Bacteria 33541
2 Ga0006562J51391_1013664 3300003578 Bacteria 2630
3 Ga0070678_100061261 3300005456 Bacteria 2773
4 Ga0070672_100159586 3300005543 Bacteria 1870
5 Ga0081538_10000469 3300005981 Bacteria 45269
6 Ga0075364_10008005 3300006051 Bacteria 6299
7 Ga0075432_10002241 3300006058 Bacteria 6431
8 Ga0105246_10006961 3300011119 Bacteria 6916
9 Ga0105246_10044267 3300011119 Bacteria 3024
10 Ga0105246_10080901 3300011119 Bacteria 2314
11 Ga0105246_10129856 3300011119 Bacteria 1880
12 Ga0157375_10185838 3300013308 Bacteria 2231
13 Ga0163163_10356369 3300014325 Bacteria 1519
14 Ga0163161_10043652 3300017792 Bacteria 3228
15 Ga0209129_1000130 3300025258 Bacteria 128065
16 Ga0209025_1000369 3300025294 Bacteria 94915
17 Ga0207697_10007513 3300025315 Bacteria 4855
18 Ga0207679_10196721 3300025945 Bacteria 1681
19 Ga0207683_10035526 3300026121 Bacteria 4335
20 Ga0268265_10195157 3300028380 Bacteria 1752
21 Ga0307408_100012613 3300031548 Bacteria 5602
22 Ga0307408_100023796 3300031548 Bacteria 4175
23 Ga0307408_100078712 3300031548 Bacteria 2458
24 Ga0307405_10009085 3300031731 Bacteria 5080
25 Ga0307405_10009606 3300031731 Bacteria 4967
26 Ga0307405_10086835 3300031731 Bacteria 2060
27 Ga0307413_10001966 3300031824 Bacteria 8150
28 Ga0307413_10011273 3300031824 Bacteria 4385
29 Ga0307410_10019008 3300031852 Bacteria 4168
30 Ga0307410_10023166 3300031852 Bacteria 3855
31 Ga0307410_10085552 3300031852 Bacteria 2225
32 Ga0307410_10171898 3300031852 Bacteria 1633
33 Ga0307406_10011170 3300031901 Bacteria 5089
34 Ga0307406_10021872 3300031901 Bacteria 3789
35 Ga0307406_10031690 3300031901 Bacteria 3221
36 Ga0307406_10040806 3300031901 Bacteria 2888
37 Ga0307407_10002502 3300031903 Bacteria 7218
38 Ga0307407_10026077 3300031903 Bacteria 3090
39 Ga0307407_10109326 3300031903 Bacteria 1733
40 Ga0307412_10110818 3300031911 Bacteria 1959
41 Ga0307412_10143023 3300031911 Bacteria 1754
42 Ga0307412_10168197 3300031911 Bacteria 1636
43 Ga0307409_100001899 3300031995 Bacteria 10651
44 Ga0307409_100017559 3300031995 Bacteria 4775
45 Ga0307409_100021502 3300031995 Bacteria 4424
46 Ga0307416_100011516 3300032002 Bacteria 5905
47 Ga0307416_100017936 3300032002 Bacteria 4970
48 Ga0307416_100134939 3300032002 Bacteria 2230
49 Ga0307416_100201377 3300032002 Bacteria 1889
50 Ga0307414_10004912 3300032004 Bacteria 7308
51 Ga0307414_10092789 3300032004 Bacteria 2249
52 Ga0307411_10004458 3300032005 Bacteria 6710
53 Ga0307411_10010251 3300032005 Bacteria 4984
54 Ga0307411_10026795 3300032005 Bacteria 3475
55 Ga0307415_100006905 3300032126 Bacteria 6164
56 Ga0307415_100037019 3300032126 Bacteria 3203
57 Ga0395899_0094718 3300037312 Bacteria 2160
58 Ga0395900_0144364 3300037418 Bacteria 2435
59 Ga0395900_0162101 3300037418 Bacteria 2280
60 Ga0395901_0112624 3300038443 Bacteria 2857
61 Ga0439438_002839 3300041405 Bacteria 7219
62 Ga0439438_005266 3300041405 Bacteria 4792
63 Ga0439447_003688 3300041407 Bacteria 5400
64 Ga0439466_0003464 3300041411 Bacteria 6113
65 Ga0439466_0012125 3300041411 Bacteria 3181
66 Ga0439442_000082 3300042002 Bacteria 22725
67 Ga0439432_003994 3300042006 Bacteria 5420
68 Ga0439432_014474 3300042006 Bacteria 2670
69 Ga0439432_027474 3300042006 Bacteria 1857
70 Ga0439449_0015094 3300042007 Bacteria 2903
71 Ga0439449_0024777 3300042007 Bacteria 2242
72 Ga0439451_017602 3300042009 Bacteria 1441
73 Ga0439452_000129 3300042010 Bacteria 57788
74 Ga0439452_003069 3300042010 Bacteria 5931
75 Ga0439463_016910 3300042016 Bacteria 1805
76 Ga0450920_000069 3300042122 Bacteria 13238
77 Ga0450902_000744 3300042137 Bacteria 4181
78 Ga0450907_000442 3300042146 Bacteria 12068
79 Ga0450907_001597 3300042146 Bacteria 4797
80 Ga0439434_0000385 3300042435 Bacteria 12556
81 Ga0439460_0000841 3300042461 Bacteria 6988
82 Ga0450918_000532 3300042531 Bacteria 8188
83 Ga0495607_0052552 3300046501 Bacteria 2360
84 Ga0495583_0001538 3300046506 Bacteria 22824
85 Ga0495610_0007401 3300046512 Bacteria 7316
86 Ga0495620_0002221 3300046515 Bacteria 11255
87 Ga0495654_0000804 3300046530 Bacteria 24097
88 Ga0495654_0021613 3300046530 Bacteria 3346
89 Ga0495681_0006880 3300047470 Bacteria 7379
90 Ga0496114_0061369 3300048917 Bacteria 3144
91 Ga0496123_0077443 3300048926 Bacteria 2042
92 Ga0501031_0104758 3300049568 Bacteria 1846
93 Ga0501032_0000782 3300049569 Bacteria 25766
94 Ga0501034_0000669 3300049571 Bacteria 52088
95 Ga0501034_0161097 3300049571 Bacteria 2214
96 Ga0501038_0028900 3300049574 Bacteria 4921
97 Ga0501039_0156487 3300049575 Bacteria 1790
98 Ga0501043_0013960 3300049579 Bacteria 6286
99 Ga0501043_0044224 3300049579 Bacteria 3501
100 Ga0501072_0140564 3300049588 Bacteria 1925
101 Ga0501076_0170003 3300049592 Bacteria 1777
102 Ga0501209_017869 3300049656 Bacteria 1628
103 nmdc:mga00v17_4341_c1 3300050491 Bacteria 6363
104 Ga0500641_0003448 3300053096 Bacteria 5592
105 Ga0530510_0025631 3300061734 Bacteria 4217

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0000669 Ga0501034_0000669_20661_21848 394
2 3300005543 Ga0070672_100159586 Ga0070672_1001595861 397
3 3300028380 Ga0268265_10195157 Ga0268265_101951572 397
4 3300048917 Ga0496114_0061369 Ga0496114_0061369_44_1252 401
5 3300013308 Ga0157375_10185838 Ga0157375_101858382 402
6 3300049568 Ga0501031_0104758 Ga0501031_0104758_406_1704 404
7 3300017792 Ga0163161_10043652 Ga0163161_100436523 407
8 3300014325 Ga0163163_10356369 Ga0163163_103563691 410
9 3300011119 Ga0105246_10080901 Ga0105246_100809011 415
10 3300037418 Ga0395900_0162101 Ga0395900_0162101_897_2150 415
11 3300048926 Ga0496123_0077443 Ga0496123_0077443_115_1407 416
12 3300006051 Ga0075364_10008005 Ga0075364_100080052 418
13 3300050491 nmdc:mga00v17_4341_c1 nmdc:mga00v17_4341_c1_225_1532 418
14 3300042137 Ga0450902_000744 Ga0450902_000744_2180_3508 420
15 3300041405 Ga0439438_002839 Ga0439438_002839_2625_3953 422
16 3300042006 Ga0439432_003994 Ga0439432_003994_655_1983 422
17 3300042009 Ga0439451_017602 Ga0439451_017602_95_1423 422
18 3300042010 Ga0439452_003069 Ga0439452_003069_1481_2809 422
19 3300042016 Ga0439463_016910 Ga0439463_016910_280_1608 422
20 3300042146 Ga0450907_001597 Ga0450907_001597_66_1394 422
21 3300042461 Ga0439460_0000841 Ga0439460_0000841_2176_3504 422
22 3300041411 Ga0439466_0012125 Ga0439466_0012125_847_2175 423
23 3300031901 Ga0307406_10040806 Ga0307406_100408062 426
24 3300032004 Ga0307414_10092789 Ga0307414_100927892 426
25 3300041405 Ga0439438_005266 Ga0439438_005266_2015_3343 426
26 3300041407 Ga0439447_003688 Ga0439447_003688_2072_3400 426
27 3300041411 Ga0439466_0003464 Ga0439466_0003464_2657_3985 426
28 3300042006 Ga0439432_027474 Ga0439432_027474_398_1726 426
29 3300042010 Ga0439452_000129 Ga0439452_000129_53489_54817 426
30 3300049571 Ga0501034_0161097 Ga0501034_0161097_667_1995 429
31 3300031903 Ga0307407_10109326 Ga0307407_101093262 430
32 iso_pu_bacteria 2643221961 2645723028 430
33 3300038443 Ga0395901_0112624 Ga0395901_0112624_173_1471 431
34 3300049592 Ga0501076_0170003 Ga0501076_0170003_465_1766 432
35 3300049656 Ga0501209_017869 Ga0501209_017869_266_1567 432
36 3300053096 Ga0500641_0003448 Ga0500641_0003448_2562_3917 432
37 3300042002 Ga0439442_000082 Ga0439442_000082_17319_18626 434
38 3300042006 Ga0439432_014474 Ga0439432_014474_335_1642 434
39 3300042007 Ga0439449_0015094 Ga0439449_0015094_1288_2595 434
40 3300042122 Ga0450920_000069 Ga0450920_000069_3250_4557 434
41 3300042146 Ga0450907_000442 Ga0450907_000442_3367_4674 434
42 3300042435 Ga0439434_0000385 Ga0439434_0000385_8254_9561 434
43 3300042531 Ga0450918_000532 Ga0450918_000532_6290_7597 434
44 iso_pu_bacteria 651053060 651175834 434
45 3300049588 Ga0501072_0140564 Ga0501072_0140564_425_1741 437
46 3300061734 Ga0530510_0025631 Ga0530510_0025631_1004_2320 437
47 iso_pu_bacteria 3007252601 3007256590 437
48 iso_pu_bacteria 640427133 640487888 437
49 3300025945 Ga0207679_10196721 Ga0207679_101967212 438
50 iso_pu_bacteria 2643221561 2643826206 438
51 iso_pu_bacteria 2643221696 2644532181 438
52 3300046501 Ga0495607_0052552 Ga0495607_0052552_638_1966 441
53 3300046506 Ga0495583_0001538 Ga0495583_0001538_11063_12391 441
54 3300046512 Ga0495610_0007401 Ga0495610_0007401_3851_5179 441
55 3300046515 Ga0495620_0002221 Ga0495620_0002221_7821_9149 441
56 3300046530 Ga0495654_0000804 Ga0495654_0000804_10478_11806 441
57 3300046530 Ga0495654_0021613 Ga0495654_0021613_1843_3171 441
58 3300047470 Ga0495681_0006880 Ga0495681_0006880_2182_3510 441
59 3300005456 Ga0070678_100061261 Ga0070678_1000612611 442
60 3300005981 Ga0081538_10000469 Ga0081538_1000046930 442
61 3300026121 Ga0207683_10035526 Ga0207683_100355263 442
62 iso_pu_bacteria 8025413630 8025418293 442
63 iso_pu_bacteria 2643221697 2644536972 443
64 iso_pu_bacteria 2811994874 2812333245 443
65 iso_pu_bacteria 2984592036 2984594231 443
66 3300031852 Ga0307410_10023166 Ga0307410_100231662 445
67 iso_pu_bacteria 3006425503 3006430319 445
68 3300031995 Ga0307409_100017559 Ga0307409_1000175594 446
69 iso_pu_bacteria 2643221681 2644456428 446
70 iso_pu_bacteria 2643221962 2645725983 446
71 iso_pu_bacteria 2848551377 2848553796 448
72 iso_pu_bacteria 2738543034 2739365646 450
73 iso_pu_bacteria 2939598168 2939599080 451
74 3300032002 Ga0307416_100201377 Ga0307416_1002013771 452
75 3300049575 Ga0501039_0156487 Ga0501039_0156487_191_1567 453
76 3300031852 Ga0307410_10171898 Ga0307410_101718981 457
77 iso_pu_bacteria 8054107350 8054108864 458
78 3300031731 Ga0307405_10086835 Ga0307405_100868352 459
79 iso_pu_bacteria 2945941187 2945941870 459
80 iso_pu_bacteria 2857740372 2857744561 460
81 3300003578 Ga0006562J51391_1013664 Ga0006562J51391_10136641 462
82 3300006058 Ga0075432_10002241 Ga0075432_100022415 462
83 3300031548 Ga0307408_100023796 Ga0307408_1000237962 462
84 3300031852 Ga0307410_10019008 Ga0307410_100190083 462
85 3300031995 Ga0307409_100021502 Ga0307409_1000215024 462
86 3300032002 Ga0307416_100011516 Ga0307416_1000115165 462
87 3300032005 Ga0307411_10010251 Ga0307411_100102515 462
88 3300011119 Ga0105246_10129856 Ga0105246_101298562 463
89 iso_pu_bacteria 2945941187 2945943422 463
90 3300011119 Ga0105246_10044267 Ga0105246_100442671 464
91 3300049579 Ga0501043_0013960 Ga0501043_0013960_942_2363 464
92 3300025315 Ga0207697_10007513 Ga0207697_100075134 466
93 iso_pu_bacteria 2904497146 2904500676 468
94 iso_pu_bacteria 2933418574 2933421975 468
95 3300031548 Ga0307408_100078712 Ga0307408_1000787123 469
96 3300031911 Ga0307412_10110818 Ga0307412_101108182 470
97 3300032126 Ga0307415_100037019 Ga0307415_1000370192 470
98 3300042007 Ga0439449_0024777 Ga0439449_0024777_681_2096 470
99 3300037312 Ga0395899_0094718 Ga0395899_0094718_672_2090 471
100 3300037418 Ga0395900_0144364 Ga0395900_0144364_404_1822 471
101 3300049574 Ga0501038_0028900 Ga0501038_0028900_1149_2606 471
102 iso_pu_bacteria 2844849076 2844850677 472
103 iso_pu_bacteria 2808606370 2808892354 473
104 iso_pu_bacteria 2939647034 2939648045 473
105 iso_pu_bacteria 2945920336 2945921841 473
106 iso_pu_bacteria 2946037020 2946037912 473
107 iso_pu_bacteria 2953998280 2953999198 473
108 3300011119 Ga0105246_10006961 Ga0105246_100069615 474
109 3300031731 Ga0307405_10009606 Ga0307405_100096067 474
110 3300031824 Ga0307413_10011273 Ga0307413_100112732 474
111 3300031852 Ga0307410_10085552 Ga0307410_100855522 474
112 3300031901 Ga0307406_10011170 Ga0307406_100111702 474
113 3300031903 Ga0307407_10002502 Ga0307407_100025023 474
114 3300031911 Ga0307412_10168197 Ga0307412_101681971 474
115 3300032005 Ga0307411_10004458 Ga0307411_100044583 474
116 3300032126 Ga0307415_100006905 Ga0307415_1000069054 474
117 3300049569 Ga0501032_0000782 Ga0501032_0000782_20797_22278 474
118 3300049579 Ga0501043_0044224 Ga0501043_0044224_1187_2668 474
119 iso_pu_bacteria 2919059106 2919060693 474
120 iso_pu_bacteria 2974302888 2974305907 474
121 3300031548 Ga0307408_100012613 Ga0307408_1000126133 475
122 3300031731 Ga0307405_10009085 Ga0307405_100090855 475
123 3300031824 Ga0307413_10001966 Ga0307413_100019662 475
124 3300031901 Ga0307406_10021872 Ga0307406_100218722 475
125 3300031901 Ga0307406_10031690 Ga0307406_100316903 475
126 3300031903 Ga0307407_10026077 Ga0307407_100260773 475
127 3300031911 Ga0307412_10143023 Ga0307412_101430232 475
128 3300031995 Ga0307409_100001899 Ga0307409_10000189910 475
129 3300032002 Ga0307416_100017936 Ga0307416_1000179362 475
130 3300032004 Ga0307414_10004912 Ga0307414_100049122 475
131 3300032005 Ga0307411_10026795 Ga0307411_100267953 475
132 3300002773 JGI25152J39213_1000286 JGI25152J39213_100028627 476
133 3300025258 Ga0209129_1000130 Ga0209129_10001307 476
134 3300025294 Ga0209025_1000369 Ga0209025_100036973 476
135 3300032002 Ga0307416_100134939 Ga0307416_1001349392 476

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02386

TrkH

Cation transport protein

37

483

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7zp9-assembly1.cif.gz_I ktrab complex - ktra8 ring with a ktrb dimer on each side 0.9219 42 476
7zp9-assembly1.cif.gz_M ktrab complex - ktra8 ring with a ktrb dimer on each side 0.9066 42 476
7zpo-assembly1.cif.gz_M native ktrab complex 0.9033 43 476
7zp9-assembly1.cif.gz_I ktrab complex - ktra8 ring with a ktrb dimer on each side 0.8931 42 476
7zp9-assembly1.cif.gz_M ktrab complex - ktra8 ring with a ktrb dimer on each side 0.8786 42 476
ID Description Score Start End Superfamily
af_A0A0R0LDQ5_171_399_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8543 154 332 1.10.287.70
af_Q6H501_172_304_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8365 148 235 1.10.287.70
af_Q0JNB6_199_319_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8355 155 245 1.10.287.70
af_A0A1D6E031_174_402_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8229 154 332 1.10.287.70
af_Q7XPF7_145_272_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7891 154 245 1.10.287.70
ID Description Score Start End GO Terms
AF-A0A3D2SLE5-F1-model_v4 Potassium transporter TrkH 0.9476 149 449 GO:0005886
GO:0008324
GO:0030001
AF-A0A1E8FMT4-F1-model_v4 ATPase 0.9453 36 476 GO:0005886
GO:0008324
GO:0030001
AF-A0A3D2SLE5-F1-model_v4 Potassium transporter TrkH 0.9446 149 449 GO:0005886
GO:0008324
GO:0030001
AF-A0A1E8FMT4-F1-model_v4 ATPase 0.9411 36 476 GO:0005886
GO:0008324
GO:0030001
AF-A0A3D2HZG6-F1-model_v4 Potassium uptake protein, TrkH family 0.9398 235 405 GO:0005886
GO:0008324
GO:0030001

Feature Viewer

pLDDT pTM Quality
79.69 0.81 High
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Predicted Structure (AlphaFold2)

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