F164232

General Info

Members Datasets Scaffolds Average Seq Length
135 95 122 583

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0000610|Ga0451576_0000610_50620_52431
Length 561
Sequence MAPPLLALQDIALTFGATPLLRSAALAVGEGERIALVGRNGAGKSTLLRIAAGLIQQDGGTRFLQPGATLRYLPQGADLSGFETVGAYAEAGLGPGDDPYRARYLLEQLGLTGEERTAALSGGEARRAALARALAPTPDILLLDEPTNHLDLPAITWLEDELRAFRGALVLISHDRRFLERLSRSMVWLDRGETRRLDQGFSAFEAWRDEVLAQEEAEAHKLGRKIAREEDWVRYGVTARRKRNVRRMAELGALREKRRTRVIPVGRTAASATEAAGSGSLVIAADAITKRYGDRAVVLGFTTRIMRGDRVGIVGPNGAGKTTLLAMLTGALAPDEGSVKLGTGLAMVTLDQGRASLDPMTSLADTLTGGGDMVRVGDAPRHVMGYLKDFLFMPEQAQTPVGKLSGGEQARVLLARALAAPSNLLVLDEPTNDLDLETLDLLQELLAEYKGTVIVVSHDRDFLDRVATSVIMSEGEGRWQEYAGGYSDMLAQRGEGVAARVVQAPRRPDERAEAPAERRAQDQRRKLTMAQQHALKTLPGRIEGLGAWLEIALLAEEIGAG

Samples

Sample ID Description Type Environment
1 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
2 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
3 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
4 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
5 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
6 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
7 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
8 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
9 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
10 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
49 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
50 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
53 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
54 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
57 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
58 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
59 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
62 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
63 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
64 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
65 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
66 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
67 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
68 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
69 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
70 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
71 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
72 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
73 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
74 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
75 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
81 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
82 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
83 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
85 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
86 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
87 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
88 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
89 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
90 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
91 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
92 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
93 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
94 8002060224 Methylocystis sp. Sn-Cys Isolate Unclassified
95 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.37
Metatranscriptomes 0
Isolates 9.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.19
Nodule 0.74
Rhizoplane 5.19
Rhizosphere 76.3
Stem 0
Stem Tuber 0
Unclassified 12.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10003240 3300003203 Bacteria 7660
2 rootH2_10002097 3300003320 Bacteria 44862
3 Ga0070658_10066138 3300005327 Bacteria 2952
4 Ga0070661_100000560 3300005344 Bacteria 28396
5 Ga0070668_100005721 3300005347 Bacteria 9217
6 Ga0070659_100025394 3300005366 Bacteria 4550
7 Ga0070659_100029030 3300005366 Bacteria 4274
8 Ga0070679_100013979 3300005530 Bacteria 7694
9 Ga0068853_100020594 3300005539 Bacteria 5485
10 Ga0068855_100021229 3300005563 Bacteria 7786
11 Ga0068855_100104535 3300005563 Bacteria 3257
12 Ga0068852_100086234 3300005616 Bacteria 2798
13 Ga0081455_10001084 3300005937 Bacteria 34274
14 Ga0081540_1000090 3300005983 Bacteria 95488
15 Ga0081540_1018815 3300005983 Bacteria 4222
16 Ga0081539_10000248 3300005985 Bacteria 125908
17 Ga0070712_100002867 3300006175 Bacteria 10680
18 Ga0070712_100027227 3300006175 Bacteria 3816
19 Ga0075362_10001563 3300006177 Bacteria 7398
20 Ga0075362_10002477 3300006177 Bacteria 6211
21 Ga0105240_10017713 3300009093 Bacteria 9591
22 Ga0105240_10018391 3300009093 Bacteria 9383
23 Ga0105240_10023411 3300009093 Bacteria 8167
24 Ga0105240_10035360 3300009093 Bacteria 6440
25 Ga0105240_10097842 3300009093 Bacteria 3575
26 Ga0105241_10012527 3300009174 Bacteria 6218
27 Ga0105241_10047752 3300009174 Bacteria 3256
28 Ga0105248_10000013 3300009177 Bacteria 328864
29 Ga0105238_10148665 3300009551 Bacteria 2319
30 Ga0105239_10026576 3300010375 Bacteria 6371
31 Ga0157370_10081443 3300013104 Bacteria 3046
32 Ga0157369_10090508 3300013105 Bacteria 3267
33 Ga0157372_10006144 3300013307 Bacteria 12762
34 Ga0157372_10027486 3300013307 Bacteria 6197
35 Ga0157379_10001511 3300014968 Bacteria 19143
36 Ga0157379_10005129 3300014968 Bacteria 11238
37 Ga0207654_10014944 3300025911 Bacteria 4018
38 Ga0207707_10011405 3300025912 Bacteria 7739
39 Ga0207695_10004959 3300025913 Bacteria 17922
40 Ga0207695_10052365 3300025913 Bacteria 4277
41 Ga0207695_10186710 3300025913 Bacteria 1992
42 Ga0207693_10003278 3300025915 Bacteria 13860
43 Ga0207693_10034193 3300025915 Bacteria 4010
44 Ga0207657_10000556 3300025919 Bacteria 39732
45 Ga0207657_10002691 3300025919 Bacteria 19155
46 Ga0207649_10000078 3300025920 Bacteria 82996
47 Ga0207652_10027361 3300025921 Bacteria 4751
48 Ga0207711_10000003 3300025941 Bacteria 1042791
49 Ga0207711_10000005 3300025941 Bacteria 822972
50 Ga0207711_10000015 3300025941 Bacteria 494097
51 Ga0207667_10058513 3300025949 Bacteria 4041
52 Ga0207640_10111596 3300025981 Bacteria 1939
53 Ga0207641_10027259 3300026088 Bacteria 4719
54 Ga0207674_10002282 3300026116 Bacteria 24314
55 Ga0207674_10030105 3300026116 Bacteria 5710
56 Ga0265318_10000089 3300028577 Bacteria 82410
57 Ga0265338_10000014 3300028800 Bacteria 378751
58 Ga0265338_10025952 3300028800 Bacteria 5924
59 Ga0265328_10000178 3300031239 Bacteria 29493
60 Ga0265328_10001680 3300031239 Bacteria 10134
61 Ga0265328_10011099 3300031239 Bacteria 3608
62 Ga0265320_10001085 3300031240 Bacteria 20069
63 Ga0265325_10000008 3300031241 Bacteria 186174
64 Ga0265325_10000490 3300031241 Bacteria 28750
65 Ga0265339_10000142 3300031249 Bacteria 59904
66 Ga0265339_10003953 3300031249 Bacteria 10250
67 Ga0265331_10000005 3300031250 Bacteria 465192
68 Ga0265331_10000155 3300031250 Bacteria 87564
69 Ga0265331_10000797 3300031250 Bacteria 26186
70 Ga0265331_10001311 3300031250 Bacteria 18450
71 Ga0265331_10002821 3300031250 Bacteria 11519
72 Ga0265331_10020518 3300031250 Bacteria 3391
73 Ga0265327_10000007 3300031251 Bacteria 678515
74 Ga0265327_10009347 3300031251 Bacteria 7087
75 Ga0265313_10004377 3300031595 Bacteria 10900
76 Ga0265313_10009465 3300031595 Bacteria 6324
77 Ga0265313_10018908 3300031595 Bacteria 3854
78 Ga0265314_10001869 3300031711 Bacteria 22577
79 Ga0265342_10046478 3300031712 Bacteria 2609
80 Ga0307516_10059121 3300031730 Bacteria 3729
81 Ga0307414_10063759 3300032004 Bacteria 2620
82 Ga0373937_0059976 3300036401 Bacteria 3497
83 Ga0395900_0058587 3300037418 Bacteria 3965
84 Ga0395898_0009589 3300037466 Bacteria 10167
85 Ga0436363_0748814 3300039450 Bacteria 3974
86 Ga0451576_0000610 3300045051 Bacteria 75235
87 Ga0451576_0010988 3300045051 Bacteria 10342
88 Ga0495592_0113153 3300046454 Bacteria 1918
89 Ga0496104_0005605 3300048907 Bacteria 10989
90 Ga0496104_0079252 3300048907 Bacteria 3130
91 Ga0496105_0000060 3300048908 Bacteria 86019
92 Ga0496105_0027479 3300048908 Bacteria 4649
93 Ga0496109_0097236 3300048912 Bacteria 2729
94 Ga0496110_0045648 3300048913 Bacteria 3831
95 Ga0496112_0020243 3300048915 Bacteria 6301
96 Ga0496119_0011465 3300048922 Bacteria 7334
97 Ga0496121_0002408 3300048924 Bacteria 28667
98 Ga0496121_0057961 3300048924 Bacteria 3206
99 Ga0496122_0031625 3300048925 Bacteria 4398
100 Ga0496123_0005019 3300048926 Bacteria 13548
101 Ga0496126_0001557 3300048929 Bacteria 35204
102 Ga0501033_0071607 3300049570 Bacteria 2546
103 Ga0501036_0147208 3300049572 Bacteria 1987
104 Ga0501038_0035517 3300049574 Bacteria 4376
105 Ga0501043_0018252 3300049579 Bacteria 5500
106 Ga0501047_0173306 3300049581 Bacteria 2026
107 Ga0501070_0000075 3300049586 Bacteria 84188
108 Ga0501072_0002422 3300049588 Bacteria 13965
109 Ga0501080_0002868 3300049742 Bacteria 15165
110 Ga0501035_0000741 3300049822 Bacteria 35180
111 Ga0501035_0081208 3300049822 Bacteria 2861
112 Ga0501044_0001515 3300049823 Bacteria 27243
113 Ga0501044_0031596 3300049823 Bacteria 5572
114 Ga0501044_0043297 3300049823 Bacteria 4678
115 Ga0501044_0128709 3300049823 Bacteria 2527
116 nmdc:mga03683_9769_c1 3300050489 Bacteria 3423
117 nmdc:mga03n38_12327_c1 3300050490 Bacteria 3213
118 nmdc:mga0yw44_17992_c1 3300050492 Bacteria 3861
119 Ga0495619_0052762 3300053085 Bacteria 2688
120 Ga0500556_0001173 3300053104 Bacteria 12502
121 Ga0500645_021688 3300053730 Bacteria 1981
122 Ga0501082_0138026 3300060353 Bacteria 2116

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031250 Ga0265331_10000797 Ga0265331_100007975 483
2 3300031251 Ga0265327_10000007 Ga0265327_10000007316 483
3 3300009093 Ga0105240_10035360 Ga0105240_100353605 497
4 3300005983 Ga0081540_1018815 Ga0081540_10188153 498
5 3300031250 Ga0265331_10001311 Ga0265331_100013117 500
6 3300031251 Ga0265327_10009347 Ga0265327_100093474 500
7 3300046454 Ga0495592_0113153 Ga0495592_0113153_13_1860 500
8 3300048922 Ga0496119_0011465 Ga0496119_0011465_2954_4762 500
9 3300048925 Ga0496122_0031625 Ga0496122_0031625_45_1853 500
10 3300048926 Ga0496123_0005019 Ga0496123_0005019_8869_10677 500
11 3300053085 Ga0495619_0052762 Ga0495619_0052762_198_2045 500
12 3300053104 Ga0500556_0001173 Ga0500556_0001173_8802_10610 500
13 3300053730 Ga0500645_021688 Ga0500645_021688_133_1941 500
14 3300005983 Ga0081540_1000090 Ga0081540_100009061 501
15 3300049822 Ga0501035_0081208 Ga0501035_0081208_37_1857 501
16 3300049823 Ga0501044_0031596 Ga0501044_0031596_3352_5172 501
17 3300031239 Ga0265328_10001680 Ga0265328_100016809 502
18 3300009174 Ga0105241_10047752 Ga0105241_100477523 505
19 3300014968 Ga0157379_10001511 Ga0157379_1000151115 505
20 3300025911 Ga0207654_10014944 Ga0207654_100149444 505
21 3300031239 Ga0265328_10011099 Ga0265328_100110992 505
22 3300031250 Ga0265331_10000005 Ga0265331_10000005290 505
23 3300049588 Ga0501072_0002422 Ga0501072_0002422_8778_10589 505
24 3300005347 Ga0070668_100005721 Ga0070668_1000057212 506
25 3300006175 Ga0070712_100027227 Ga0070712_1000272272 506
26 3300013307 Ga0157372_10006144 Ga0157372_100061447 506
27 3300025915 Ga0207693_10034193 Ga0207693_100341932 506
28 3300031241 Ga0265325_10000490 Ga0265325_1000049027 506
29 3300031249 Ga0265339_10003953 Ga0265339_100039538 506
30 3300031250 Ga0265331_10020518 Ga0265331_100205182 506
31 3300031595 Ga0265313_10004377 Ga0265313_100043777 506
32 3300031595 Ga0265313_10018908 Ga0265313_100189082 506
33 3300009177 Ga0105248_10000013 Ga0105248_10000013269 507
34 3300031239 Ga0265328_10000178 Ga0265328_1000017820 507
35 3300045051 Ga0451576_0000610 Ga0451576_0000610_50620_52431 507
36 3300048924 Ga0496121_0057961 Ga0496121_0057961_603_2417 507
37 3300005327 Ga0070658_10066138 Ga0070658_100661382 508
38 3300005344 Ga0070661_100000560 Ga0070661_10000056012 508
39 3300005366 Ga0070659_100029030 Ga0070659_1000290302 508
40 3300005530 Ga0070679_100013979 Ga0070679_1000139796 508
41 3300005616 Ga0068852_100086234 Ga0068852_1000862342 508
42 3300009093 Ga0105240_10018391 Ga0105240_100183912 508
43 3300009174 Ga0105241_10012527 Ga0105241_100125275 508
44 3300009551 Ga0105238_10148665 Ga0105238_101486652 508
45 3300013307 Ga0157372_10027486 Ga0157372_100274864 508
46 3300025919 Ga0207657_10002691 Ga0207657_100026916 508
47 3300025920 Ga0207649_10000078 Ga0207649_1000007859 508
48 3300025921 Ga0207652_10027361 Ga0207652_100273614 508
49 3300025941 Ga0207711_10000003 Ga0207711_10000003268 508
50 3300025941 Ga0207711_10000005 Ga0207711_10000005868 508
51 3300025941 Ga0207711_10000015 Ga0207711_1000001521 508
52 3300026116 Ga0207674_10002282 Ga0207674_1000228215 508
53 3300060353 Ga0501082_0138026 Ga0501082_0138026_212_2023 508
54 iso_pu_bacteria 2829745981 2829748381 508
55 3300005937 Ga0081455_10001084 Ga0081455_1000108419 509
56 3300045051 Ga0451576_0010988 Ga0451576_0010988_4368_6182 509
57 3300009093 Ga0105240_10097842 Ga0105240_100978423 510
58 3300049572 Ga0501036_0147208 Ga0501036_0147208_152_1954 510
59 3300049579 Ga0501043_0018252 Ga0501043_0018252_1343_3145 510
60 3300049581 Ga0501047_0173306 Ga0501047_0173306_36_1838 510
61 3300049586 Ga0501070_0000075 Ga0501070_0000075_30452_32254 510
62 3300049742 Ga0501080_0002868 Ga0501080_0002868_11986_13788 510
63 3300049822 Ga0501035_0000741 Ga0501035_0000741_29315_31117 510
64 3300049823 Ga0501044_0001515 Ga0501044_0001515_8547_10349 510
65 iso_pu_bacteria 2919450847 2919453386 510
66 iso_pu_bacteria 2937843397 2937845092 510
67 iso_pu_bacteria 643348555 643393039 510
68 iso_pu_bacteria 8001845381 8001850786 510
69 iso_pu_bacteria 2508501114 2509078592 511
70 iso_pu_bacteria 2738543031 2739349090 511
71 iso_pu_bacteria 2775506901 2776259475 511
72 iso_pu_bacteria 2842775625 2842780159 511
73 iso_pu_bacteria 2883577096 2883579193 511
74 iso_pu_bacteria 2929199973 2929203020 511
75 iso_pu_bacteria 8002060224 8002060311 511
76 iso_pu_bacteria 8055909800 8055912833 511
77 3300005366 Ga0070659_100025394 Ga0070659_1000253941 512
78 3300005539 Ga0068853_100020594 Ga0068853_1000205942 512
79 3300005563 Ga0068855_100104535 Ga0068855_1001045352 512
80 3300013104 Ga0157370_10081443 Ga0157370_100814433 512
81 3300025912 Ga0207707_10011405 Ga0207707_100114055 512
82 3300025919 Ga0207657_10000556 Ga0207657_1000055635 512
83 3300025949 Ga0207667_10058513 Ga0207667_100585134 512
84 3300025981 Ga0207640_10111596 Ga0207640_101115961 512
85 3300026088 Ga0207641_10027259 Ga0207641_100272592 512
86 3300005563 Ga0068855_100021229 Ga0068855_1000212296 513
87 3300006177 Ga0075362_10002477 Ga0075362_100024775 513
88 3300009093 Ga0105240_10017713 Ga0105240_100177134 513
89 3300010375 Ga0105239_10026576 Ga0105239_100265766 513
90 3300013105 Ga0157369_10090508 Ga0157369_100905082 513
91 3300025913 Ga0207695_10004959 Ga0207695_100049591 513
92 3300026116 Ga0207674_10030105 Ga0207674_100301052 513
93 3300028577 Ga0265318_10000089 Ga0265318_100000896 513
94 3300031241 Ga0265325_10000008 Ga0265325_10000008144 513
95 3300031249 Ga0265339_10000142 Ga0265339_1000014231 513
96 3300031250 Ga0265331_10002821 Ga0265331_100028219 513
97 3300031595 Ga0265313_10009465 Ga0265313_100094654 513
98 3300037418 Ga0395900_0058587 Ga0395900_0058587_1714_3519 513
99 3300037466 Ga0395898_0009589 Ga0395898_0009589_1107_2912 513
100 3300048924 Ga0496121_0002408 Ga0496121_0002408_19628_21427 513
101 3300049570 Ga0501033_0071607 Ga0501033_0071607_421_2229 513
102 3300049574 Ga0501038_0035517 Ga0501038_0035517_1493_3301 513
103 3300049823 Ga0501044_0128709 Ga0501044_0128709_264_2072 513
104 3300050489 nmdc:mga03683_9769_c1 nmdc:mga03683_9769_c1_585_2387 513
105 3300050490 nmdc:mga03n38_12327_c1 nmdc:mga03n38_12327_c1_426_2228 513
106 3300003203 JGI25406J46586_10003240 JGI25406J46586_100032405 514
107 3300003320 rootH2_10002097 rootH2_1000209717 514
108 3300005985 Ga0081539_10000248 Ga0081539_100002483 514
109 3300006175 Ga0070712_100002867 Ga0070712_10000286710 514
110 3300006177 Ga0075362_10001563 Ga0075362_100015636 514
111 3300009093 Ga0105240_10023411 Ga0105240_100234115 514
112 3300014968 Ga0157379_10005129 Ga0157379_1000512912 514
113 3300025913 Ga0207695_10052365 Ga0207695_100523653 514
114 3300025913 Ga0207695_10186710 Ga0207695_101867101 514
115 3300025915 Ga0207693_10003278 Ga0207693_100032785 514
116 3300028800 Ga0265338_10000014 Ga0265338_1000001430 514
117 3300028800 Ga0265338_10025952 Ga0265338_100259523 514
118 3300031240 Ga0265320_10001085 Ga0265320_1000108513 514
119 3300031250 Ga0265331_10000155 Ga0265331_1000015536 514
120 3300031711 Ga0265314_10001869 Ga0265314_1000186921 514
121 3300031712 Ga0265342_10046478 Ga0265342_100464782 514
122 3300031730 Ga0307516_10059121 Ga0307516_100591211 514
123 3300032004 Ga0307414_10063759 Ga0307414_100637591 514
124 3300036401 Ga0373937_0059976 Ga0373937_0059976_990_2801 514
125 3300039450 Ga0436363_0748814 Ga0436363_0748814_1868_3682 514
126 3300048907 Ga0496104_0005605 Ga0496104_0005605_4527_6338 514
127 3300048907 Ga0496104_0079252 Ga0496104_0079252_693_2504 514
128 3300048908 Ga0496105_0000060 Ga0496105_0000060_33666_35477 514
129 3300048908 Ga0496105_0027479 Ga0496105_0027479_2448_4259 514
130 3300048912 Ga0496109_0097236 Ga0496109_0097236_806_2617 514
131 3300048913 Ga0496110_0045648 Ga0496110_0045648_1179_2990 514
132 3300048915 Ga0496112_0020243 Ga0496112_0020243_3043_4854 514
133 3300048929 Ga0496126_0001557 Ga0496126_0001557_11211_13013 514
134 3300049823 Ga0501044_0043297 Ga0501044_0043297_1404_3239 514
135 3300050492 nmdc:mga0yw44_17992_c1 nmdc:mga0yw44_17992_c1_523_2343 514

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

21

148

0.91

PF00005

ABC_tran

ABC transporter

299

432

0.78

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pLDDT pTM Quality
83.77 0.47 Low
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Predicted Structure (AlphaFold2)

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