F162283

General Info

Members Datasets Scaffolds Average Seq Length
135 100 270 876

Family's Representative Sequence

Representative Sequence 3300005347|Ga0070668_100015164|Ga0070668_1000151642
Length 941
Sequence MVSGIVARARSMWRGVRQRRGVEADMNDEFRLHVELRAADLVRSGLSPAAAARQAKLEFGSTERYKEDGRRSRGLRRVDDLRMSWLDFKLGFRMLVRYPGLTLVGGLAMAFAIWIGAGAFELATQIIRPSLPLPAGSEIVAIRNWDVAANQPEPHIAHDLATWRETLTSVTELGAYRALERNLIIGNGRGEPVEVAEITASAFRLTRVPPLMGRTLIESDERPGAPPAVVVGYDAWQARFGGDTAVVGKTVRLARSAVTVVGVMPKGFAFPVAQSFWVPLRLDAASYARREGPAISAFARLAPGTSLDEARAELTALGKRASIEFRDTHEHLRPQIMPYAKSIVNISGWRSVGVMSVNLPLLMLVALICGNVALLMFARAATRESEIIVRSALGAGRGRIIMQLFAEALVLGGVAAVVGLAAARSGLAWVMGVVEAEFLHGARLPFWFQSRLSPTTLLYAALLTIIAAAIAGIMPALKVTRGVGARLRQASAGSGGLRFGGVWTVVIVTQVAVTVAFPAVAFFVRRDAVQIEQVDVGFPTSQYLSARLEMDRDPPSAAPADTTRAAFAARFRTTYQELERRIAAEPNVRRIAFADRLPLMYHPHRLIAVDAGGAAPLHPAWPAGYRVSSASVSPSYFDAVDAPILTGRGFLASDHAVDLGEPGEPGARGGVVIVNRSFVNLVLGGRNPIGRRIQYVELEEWDGPRPPSESKAPWYEIVGVVRDLGMAVGSDGPAPSNNPESSKQAAGGDPKVAGIYHPVAPGGVYPAHMGIRVSGDPAAFAPRLRAIATEIDPTLRLYAVTPLSNVTESELQFLNFWFRMLLGVAAIALVLSLAGIYAVMSFTVARRTREIGVRIALGASHRRVATAIFRRPLTQVALGVLAGGVLVVLMTRAIAGELSATEAALVVAYVIAMMGICLVACIVPTRRAFRIEPTEALRAES

Samples

Sample ID Description Type Environment
1 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
68 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
69 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
73 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
76 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
77 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
90 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
91 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
95 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
96 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
97 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
98 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
99 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
100 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.74
Rhizosphere 95.56
Stem 0
Stem Tuber 0
Unclassified 5.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070668_100015164 3300005347 Bacteria 5759
2 Ga0070658_10001412 3300005327 Bacteria 20535
3 Ga0070676_10001013 3300005328 Bacteria 13934
4 Ga0070690_100011574 3300005330 Bacteria 5164
5 Ga0070670_100037833 3300005331 Bacteria 4150
6 Ga0068869_100012820 3300005334 Bacteria 5548
7 Ga0068869_100041198 3300005334 Bacteria 3306
8 Ga0070680_100000041 3300005336 Bacteria 66075
9 Ga0070680_100054063 3300005336 Bacteria 3278
10 Ga0070660_100043421 3300005339 Bacteria 3435
11 Ga0070689_100029483 3300005340 Unclassified 4154
12 Ga0070687_100014190 3300005343 Bacteria 3573
13 Ga0070668_100002590 3300005347 Bacteria 13289
14 Ga0070669_100002387 3300005353 Bacteria 13592
15 Ga0070675_100008161 3300005354 Bacteria 8114
16 Ga0070667_100055875 3300005367 Bacteria 3334
17 Ga0070700_100020473 3300005441 Bacteria 3832
18 Ga0070662_100000431 3300005457 Bacteria 24792
19 Ga0070681_10062326 3300005458 Bacteria 3702
20 Ga0070698_100000311 3300005471 Bacteria 49357
21 Ga0070699_100055035 3300005518 Bacteria 3446
22 Ga0070684_100002124 3300005535 Bacteria 14621
23 Ga0070672_100006122 3300005543 Bacteria 8053
24 Ga0070672_100012084 3300005543 Bacteria 6043
25 Ga0070665_100065792 3300005548 Unclassified 3636
26 Ga0068857_100018282 3300005577 Bacteria 6149
27 Ga0068870_10002498 3300005840 Bacteria 7673
28 Ga0068858_100020482 3300005842 Bacteria 6182
29 Ga0068862_100005801 3300005844 Bacteria 10293
30 Ga0075428_100022282 3300006844 Bacteria 7013
31 Ga0075430_100002948 3300006846 Bacteria 14240
32 Ga0075430_100020907 3300006846 Bacteria 5564
33 Ga0075430_100044367 3300006846 Bacteria 3760
34 Ga0075430_100070315 3300006846 Bacteria 2936
35 Ga0075431_100014053 3300006847 Bacteria 8091
36 Ga0075433_10006283 3300006852 Bacteria 9382
37 Ga0075429_100004287 3300006880 Bacteria 12246
38 Ga0075429_100026534 3300006880 Bacteria 5032
39 Ga0111539_10004465 3300009094 Bacteria 18293
40 Ga0111539_10062214 3300009094 Bacteria 4420
41 Ga0111539_10101060 3300009094 Bacteria 3386
42 Ga0105245_10057307 3300009098 Bacteria 3504
43 Ga0114129_10000478 3300009147 Bacteria 48280
44 Ga0114129_10144827 3300009147 Bacteria 3255
45 Ga0105248_10087713 3300009177 Bacteria 3502
46 Ga0105249_10001294 3300009553 Bacteria 21904
47 Ga0105249_10003695 3300009553 Bacteria 13195
48 Ga0157369_10003940 3300013105 Bacteria 17611
49 Ga0157372_10005819 3300013307 Bacteria 13135
50 Ga0157375_10047557 3300013308 Unclassified 4191
51 Ga0163163_10000011 3300014325 Bacteria 264399
52 Ga0163163_10041468 3300014325 Bacteria 4501
53 Ga0157377_10000839 3300014745 Bacteria 12728
54 Ga0213876_10012077 3300021384 Bacteria 4600
55 Ga0213876_10012598 3300021384 Bacteria 4499
56 Ga0207645_10003212 3300025907 Bacteria 12499
57 Ga0207643_10009691 3300025908 Bacteria 5169
58 Ga0207705_10001660 3300025909 Bacteria 17688
59 Ga0207660_10000198 3300025917 Bacteria 38481
60 Ga0207662_10006566 3300025918 Bacteria 6280
61 Ga0207662_10016829 3300025918 Bacteria 4129
62 Ga0207657_10014761 3300025919 Bacteria 7606
63 Ga0207657_10033102 3300025919 Bacteria 4663
64 Ga0207652_10010249 3300025921 Bacteria 7543
65 Ga0207650_10034171 3300025925 Bacteria 3687
66 Ga0207659_10037650 3300025926 Bacteria 3360
67 Ga0207706_10000412 3300025933 Bacteria 45835
68 Ga0207706_10010231 3300025933 Bacteria 8582
69 Ga0207691_10014673 3300025940 Bacteria 7470
70 Ga0207691_10014728 3300025940 Bacteria 7454
71 Ga0207689_10001224 3300025942 Bacteria 24670
72 Ga0207689_10022694 3300025942 Bacteria 5272
73 Ga0207661_10011105 3300025944 Bacteria 6510
74 Ga0207661_10032355 3300025944 Bacteria 4051
75 Ga0207679_10019893 3300025945 Bacteria 4522
76 Ga0207712_10002401 3300025961 Bacteria 12133
77 Ga0207677_10012525 3300026023 Bacteria 4880
78 Ga0207708_10010697 3300026075 Bacteria 6818
79 Ga0207648_10029585 3300026089 Bacteria 4857
80 Ga0207676_10003636 3300026095 Bacteria 10909
81 Ga0207675_100007884 3300026118 Bacteria 10044
82 Ga0207428_10002809 3300027907 Bacteria 17301
83 Ga0268266_10011774 3300028379 Bacteria 7585
84 Ga0268265_10003247 3300028380 Bacteria 11802
85 Ga0307408_100003048 3300031548 Bacteria 11571
86 Ga0307410_10000259 3300031852 Bacteria 20190
87 Ga0307410_10002343 3300031852 Bacteria 9120
88 Ga0307406_10008921 3300031901 Bacteria 5606
89 Ga0307407_10010542 3300031903 Bacteria 4365
90 Ga0307412_10001171 3300031911 Bacteria 14999
91 Ga0307412_10004064 3300031911 Bacteria 8152
92 Ga0307409_100010004 3300031995 Bacteria 5864
93 Ga0307416_100001333 3300032002 Bacteria 13294
94 Ga0307414_10004658 3300032004 Bacteria 7470
95 Ga0307414_10007402 3300032004 Bacteria 6169
96 Ga0307414_10020406 3300032004 Bacteria 4130
97 Ga0307411_10032254 3300032005 Bacteria 3234
98 Ga0307411_10041002 3300032005 Bacteria 2942
99 Ga0307415_100014514 3300032126 Bacteria 4634
100 Ga0307415_100017117 3300032126 Bacteria 4339
101 Ga0373956_0003911 3300035119 Bacteria 5985
102 Ga0373957_0003061 3300035120 Bacteria 4873
103 Ga0373933_0006301 3300035724 Bacteria 6459
104 Ga0436365_1394990 3300039437 Bacteria 17910
105 Ga0436365_1524166 3300039437 Bacteria 12743
106 Ga0436365_1723899 3300039437 Bacteria 3977
107 Ga0466963_0021151 3300044694 Unclassified 4100
108 Ga0451576_0026367 3300045051 Bacteria 6252
109 Ga0495672_0004097 3300047320 Bacteria 12156
110 Ga0496108_0031264 3300048911 Bacteria 4416
111 Ga0501033_0025231 3300049570 Bacteria 4478
112 Ga0501034_0089861 3300049571 Bacteria 3069
113 Ga0501042_0011168 3300049578 Bacteria 6052
114 Ga0501047_0007442 3300049581 Bacteria 10304
115 Ga0501067_0021549 3300049583 Bacteria 3567
116 Ga0501070_0019652 3300049586 Bacteria 5664
117 Ga0501071_0004312 3300049587 Bacteria 9012
118 Ga0501075_0006232 3300049591 Bacteria 8200
119 Ga0501079_0060596 3300049741 Bacteria 2919
120 Ga0501035_0000365 3300049822 Bacteria 52161
121 Ga0501044_0000511 3300049823 Bacteria 47208
122 nmdc:mga05p37_138819_c1 3300050507 Unclassified 2979
123 nmdc:mga05p37_6625_c1 3300050507 Bacteria 13657
124 nmdc:mga09592_12709_c1 3300050508 Bacteria 6862
125 nmdc:mga09592_6084_c1 3300050508 Bacteria 9834
126 nmdc:mga0qj67_46178_c1 3300050509 Bacteria 3438
127 nmdc:mga0qj67_8743_c1 3300050509 Bacteria 7515
128 nmdc:mga06r32_12598_c1 3300050510 Bacteria 7638
129 nmdc:mga06r32_21440_c1 3300050510 Bacteria 5964
130 nmdc:mga06r32_45845_c1 3300050510 Unclassified 4170
131 nmdc:mga06r32_85213_c1 3300050510 Unclassified 3081
132 nmdc:mga08y16_2298_c1 3300050511 Bacteria 19561
133 nmdc:mga08y16_2901_c1 3300050511 Bacteria 17636
134 nmdc:mga0n895_5761_c1 3300050512 Bacteria 10399
135 nmdc:mga0a205_22969_c1 3300050515 Bacteria 5914
136 Ga0070668_100015164
137 Ga0070658_10001412
138 Ga0070676_10001013
139 Ga0070690_100011574
140 Ga0070670_100037833
141 Ga0068869_100012820
142 Ga0068869_100041198
143 Ga0070680_100000041
144 Ga0070680_100054063
145 Ga0070660_100043421
146 Ga0070689_100029483
147 Ga0070687_100014190
148 Ga0070668_100002590
149 Ga0070669_100002387
150 Ga0070675_100008161
151 Ga0070667_100055875
152 Ga0070700_100020473
153 Ga0070662_100000431
154 Ga0070681_10062326
155 Ga0070698_100000311
156 Ga0070699_100055035
157 Ga0070684_100002124
158 Ga0070672_100006122
159 Ga0070672_100012084
160 Ga0070665_100065792
161 Ga0068857_100018282
162 Ga0068870_10002498
163 Ga0068858_100020482
164 Ga0068862_100005801
165 Ga0075428_100022282
166 Ga0075430_100002948
167 Ga0075430_100020907
168 Ga0075430_100044367
169 Ga0075430_100070315
170 Ga0075431_100014053
171 Ga0075433_10006283
172 Ga0075429_100004287
173 Ga0075429_100026534
174 Ga0111539_10004465
175 Ga0111539_10062214
176 Ga0111539_10101060
177 Ga0105245_10057307
178 Ga0114129_10000478
179 Ga0114129_10144827
180 Ga0105248_10087713
181 Ga0105249_10001294
182 Ga0105249_10003695
183 Ga0157369_10003940
184 Ga0157372_10005819
185 Ga0157375_10047557
186 Ga0163163_10000011
187 Ga0163163_10041468
188 Ga0157377_10000839
189 Ga0213876_10012077
190 Ga0213876_10012598
191 Ga0207645_10003212
192 Ga0207643_10009691
193 Ga0207705_10001660
194 Ga0207660_10000198
195 Ga0207662_10006566
196 Ga0207662_10016829
197 Ga0207657_10014761
198 Ga0207657_10033102
199 Ga0207652_10010249
200 Ga0207650_10034171
201 Ga0207659_10037650
202 Ga0207706_10000412
203 Ga0207706_10010231
204 Ga0207691_10014673
205 Ga0207691_10014728
206 Ga0207689_10001224
207 Ga0207689_10022694
208 Ga0207661_10011105
209 Ga0207661_10032355
210 Ga0207679_10019893
211 Ga0207712_10002401
212 Ga0207677_10012525
213 Ga0207708_10010697
214 Ga0207648_10029585
215 Ga0207676_10003636
216 Ga0207675_100007884
217 Ga0207428_10002809
218 Ga0268266_10011774
219 Ga0268265_10003247
220 Ga0307408_100003048
221 Ga0307410_10000259
222 Ga0307410_10002343
223 Ga0307406_10008921
224 Ga0307407_10010542
225 Ga0307412_10001171
226 Ga0307412_10004064
227 Ga0307409_100010004
228 Ga0307416_100001333
229 Ga0307414_10004658
230 Ga0307414_10007402
231 Ga0307414_10020406
232 Ga0307411_10032254
233 Ga0307411_10041002
234 Ga0307415_100014514
235 Ga0307415_100017117
236 Ga0373956_0003911
237 Ga0373957_0003061
238 Ga0373933_0006301
239 Ga0436365_1394990
240 Ga0436365_1524166
241 Ga0436365_1723899
242 Ga0466963_0021151
243 Ga0451576_0026367
244 Ga0495672_0004097
245 Ga0496108_0031264
246 Ga0501033_0025231
247 Ga0501034_0089861
248 Ga0501042_0011168
249 Ga0501047_0007442
250 Ga0501067_0021549
251 Ga0501070_0019652
252 Ga0501071_0004312
253 Ga0501075_0006232
254 Ga0501079_0060596
255 Ga0501035_0000365
256 Ga0501044_0000511
257 nmdc:mga05p37_138819_c1
258 nmdc:mga05p37_6625_c1
259 nmdc:mga09592_12709_c1
260 nmdc:mga09592_6084_c1
261 nmdc:mga0qj67_46178_c1
262 nmdc:mga0qj67_8743_c1
263 nmdc:mga06r32_12598_c1
264 nmdc:mga06r32_21440_c1
265 nmdc:mga06r32_45845_c1
266 nmdc:mga06r32_85213_c1
267 nmdc:mga08y16_2298_c1
268 nmdc:mga08y16_2901_c1
269 nmdc:mga0n895_5761_c1
270 nmdc:mga0a205_22969_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

822

933

0.94

PF02687

FtsX

FtsX-like permease family

359

482

0.91

PF12704

MacB_PCD

MacB-like periplasmic core domain

102

317

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.687 129 350
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.6761 129 350
3is6-assembly1.cif.gz_A the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.64 127 348
8i6q-assembly1.cif.gz_A cryo-em structure of pseudomonas aeruginosa ftse(wt)x complex in peptidisc 0.634 345 483
3ftj-assembly1.cif.gz_A crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans 0.6216 533 776
ID Description Score Start End Superfamily
1fa0A01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Poly(A) polymerase predicted RNA binding domain 0.5519 536 597 3.30.70.590
af_A0A0R0GV15_321_483_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4781 343 486 1.20.1250.20
af_A0A0R0GV15_321_483_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4073 343 486 1.20.1250.20
af_Q9SIE0_90_314_2.60.120.590 Mainly Beta;Sandwich;Jelly Rolls;Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.3423 573 623 2.60.120.590
af_E9AHZ8_29_380_3.40.50.12760 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.3095 731 819 3.40.50.12760
ID Description Score Start End GO Terms
AF-A0A2V8RP82-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.9272 126 323
AF-A0A2V9KRE3-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.91 170 277
AF-A0A523I2J4-F1-model_v4 FtsX-like permease family protein 0.8659 78 488 GO:0005886
GO:0022857
AF-A0A1Q7Z9V7-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.8656 95 275 GO:0016020
AF-A0A2V8RP82-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.8647 126 323

Map