F161223

General Info

Members Datasets Scaffolds Average Seq Length
134 85 134 456

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0030105|Ga0501033_0030105_208_1638
Length 476
Sequence MLQRDRQIRTQIQQLADACLFAAGFYLAFSLRCDHHFSDWVSATLGRWFSFFHLERIQPEAFTGLLWLYFALVPAAPLVLESQGFYSRPVVSKRHTIFWPLAKSCLIVTVGLVLLLFLFRQIAPRGVMILFGVTSFGLVWIKEEILTVVMSSGMARSQYKRRIIVAGTPSETARLRRELALRVGDTIEVEAEFNLTNSPVQQLIEMLHEHSVSGVLVSARHATLEPVENVIKLCEIEGVETWLLADFFATQIAHASFDELFGRPLIVFRSAPETSWQVLLKMLLDFVGASLLIVLTSPLMLLVGLLIKWSSPGPVLFRQKRSGLNGAPFEIFKFRTMKTNAEQMKDELAAMNEMSGPVFKVTNDPRVTPVGRILRKWSLDELPQLFNVVRGEMSLVGPRPLPVDEVRRFSDLAHRRRLSVKPGITCLWQIKGRNQISDFKEWVRLDLEYIDNWSLLLDLKILLRTLPAVIRATGAK

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
7 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
12 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
13 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
19 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
20 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
23 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
31 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
32 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
33 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
34 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
35 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
38 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
39 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
40 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
43 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
44 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
45 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
46 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
47 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
48 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
49 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
50 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
51 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
52 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
53 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
54 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
55 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
56 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
57 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
62 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
63 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
64 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
65 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
66 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
67 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
68 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
69 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
70 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
71 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
72 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
73 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
76 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
85 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.51
Stem 0
Stem Tuber 0
Unclassified 1.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10100127 3300003320 Bacteria 10263
2 rootH1_10131382 3300003323 Bacteria 2021
3 Ga0070689_100001455 3300005340 Bacteria 15116
4 Ga0070689_100050670 3300005340 Bacteria 3208
5 Ga0070688_100104667 3300005365 Bacteria 1872
6 Ga0070694_100005753 3300005444 Bacteria 7524
7 Ga0070704_100013571 3300005549 Bacteria 5060
8 Ga0068855_100007621 3300005563 Bacteria 13091
9 Ga0068855_100020485 3300005563 Bacteria 7930
10 Ga0068856_100000446 3300005614 Bacteria 45656
11 Ga0070702_100107337 3300005615 Bacteria 1724
12 Ga0068859_100022565 3300005617 Bacteria 6312
13 Ga0068863_100023241 3300005841 Bacteria 5925
14 Ga0097621_100011206 3300006237 Bacteria 6602
15 Ga0068871_100007112 3300006358 Bacteria 7979
16 Ga0075431_100021812 3300006847 Bacteria 6548
17 Ga0075431_100054378 3300006847 Bacteria 4128
18 Ga0097620_100022565 3300006931 Bacteria 6312
19 Ga0111539_10042405 3300009094 Bacteria 5464
20 Ga0105245_10031252 3300009098 Bacteria 4711
21 Ga0105242_10161154 3300009176 Bacteria 1964
22 Ga0105238_10007807 3300009551 Bacteria 10702
23 Ga0105238_10023289 3300009551 Bacteria 6312
24 Ga0157375_10048672 3300013308 Bacteria 4148
25 Ga0163163_10000119 3300014325 Bacteria 84222
26 Ga0157376_10033781 3300014969 Bacteria 4122
27 Ga0157376_10105498 3300014969 Bacteria 2471
28 Ga0207694_10021832 3300025924 Bacteria 4853
29 Ga0207687_10186422 3300025927 Bacteria 1611
30 Ga0207670_10051337 3300025936 Bacteria 2768
31 Ga0207667_10032712 3300025949 Bacteria 5599
32 Ga0207702_10006875 3300026078 Bacteria 9749
33 Ga0207641_10005449 3300026088 Bacteria 10857
34 Ga0207674_10025227 3300026116 Bacteria 6343
35 Ga0207674_10111790 3300026116 Bacteria 2706
36 Ga0265337_1015946 3300028556 Bacteria 2444
37 Ga0265337_1026378 3300028556 Bacteria 1761
38 Ga0265319_1000001 3300028563 Bacteria 549513
39 Ga0265319_1019448 3300028563 Bacteria 2534
40 Ga0265323_10034013 3300028653 Bacteria 1885
41 Ga0265336_10006830 3300028666 Bacteria 4088
42 Ga0265338_10000050 3300028800 Bacteria 213659
43 Ga0265338_10000458 3300028800 Bacteria 72770
44 Ga0265338_10000629 3300028800 Bacteria 61303
45 Ga0265338_10001870 3300028800 Bacteria 33044
46 Ga0265338_10005590 3300028800 Bacteria 16351
47 Ga0265338_10006189 3300028800 Bacteria 15344
48 Ga0265338_10008831 3300028800 Bacteria 12158
49 Ga0265338_10016235 3300028800 Bacteria 8115
50 Ga0265338_10024606 3300028800 Bacteria 6145
51 Ga0265338_10030728 3300028800 Bacteria 5282
52 Ga0265338_10044020 3300028800 Bacteria 4129
53 Ga0265338_10087616 3300028800 Bacteria 2586
54 Ga0265324_10000382 3300029957 Bacteria 32039
55 Ga0265324_10004235 3300029957 Bacteria 6558
56 Ga0265320_10000665 3300031240 Bacteria 26247
57 Ga0265320_10003577 3300031240 Bacteria 10393
58 Ga0265325_10056512 3300031241 Bacteria 2004
59 Ga0265340_10000442 3300031247 Bacteria 22361
60 Ga0265331_10037231 3300031250 Bacteria 2384
61 Ga0265327_10003279 3300031251 Bacteria 15680
62 Ga0265327_10029329 3300031251 Bacteria 3131
63 Ga0265316_10002196 3300031344 Bacteria 20502
64 Ga0265316_10006960 3300031344 Bacteria 10724
65 Ga0265316_10013328 3300031344 Bacteria 7309
66 Ga0265316_10048722 3300031344 Bacteria 3342
67 Ga0265313_10001166 3300031595 Bacteria 25120
68 Ga0265314_10035363 3300031711 Bacteria 3642
69 Ga0373928_0000064 3300035084 Bacteria 18349
70 Ga0373944_0000013 3300035089 Bacteria 33114
71 Ga0373949_0000581 3300035090 Bacteria 12023
72 Ga0373932_0000001 3300035112 Bacteria 1459067
73 Ga0373945_0016205 3300035116 Bacteria 2511
74 Ga0373954_0000193 3300035118 Bacteria 22040
75 Ga0373956_0021227 3300035119 Bacteria 2769
76 Ga0373962_0000043 3300035242 Bacteria 29210
77 Ga0373931_0000002 3300035691 Bacteria 599830
78 Ga0373935_0011138 3300035692 Bacteria 5398
79 Ga0373927_0012136 3300035695 Bacteria 5732
80 Ga0373927_0013343 3300035695 Bacteria 5463
81 Ga0373927_0042079 3300035695 Bacteria 2961
82 Ga0373933_0008409 3300035724 Bacteria 5635
83 Ga0373947_0012715 3300035725 Bacteria 4825
84 Ga0373937_0000906 3300036401 Bacteria 25219
85 Ga0373937_0008235 3300036401 Bacteria 9052
86 Ga0373925_0000352 3300037068 Bacteria 47960
87 Ga0373925_0019107 3300037068 Bacteria 4983
88 Ga0451577_0001909 3300042876 Bacteria 26417
89 Ga0451577_0015910 3300042876 Bacteria 6978
90 Ga0453684_0002669 3300044712 Bacteria 42512
91 Ga0453684_0008425 3300044712 Bacteria 18472
92 Ga0451576_0067864 3300045051 Bacteria 3712
93 Ga0451576_0080755 3300045051 Bacteria 3383
94 Ga0495592_0000174 3300046454 Bacteria 56777
95 Ga0495592_0043279 3300046454 Bacteria 3369
96 Ga0495629_0123617 3300046459 Bacteria 1803
97 Ga0495618_0009257 3300046514 Bacteria 5944
98 Ga0495618_0021676 3300046514 Bacteria 3961
99 Ga0495628_0000383 3300046516 Bacteria 40500
100 Ga0495630_0000226 3300046517 Bacteria 44816
101 Ga0495630_0031702 3300046517 Bacteria 3936
102 Ga0495630_0039978 3300046517 Bacteria 3505
103 Ga0495640_0015375 3300046533 Bacteria 5762
104 Ga0495640_0018591 3300046533 Bacteria 5148
105 Ga0495640_0019896 3300046533 Bacteria 4951
106 Ga0495586_0000114 3300046535 Bacteria 48074
107 Ga0495586_0003081 3300046535 Bacteria 8984
108 Ga0495645_0011616 3300046543 Bacteria 6203
109 Ga0495645_0059100 3300046543 Bacteria 2781
110 Ga0495634_0002606 3300046642 Bacteria 14836
111 Ga0495635_0029906 3300046663 Bacteria 3787
112 Ga0495599_0002391 3300046678 Bacteria 10913
113 Ga0495613_0000999 3300046689 Bacteria 21503
114 Ga0495613_0112592 3300046689 Bacteria 1960
115 Ga0495674_0004280 3300047319 Bacteria 13739
116 Ga0495674_0019373 3300047319 Bacteria 6314
117 Ga0495674_0123578 3300047319 Bacteria 2185
118 Ga0495680_0002498 3300047322 Bacteria 18806
119 Ga0501031_0000841 3300049568 Bacteria 18445
120 Ga0501031_0087098 3300049568 Bacteria 2036
121 Ga0501032_0026906 3300049569 Bacteria 3954
122 Ga0501032_0201888 3300049569 Bacteria 1297
123 Ga0501033_0001939 3300049570 Bacteria 18011
124 Ga0501033_0030105 3300049570 Bacteria 4079
125 Ga0501043_0043543 3300049579 Bacteria 3528
126 Ga0501047_0145354 3300049581 Bacteria 2249
127 Ga0501080_0059313 3300049742 Bacteria 3561
128 Ga0501035_0003431 3300049822 Bacteria 15161
129 Ga0501035_0039050 3300049822 Bacteria 4297
130 Ga0501035_0089713 3300049822 Bacteria 2707
131 Ga0501044_0000232 3300049823 Bacteria 70100
132 Ga0501044_0059584 3300049823 Bacteria 3911
133 nmdc:mga06r32_150329_c1 3300050510 Bacteria 2307
134 nmdc:mga08y16_132400_c1 3300050511 Bacteria 2592

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035692 Ga0373935_0011138 Ga0373935_0011138_14_1168 366
2 3300049569 Ga0501032_0201888 Ga0501032_0201888_26_1189 387
3 3300026116 Ga0207674_10025227 Ga0207674_100252276 411
4 3300014969 Ga0157376_10105498 Ga0157376_101054982 421
5 3300049568 Ga0501031_0087098 Ga0501031_0087098_750_2021 423
6 3300049581 Ga0501047_0145354 Ga0501047_0145354_943_2214 423
7 3300046543 Ga0495645_0059100 Ga0495645_0059100_53_1333 426
8 3300042876 Ga0451577_0001909 Ga0451577_0001909_14869_16236 434
9 3300044712 Ga0453684_0008425 Ga0453684_0008425_14593_15960 434
10 3300046459 Ga0495629_0123617 Ga0495629_0123617_13_1326 435
11 3300036401 Ga0373937_0008235 Ga0373937_0008235_6749_8113 436
12 3300045051 Ga0451576_0080755 Ga0451576_0080755_1560_2930 439
13 3300028666 Ga0265336_10006830 Ga0265336_100068302 443
14 3300031344 Ga0265316_10013328 Ga0265316_100133284 443
15 3300028800 Ga0265338_10006189 Ga0265338_100061897 444
16 3300014325 Ga0163163_10000119 Ga0163163_1000011928 446
17 3300028563 Ga0265319_1019448 Ga0265319_10194482 446
18 3300028800 Ga0265338_10087616 Ga0265338_100876162 446
19 3300028800 Ga0265338_10001870 Ga0265338_1000187017 447
20 3300046454 Ga0495592_0043279 Ga0495592_0043279_1918_3300 447
21 3300028800 Ga0265338_10008831 Ga0265338_100088319 448
22 3300031344 Ga0265316_10006960 Ga0265316_100069602 448
23 3300031711 Ga0265314_10035363 Ga0265314_100353633 448
24 3300035084 Ga0373928_0000064 Ga0373928_0000064_16055_17458 449
25 3300035089 Ga0373944_0000013 Ga0373944_0000013_12910_14313 449
26 3300035090 Ga0373949_0000581 Ga0373949_0000581_5125_6528 449
27 3300035112 Ga0373932_0000001 Ga0373932_0000001_1196271_1197674 449
28 3300035116 Ga0373945_0016205 Ga0373945_0016205_166_1569 449
29 3300035242 Ga0373962_0000043 Ga0373962_0000043_11230_12633 449
30 3300035691 Ga0373931_0000002 Ga0373931_0000002_297724_299127 449
31 3300035695 Ga0373927_0042079 Ga0373927_0042079_1218_2621 449
32 3300037068 Ga0373925_0000352 Ga0373925_0000352_10898_12301 449
33 3300028556 Ga0265337_1015946 Ga0265337_10159462 450
34 3300028800 Ga0265338_10030728 Ga0265338_100307283 451
35 3300005563 Ga0068855_100007621 Ga0068855_10000762115 452
36 3300005563 Ga0068855_100020485 Ga0068855_1000204857 452
37 3300005614 Ga0068856_100000446 Ga0068856_10000044629 452
38 3300009551 Ga0105238_10007807 Ga0105238_100078073 452
39 3300025924 Ga0207694_10021832 Ga0207694_100218323 452
40 3300025949 Ga0207667_10032712 Ga0207667_100327123 452
41 3300026078 Ga0207702_10006875 Ga0207702_100068752 452
42 3300028800 Ga0265338_10000050 Ga0265338_1000005091 452
43 3300028800 Ga0265338_10016235 Ga0265338_100162354 452
44 3300031240 Ga0265320_10000665 Ga0265320_100006656 452
45 3300006847 Ga0075431_100021812 Ga0075431_1000218124 453
46 3300028653 Ga0265323_10034013 Ga0265323_100340132 453
47 3300031344 Ga0265316_10048722 Ga0265316_100487223 453
48 3300046689 Ga0495613_0112592 Ga0495613_0112592_98_1483 453
49 3300050510 nmdc:mga06r32_150329_c1 nmdc:mga06r32_150329_c1_795_2183 453
50 3300009098 Ga0105245_10031252 Ga0105245_100312524 454
51 3300009176 Ga0105242_10161154 Ga0105242_101611542 454
52 3300014969 Ga0157376_10033781 Ga0157376_100337813 454
53 3300028800 Ga0265338_10000629 Ga0265338_1000062911 454
54 3300028800 Ga0265338_10005590 Ga0265338_1000559011 454
55 3300044712 Ga0453684_0002669 Ga0453684_0002669_13475_14839 454
56 3300047319 Ga0495674_0004280 Ga0495674_0004280_11086_12549 454
57 3300049742 Ga0501080_0059313 Ga0501080_0059313_1399_2802 454
58 3300049822 Ga0501035_0089713 Ga0501035_0089713_96_1499 454
59 3300035695 Ga0373927_0013343 Ga0373927_0013343_2461_3897 458
60 3300037068 Ga0373925_0019107 Ga0373925_0019107_135_1571 458
61 3300042876 Ga0451577_0015910 Ga0451577_0015910_3847_5226 459
62 3300005340 Ga0070689_100050670 Ga0070689_1000506702 463
63 3300005615 Ga0070702_100107337 Ga0070702_1001073372 463
64 3300005617 Ga0068859_100022565 Ga0068859_1000225653 463
65 3300005841 Ga0068863_100023241 Ga0068863_1000232413 463
66 3300006237 Ga0097621_100011206 Ga0097621_1000112063 463
67 3300006358 Ga0068871_100007112 Ga0068871_1000071125 463
68 3300006847 Ga0075431_100054378 Ga0075431_1000543783 463
69 3300006931 Ga0097620_100022565 Ga0097620_1000225654 463
70 3300025927 Ga0207687_10186422 Ga0207687_101864221 463
71 3300025936 Ga0207670_10051337 Ga0207670_100513372 463
72 3300026088 Ga0207641_10005449 Ga0207641_100054493 463
73 3300028800 Ga0265338_10000458 Ga0265338_1000045857 463
74 3300031344 Ga0265316_10002196 Ga0265316_1000219612 463
75 3300035118 Ga0373954_0000193 Ga0373954_0000193_10158_11549 463
76 3300035119 Ga0373956_0021227 Ga0373956_0021227_321_1712 463
77 3300035695 Ga0373927_0012136 Ga0373927_0012136_2625_4016 463
78 3300035724 Ga0373933_0008409 Ga0373933_0008409_3102_4493 463
79 3300035725 Ga0373947_0012715 Ga0373947_0012715_2481_3872 463
80 3300036401 Ga0373937_0000906 Ga0373937_0000906_12704_14095 463
81 3300045051 Ga0451576_0067864 Ga0451576_0067864_1254_2645 463
82 3300046454 Ga0495592_0000174 Ga0495592_0000174_21989_23380 463
83 3300046514 Ga0495618_0009257 Ga0495618_0009257_2736_4127 463
84 3300046514 Ga0495618_0021676 Ga0495618_0021676_1876_3267 463
85 3300046516 Ga0495628_0000383 Ga0495628_0000383_22541_23932 463
86 3300046517 Ga0495630_0000226 Ga0495630_0000226_2243_3634 463
87 3300046517 Ga0495630_0031702 Ga0495630_0031702_110_1501 463
88 3300046517 Ga0495630_0039978 Ga0495630_0039978_245_1636 463
89 3300046533 Ga0495640_0015375 Ga0495640_0015375_2061_3452 463
90 3300046533 Ga0495640_0018591 Ga0495640_0018591_1947_3338 463
91 3300046533 Ga0495640_0019896 Ga0495640_0019896_479_1870 463
92 3300046535 Ga0495586_0000114 Ga0495586_0000114_41153_42544 463
93 3300046535 Ga0495586_0003081 Ga0495586_0003081_6981_8372 463
94 3300046543 Ga0495645_0011616 Ga0495645_0011616_1729_3120 463
95 3300046642 Ga0495634_0002606 Ga0495634_0002606_9257_10648 463
96 3300046663 Ga0495635_0029906 Ga0495635_0029906_2159_3550 463
97 3300046678 Ga0495599_0002391 Ga0495599_0002391_3293_4684 463
98 3300046689 Ga0495613_0000999 Ga0495613_0000999_7138_8529 463
99 3300047319 Ga0495674_0019373 Ga0495674_0019373_1822_3213 463
100 3300047319 Ga0495674_0123578 Ga0495674_0123578_235_1626 463
101 3300047322 Ga0495680_0002498 Ga0495680_0002498_9283_10674 463
102 3300050511 nmdc:mga08y16_132400_c1 nmdc:mga08y16_132400_c1_702_2093 463
103 3300005340 Ga0070689_100001455 Ga0070689_1000014556 464
104 3300005365 Ga0070688_100104667 Ga0070688_1001046671 464
105 3300005444 Ga0070694_100005753 Ga0070694_1000057534 464
106 3300005549 Ga0070704_100013571 Ga0070704_1000135713 464
107 3300009094 Ga0111539_10042405 Ga0111539_100424052 464
108 3300013308 Ga0157375_10048672 Ga0157375_100486722 464
109 3300026116 Ga0207674_10111790 Ga0207674_101117902 464
110 3300031251 Ga0265327_10029329 Ga0265327_100293293 464
111 3300028556 Ga0265337_1026378 Ga0265337_10263781 465
112 3300028563 Ga0265319_1000001 Ga0265319_1000001381 465
113 3300028800 Ga0265338_10024606 Ga0265338_100246062 465
114 3300028800 Ga0265338_10044020 Ga0265338_100440204 465
115 3300029957 Ga0265324_10000382 Ga0265324_100003828 465
116 3300029957 Ga0265324_10004235 Ga0265324_100042356 465
117 3300031240 Ga0265320_10003577 Ga0265320_100035778 465
118 3300031241 Ga0265325_10056512 Ga0265325_100565122 465
119 3300031247 Ga0265340_10000442 Ga0265340_1000044210 465
120 3300031595 Ga0265313_10001166 Ga0265313_100011664 465
121 3300049568 Ga0501031_0000841 Ga0501031_0000841_1521_2942 465
122 3300049569 Ga0501032_0026906 Ga0501032_0026906_1043_2464 465
123 3300049570 Ga0501033_0001939 Ga0501033_0001939_10116_11537 465
124 3300049822 Ga0501035_0003431 Ga0501035_0003431_9014_10435 465
125 3300049823 Ga0501044_0000232 Ga0501044_0000232_12897_14318 465
126 3300003320 rootH2_10100127 rootH2_101001277 473
127 3300003323 rootH1_10131382 rootH1_101313822 473
128 3300009551 Ga0105238_10023289 Ga0105238_100232893 473
129 3300031250 Ga0265331_10037231 Ga0265331_100372312 473
130 3300031251 Ga0265327_10003279 Ga0265327_1000327913 473
131 3300049570 Ga0501033_0030105 Ga0501033_0030105_208_1638 473
132 3300049579 Ga0501043_0043543 Ga0501043_0043543_181_1611 473
133 3300049822 Ga0501035_0039050 Ga0501035_0039050_993_2423 473
134 3300049823 Ga0501044_0059584 Ga0501044_0059584_2137_3567 473

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02397

Bac_transf

Bacterial sugar transferase

281

471

0.94

PF13727

CoA_binding_3

CoA-binding domain

81

245

0.7

Feature Viewer

pLDDT pTM Quality
70.36 0.46 Low
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Predicted Structure (AlphaFold2)

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