F159811

General Info

Members Datasets Scaffolds Average Seq Length
134 104 134 347

Family's Representative Sequence

Representative Sequence 3300013296|Ga0157374_10263333|Ga0157374_102633332
Length 393
Sequence VSTLGVFPFNGLDSIGSFPRIFPIENQGYIGLRIVENGWWVMDDDLNSTEAGALADETAWKQVVLQYQKPSRWRALWQIADTIVPYGVIWYFMYLSLSVSWWLVLPLAILAGMFLVRVFIIFHDCGHGSYFKSRKANDAVGFVTGLLTFTPFYQWRWDHAIHHATSSHLDKRGTGDLWTLTVQEYLESSRWRRFAYRLARNPIVLFVIAPLVVMVIKQRFASRNADQRERLSVYWMNLAILGMAAGLSLLFGILPYLLIQVTVLAVAGSIGFWLFYVQHQFEGAYWERAEQWDYTTAALKGSSFYKLPKILQWFSGNIGYHHIHHLSARIPNYNLERCHKAHLMFQQVKPLTLAGSFRTLALRLWDEQHQKLVGFRHLKKIRNQHGHSSQSNH

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
65 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
66 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
69 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
72 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
73 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
74 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
86 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
87 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
88 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
89 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
92 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
93 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
98 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
104 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.51
Metatranscriptomes 1.49
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.49
Nodule 0
Rhizoplane 0.75
Rhizosphere 97.01
Stem 0
Stem Tuber 0
Unclassified 0.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10016048 3300003320 Bacteria 16443
2 Ga0070690_100023654 3300005330 Bacteria 3770
3 Ga0070670_100101399 3300005331 Bacteria 2478
4 Ga0068869_100040287 3300005334 Bacteria 3340
5 Ga0070666_10005669 3300005335 Bacteria 7666
6 Ga0070687_100128736 3300005343 Bacteria 1459
7 Ga0070675_100082820 3300005354 Bacteria 2677
8 Ga0070659_100006624 3300005366 Bacteria 8369
9 Ga0070667_100152973 3300005367 Bacteria 2028
10 Ga0070714_100073106 3300005435 Unclassified 2970
11 Ga0070681_10022866 3300005458 Bacteria 6282
12 Ga0070679_100020730 3300005530 Bacteria 6412
13 Ga0070684_100441990 3300005535 Bacteria 1201
14 Ga0068853_100000024 3300005539 Bacteria 139787
15 Ga0068853_100000076 3300005539 Bacteria 67519
16 Ga0068853_100031453 3300005539 Bacteria 4489
17 Ga0070693_100085839 3300005547 Bacteria 1887
18 Ga0068855_100068546 3300005563 Bacteria 4130
19 Ga0070664_100138967 3300005564 Bacteria 2138
20 Ga0068857_100027494 3300005577 Bacteria 5017
21 Ga0068856_100112627 3300005614 Bacteria 2719
22 Ga0068859_100209233 3300005617 Bacteria 2037
23 Ga0068864_100270668 3300005618 Bacteria 1583
24 Ga0068858_100090511 3300005842 Unclassified 2847
25 Ga0068860_100108180 3300005843 Bacteria 2657
26 Ga0070715_10046266 3300006163 Bacteria 1849
27 Ga0075428_100002095 3300006844 Bacteria 21518
28 Ga0075430_100045691 3300006846 Bacteria 3699
29 Ga0075431_100055196 3300006847 Bacteria 4097
30 Ga0097620_100209231 3300006931 Bacteria 2037
31 Ga0075435_100144655 3300007076 Bacteria 1996
32 Ga0105240_10015861 3300009093 Bacteria 10222
33 Ga0105240_10027720 3300009093 Bacteria 7413
34 Ga0111539_10022189 3300009094 Bacteria 7804
35 Ga0105245_10277593 3300009098 Bacteria 1637
36 Ga0105238_10061086 3300009551 Bacteria 3772
37 Ga0105238_10075456 3300009551 Bacteria 3364
38 Ga0105238_10078120 3300009551 Bacteria 3301
39 Ga0105246_10012645 3300011119 Bacteria 5272
40 Ga0157371_10049648 3300013102 Bacteria 2980
41 Ga0157374_10000124 3300013296 Bacteria 70277
42 Ga0157374_10263333 3300013296 Bacteria 1699
43 Ga0157378_10259619 3300013297 Unclassified 1666
44 Ga0157372_10014922 3300013307 Bacteria 8317
45 Ga0157372_10134944 3300013307 Bacteria 2842
46 Ga0157372_10147991 3300013307 Unclassified 2709
47 Ga0163163_10000003 3300014325 Bacteria 455102
48 Ga0163163_10209811 3300014325 Bacteria 1997
49 Ga0157376_10001429 3300014969 Bacteria 15705
50 Ga0197907_10299255 3300020069 Unclassified 1363
51 Ga0206356_10286456 3300020070 Unclassified 1189
52 Ga0207647_10005389 3300025904 Bacteria 9395
53 Ga0207705_10084248 3300025909 Unclassified 2321
54 Ga0207707_10032590 3300025912 Bacteria 4561
55 Ga0207707_10105502 3300025912 Bacteria 2463
56 Ga0207695_10115692 3300025913 Bacteria 2656
57 Ga0207657_10002843 3300025919 Bacteria 18600
58 Ga0207652_10107801 3300025921 Bacteria 2467
59 Ga0207694_10003096 3300025924 Bacteria 13306
60 Ga0207694_10017112 3300025924 Bacteria 5477
61 Ga0207694_10074947 3300025924 Bacteria 2648
62 Ga0207650_10102737 3300025925 Bacteria 2203
63 Ga0207650_10274752 3300025925 Bacteria 1370
64 Ga0207659_10143238 3300025926 Bacteria 1858
65 Ga0207700_10307638 3300025928 Bacteria 1370
66 Ga0207644_10037585 3300025931 Bacteria 3407
67 Ga0207690_10021819 3300025932 Bacteria 3977
68 Ga0207670_10016419 3300025936 Unclassified 4448
69 Ga0207667_10132935 3300025949 Bacteria 2563
70 Ga0207639_10000044 3300026041 Bacteria 139835
71 Ga0207639_10000046 3300026041 Bacteria 134165
72 Ga0207708_10360946 3300026075 Bacteria 1194
73 Ga0207702_10050077 3300026078 Bacteria 3526
74 Ga0207674_10009064 3300026116 Bacteria 11427
75 Ga0207674_10013277 3300026116 Bacteria 9148
76 Ga0207683_10095724 3300026121 Bacteria 2647
77 Ga0207428_10140223 3300027907 Bacteria 1845
78 Ga0268264_10010374 3300028381 Bacteria 7702
79 Ga0268264_10311744 3300028381 Bacteria 1485
80 Ga0265337_1000171 3300028556 Bacteria 33931
81 Ga0265337_1003992 3300028556 Bacteria 6242
82 Ga0265326_10026180 3300028558 Unclassified 1664
83 Ga0265319_1000003 3300028563 Bacteria 340561
84 Ga0265334_10000137 3300028573 Bacteria 46220
85 Ga0265318_10001535 3300028577 Bacteria 13446
86 Ga0265336_10006568 3300028666 Bacteria 4180
87 Ga0265338_10001219 3300028800 Bacteria 42511
88 Ga0265338_10026495 3300028800 Bacteria 5844
89 Ga0265338_10070277 3300028800 Bacteria 3002
90 Ga0265338_10206578 3300028800 Bacteria 1477
91 Ga0265324_10000124 3300029957 Bacteria 61275
92 Ga0265324_10001600 3300029957 Bacteria 12605
93 Ga0265324_10012272 3300029957 Unclassified 3238
94 Ga0265332_10004273 3300031238 Bacteria 6748
95 Ga0265328_10009858 3300031239 Bacteria 3868
96 Ga0265329_10002496 3300031242 Bacteria 8310
97 Ga0265340_10020278 3300031247 Bacteria 3418
98 Ga0265313_10001728 3300031595 Bacteria 20106
99 Ga0265314_10000142 3300031711 Bacteria 108299
100 Ga0307412_10133368 3300031911 Bacteria 1808
101 Ga0373956_0112520 3300035119 Bacteria 1268
102 Ga0373927_0018789 3300035695 Bacteria 4535
103 Ga0373925_0108944 3300037068 Bacteria 2138
104 Ga0373925_0117133 3300037068 Bacteria 2064
105 Ga0451577_0002415 3300042876 Bacteria 22288
106 Ga0451577_0143013 3300042876 Unclassified 2150
107 Ga0453684_0028112 3300044712 Bacteria 8039
108 Ga0451576_0003492 3300045051 Bacteria 21510
109 Ga0451576_0033933 3300045051 Bacteria 5422
110 Ga0451576_0073831 3300045051 Bacteria 3550
111 Ga0451576_0344969 3300045051 Bacteria 1559
112 Ga0495580_0156346 3300046472 Bacteria 1579
113 Ga0495594_0109272 3300046499 Bacteria 1559
114 Ga0495618_0004098 3300046514 Bacteria 8997
115 Ga0495630_0000192 3300046517 Bacteria 47913
116 Ga0495666_0005616 3300046526 Bacteria 6316
117 Ga0495640_0018065 3300046533 Bacteria 5241
118 Ga0495586_0000115 3300046535 Bacteria 47977
119 Ga0495634_0003751 3300046642 Bacteria 12089
120 Ga0495634_0028983 3300046642 Bacteria 3837
121 Ga0495647_0007483 3300046681 Bacteria 3661
122 Ga0495647_0012828 3300046681 Bacteria 2891
123 Ga0495647_0081199 3300046681 Bacteria 1315
124 Ga0495658_0017574 3300046683 Bacteria 3698
125 Ga0495613_0000302 3300046689 Bacteria 44392
126 Ga0495674_0004110 3300047319 Bacteria 14051
127 Ga0495676_0007115 3300047321 Bacteria 10271
128 Ga0495680_0129811 3300047322 Unclassified 1853
129 Ga0496105_0257286 3300048908 Bacteria 1413
130 Ga0501080_0242929 3300049742 Bacteria 1643
131 nmdc:mga06r32_26887_c1 3300050510 Bacteria 5370
132 nmdc:mga08y16_63431_c1 3300050511 Bacteria 3859
133 Ga0500556_0006605 3300053104 Bacteria 3297
134 Ga0500559_0006087 3300053136 Bacteria 5466

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005539 Ga0068853_100000024 Ga0068853_100000024116 317
2 3300026041 Ga0207639_10000044 Ga0207639_10000044108 317
3 3300005331 Ga0070670_100101399 Ga0070670_1001013991 320
4 3300005843 Ga0068860_100108180 Ga0068860_1001081806 320
5 3300025925 Ga0207650_10274752 Ga0207650_102747522 320
6 3300025936 Ga0207670_10016419 Ga0207670_100164192 320
7 3300028381 Ga0268264_10010374 Ga0268264_100103745 320
8 3300042876 Ga0451577_0002415 Ga0451577_0002415_5865_6842 325
9 3300044712 Ga0453684_0028112 Ga0453684_0028112_1092_2069 325
10 3300053136 Ga0500559_0006087 Ga0500559_0006087_174_1151 325
11 3300029957 Ga0265324_10012272 Ga0265324_100122723 338
12 3300037068 Ga0373925_0108944 Ga0373925_0108944_293_1315 338
13 3300046499 Ga0495594_0109272 Ga0495594_0109272_58_1086 338
14 3300046681 Ga0495647_0012828 Ga0495647_0012828_298_1326 338
15 3300046683 Ga0495658_0017574 Ga0495658_0017574_1816_2844 338
16 3300005539 Ga0068853_100000076 Ga0068853_10000007655 339
17 3300006846 Ga0075430_100045691 Ga0075430_1000456914 339
18 3300006847 Ga0075431_100055196 Ga0075431_1000551963 339
19 3300007076 Ga0075435_100144655 Ga0075435_1001446551 339
20 3300026041 Ga0207639_10000046 Ga0207639_10000046103 339
21 3300050510 nmdc:mga06r32_26887_c1 nmdc:mga06r32_26887_c1_1155_2177 339
22 3300005563 Ga0068855_100068546 Ga0068855_1000685461 341
23 3300009093 Ga0105240_10015861 Ga0105240_100158616 341
24 3300013307 Ga0157372_10147991 Ga0157372_101479914 341
25 3300020069 Ga0197907_10299255 Ga0197907_102992552 341
26 3300020070 Ga0206356_10286456 Ga0206356_102864561 341
27 3300005330 Ga0070690_100023654 Ga0070690_1000236542 342
28 3300005334 Ga0068869_100040287 Ga0068869_1000402872 342
29 3300005335 Ga0070666_10005669 Ga0070666_100056692 342
30 3300005366 Ga0070659_100006624 Ga0070659_1000066242 342
31 3300005367 Ga0070667_100152973 Ga0070667_1001529731 342
32 3300005435 Ga0070714_100073106 Ga0070714_1000731061 342
33 3300005530 Ga0070679_100020730 Ga0070679_1000207305 342
34 3300005535 Ga0070684_100441990 Ga0070684_1004419901 342
35 3300005539 Ga0068853_100031453 Ga0068853_1000314532 342
36 3300005564 Ga0070664_100138967 Ga0070664_1001389672 342
37 3300005577 Ga0068857_100027494 Ga0068857_1000274942 342
38 3300005842 Ga0068858_100090511 Ga0068858_1000905112 342
39 3300009093 Ga0105240_10027720 Ga0105240_100277203 342
40 3300009551 Ga0105238_10078120 Ga0105238_100781202 342
41 3300011119 Ga0105246_10012645 Ga0105246_100126452 342
42 3300013102 Ga0157371_10049648 Ga0157371_100496481 342
43 3300013307 Ga0157372_10014922 Ga0157372_100149224 342
44 3300025904 Ga0207647_10005389 Ga0207647_100053895 342
45 3300025912 Ga0207707_10105502 Ga0207707_101055022 342
46 3300025919 Ga0207657_10002843 Ga0207657_100028436 342
47 3300025921 Ga0207652_10107801 Ga0207652_101078012 342
48 3300025931 Ga0207644_10037585 Ga0207644_100375852 342
49 3300025932 Ga0207690_10021819 Ga0207690_100218192 342
50 3300026116 Ga0207674_10013277 Ga0207674_100132771 342
51 3300026121 Ga0207683_10095724 Ga0207683_100957242 342
52 3300028381 Ga0268264_10311744 Ga0268264_103117441 342
53 3300028556 Ga0265337_1000171 Ga0265337_10001712 342
54 3300029957 Ga0265324_10000124 Ga0265324_1000012465 342
55 3300005343 Ga0070687_100128736 Ga0070687_1001287362 343
56 3300005547 Ga0070693_100085839 Ga0070693_1000858392 343
57 3300026078 Ga0207702_10050077 Ga0207702_100500775 343
58 3300042876 Ga0451577_0143013 Ga0451577_0143013_809_1852 343
59 3300049742 Ga0501080_0242929 Ga0501080_0242929_242_1273 343
60 3300005618 Ga0068864_100270668 Ga0068864_1002706682 344
61 3300014325 Ga0163163_10000003 Ga0163163_1000000313 344
62 3300025926 Ga0207659_10143238 Ga0207659_101432381 344
63 3300037068 Ga0373925_0117133 Ga0373925_0117133_791_1828 344
64 3300045051 Ga0451576_0003492 Ga0451576_0003492_11500_12552 344
65 3300046472 Ga0495580_0156346 Ga0495580_0156346_452_1489 344
66 3300048908 Ga0496105_0257286 Ga0496105_0257286_115_1167 344
67 3300006844 Ga0075428_100002095 Ga0075428_10000209516 345
68 3300009094 Ga0111539_10022189 Ga0111539_100221894 345
69 3300027907 Ga0207428_10140223 Ga0207428_101402232 345
70 3300031911 Ga0307412_10133368 Ga0307412_101333682 345
71 3300050511 nmdc:mga08y16_63431_c1 nmdc:mga08y16_63431_c1_855_1892 345
72 3300013307 Ga0157372_10134944 Ga0157372_101349444 346
73 3300025924 Ga0207694_10003096 Ga0207694_100030965 346
74 3300028556 Ga0265337_1003992 Ga0265337_10039928 346
75 3300028666 Ga0265336_10006568 Ga0265336_100065686 346
76 3300028800 Ga0265338_10001219 Ga0265338_1000121933 346
77 3300035695 Ga0373927_0018789 Ga0373927_0018789_2650_3696 346
78 3300045051 Ga0451576_0033933 Ga0451576_0033933_124_1167 346
79 3300046517 Ga0495630_0000192 Ga0495630_0000192_21220_22305 346
80 3300046526 Ga0495666_0005616 Ga0495666_0005616_1211_2296 346
81 3300046533 Ga0495640_0018065 Ga0495640_0018065_1504_2589 346
82 3300046535 Ga0495586_0000115 Ga0495586_0000115_21228_22313 346
83 3300046642 Ga0495634_0028983 Ga0495634_0028983_1519_2604 346
84 3300046681 Ga0495647_0007483 Ga0495647_0007483_1370_2455 346
85 3300047319 Ga0495674_0004110 Ga0495674_0004110_10587_11672 346
86 3300047321 Ga0495676_0007115 Ga0495676_0007115_2274_3359 346
87 3300013297 Ga0157378_10259619 Ga0157378_102596191 347
88 3300026116 Ga0207674_10009064 Ga0207674_1000906419 347
89 3300053104 Ga0500556_0006605 Ga0500556_0006605_1510_2565 347
90 3300006163 Ga0070715_10046266 Ga0070715_100462663 348
91 3300028573 Ga0265334_10000137 Ga0265334_1000013716 348
92 3300028577 Ga0265318_10001535 Ga0265318_100015355 348
93 3300005614 Ga0068856_100112627 Ga0068856_1001126274 349
94 3300005617 Ga0068859_100209233 Ga0068859_1002092331 349
95 3300006931 Ga0097620_100209231 Ga0097620_1002092311 349
96 3300009551 Ga0105238_10075456 Ga0105238_100754563 349
97 3300014325 Ga0163163_10209811 Ga0163163_102098111 349
98 3300025924 Ga0207694_10017112 Ga0207694_100171126 349
99 3300028558 Ga0265326_10026180 Ga0265326_100261801 349
100 3300031238 Ga0265332_10004273 Ga0265332_100042732 349
101 3300031239 Ga0265328_10009858 Ga0265328_100098582 349
102 3300031242 Ga0265329_10002496 Ga0265329_100024962 349
103 3300031247 Ga0265340_10020278 Ga0265340_100202782 349
104 3300031711 Ga0265314_10000142 Ga0265314_1000014286 349
105 3300045051 Ga0451576_0073831 Ga0451576_0073831_1466_2515 349
106 3300003320 rootH2_10016048 rootH2_100160485 350
107 3300005354 Ga0070675_100082820 Ga0070675_1000828201 350
108 3300005458 Ga0070681_10022866 Ga0070681_100228666 350
109 3300009098 Ga0105245_10277593 Ga0105245_102775931 350
110 3300009551 Ga0105238_10061086 Ga0105238_100610862 350
111 3300013296 Ga0157374_10000124 Ga0157374_1000012458 350
112 3300013296 Ga0157374_10263333 Ga0157374_102633332 350
113 3300014969 Ga0157376_10001429 Ga0157376_100014299 350
114 3300025909 Ga0207705_10084248 Ga0207705_100842484 350
115 3300025912 Ga0207707_10032590 Ga0207707_100325904 350
116 3300025913 Ga0207695_10115692 Ga0207695_101156923 350
117 3300025924 Ga0207694_10074947 Ga0207694_100749471 350
118 3300025925 Ga0207650_10102737 Ga0207650_101027373 350
119 3300025928 Ga0207700_10307638 Ga0207700_103076381 350
120 3300025949 Ga0207667_10132935 Ga0207667_101329353 350
121 3300026075 Ga0207708_10360946 Ga0207708_103609461 350
122 3300028563 Ga0265319_1000003 Ga0265319_1000003116 350
123 3300028800 Ga0265338_10026495 Ga0265338_100264954 350
124 3300028800 Ga0265338_10070277 Ga0265338_100702773 350
125 3300028800 Ga0265338_10206578 Ga0265338_102065782 350
126 3300029957 Ga0265324_10001600 Ga0265324_100016002 350
127 3300031595 Ga0265313_10001728 Ga0265313_1000172811 350
128 3300035119 Ga0373956_0112520 Ga0373956_0112520_95_1165 350
129 3300045051 Ga0451576_0344969 Ga0451576_0344969_373_1425 350
130 3300046514 Ga0495618_0004098 Ga0495618_0004098_4192_5262 350
131 3300046642 Ga0495634_0003751 Ga0495634_0003751_3685_4755 350
132 3300046681 Ga0495647_0081199 Ga0495647_0081199_188_1258 350
133 3300046689 Ga0495613_0000302 Ga0495613_0000302_2139_3209 350
134 3300047322 Ga0495680_0129811 Ga0495680_0129811_40_1110 350

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00487

FA_desaturase

Fatty acid desaturase

100

350

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
8sbb-assembly1.cif.gz_A cryo-em structure of ftalkb 0.621 30 294
8sbb-assembly1.cif.gz_A cryo-em structure of ftalkb 0.4579 30 294
7zxk-assembly1.cif.gz_A human il-27 in complex with neutralizing srf388 fab fragment 0.261 71 235
7zxk-assembly2.cif.gz_C human il-27 in complex with neutralizing srf388 fab fragment 0.2583 71 235
6fi4-assembly1.cif.gz_A-2 crystal structure of c-terminal modified tau peptide-hybrid 3.2e with 14-3-3sigma 0.2559 2 234
ID Description Score Start End Superfamily
af_A0A0R4J2X1_81_350_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.698 59 327 3.30.40.10
af_A0A0R4J2X1_81_350_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.6933 59 327 3.30.40.10
af_O45436_250_477_1.10.565.10 Mainly Alpha;Orthogonal Bundle;Retinoid X Receptor;Retinoid X Receptor 0.4144 147 238 1.10.565.10
af_Q9XTJ4_222_461_1.10.565.10 Mainly Alpha;Orthogonal Bundle;Retinoid X Receptor;Retinoid X Receptor 0.2834 67 238 1.10.565.10
af_O17927_126_336_1.10.565.10 Mainly Alpha;Orthogonal Bundle;Retinoid X Receptor;Retinoid X Receptor 0.2825 71 238 1.10.565.10
ID Description Score Start End GO Terms
AF-A0A7Y1UI07-F1-model_v4 Fatty acid desaturase 0.972 10 348 GO:0006629
GO:0016020
GO:0016717
AF-A0A3A5WC15-F1-model_v4 Fatty acid desaturase 0.9697 16 345 GO:0006629
GO:0016020
GO:0016717
AF-A0A6H0WH39-F1-model_v4 Fatty acid desaturase 0.9675 15 343 GO:0006629
GO:0016020
GO:0016717
AF-A0A254NW64-F1-model_v4 Fatty acid desaturase 0.9675 15 333 GO:0006629
GO:0016020
GO:0016717
AF-A0A377FXD7-F1-model_v4 Fatty acid desaturase 0.967 15 340 GO:0006629
GO:0016020
GO:0016717

Feature Viewer

pLDDT pTM Quality
80.84 0.81 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map