F159413

General Info

Members Datasets Scaffolds Average Seq Length
134 96 268 624

Family's Representative Sequence

Representative Sequence 3300006173|Ga0070716_100011948|Ga0070716_1000119483
Length 706
Sequence VSPVKGFGTFAGRQPTLIDVKARRGIRGGGRRGRSRAPRTRQAKVQLMRALGCQLVLSLAVGLAVTGIAEAQGLAYVPHPPTAGALYRDGQTGRYLLGGAWLYRADLGDVGVTEGWWRNLAATDGWSPATIPNAYNAGDFSTTSAQGYVGWYRKDFALPSGAFARYVPASEHRWIVRFEAVNYRATVWLNGRLIGSHVGENLPFELELNGVRSGVNRLIVRVDDRRSRSDFPPGPGVGWWDFGGILREVYLRTAQVADLSQVDVRPLLPCPVCTATVSEQVLVRNLTGVRQTVQLRGYYGSAPLDFGSATIAPHAIWTARAAVRIAHPRLWSTDHPVLYRATLSLSDEHGRRLGRYVTYSGIRSITVTRDGRLALNGRLLRLRGVEVHEQSIATGGALAPTQIAQLIGWVRALDATVIRTDPPSPELAEMADRDGILIWTEIPVNQYVGKQYLGQPAWVARAHALLEDNILANQNHPSVMLWSIGNELPTPATAAETSYIAGAASLAHRLDPTRPVGMSVSDWPGVPCQHAYAPLDVIGVNEYFGWFDAGGGATDDEAALSPFLDSFRACYPTKGLFVSEFGFDANRDGPVEVRGTYQFQSAAAAYHLGVFASKPWLSGAMYFMLQDDATSLSYSGGNPWPDPPFDQKGLVDLYGNLKPAFAVVASSDKATVQIAPHRVTRVALRHTRSRRHGRRFRPRPGRLRRA

Samples

Sample ID Description Type Environment
1 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
26 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
27 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
28 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
29 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
30 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
48 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
49 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
50 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
51 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
52 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
55 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
58 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
59 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
60 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
61 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
62 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
63 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
64 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
65 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
66 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
67 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
68 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
69 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
70 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
71 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
72 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
73 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
74 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
75 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
76 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
77 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
78 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
79 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
80 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
81 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
82 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
83 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
84 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
85 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
86 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
89 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
90 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
95 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
96 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.75
Nodule 0
Rhizoplane 12.69
Rhizosphere 67.16
Stem 0
Stem Tuber 0
Unclassified 4.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070716_100011948 3300006173 Bacteria 4387
2 Ga0068868_100033641 3300005338 Bacteria 3952
3 Ga0070660_100003697 3300005339 Bacteria 10559
4 Ga0070689_100014689 3300005340 Bacteria 5694
5 Ga0070669_100007960 3300005353 Bacteria 7571
6 Ga0070659_100000163 3300005366 Bacteria 51399
7 Ga0070709_10012172 3300005434 Bacteria 4811
8 Ga0070714_100006924 3300005435 Bacteria 8789
9 Ga0070710_10000001 3300005437 Bacteria 552187
10 Ga0070711_100016844 3300005439 Bacteria 4645
11 Ga0070705_100002329 3300005440 Bacteria 9581
12 Ga0070665_100006869 3300005548 Bacteria 11569
13 Ga0068856_100057572 3300005614 Bacteria 3837
14 Ga0068861_100052504 3300005719 Bacteria 3098
15 Ga0081455_10015251 3300005937 Bacteria 7473
16 Ga0081540_1004928 3300005983 Bacteria 10046
17 Ga0081539_10015742 3300005985 Bacteria 5472
18 Ga0070717_10043281 3300006028 Bacteria 3675
19 Ga0070712_100002777 3300006175 Bacteria 10810
20 Ga0070712_100006867 3300006175 Bacteria 7093
21 Ga0070712_100050524 3300006175 Bacteria 2893
22 Ga0075429_100011005 3300006880 Bacteria 7825
23 Ga0105240_10130109 3300009093 Bacteria 3020
24 Ga0105245_10053022 3300009098 Bacteria 3640
25 Ga0105249_10011334 3300009553 Bacteria 7828
26 Ga0105239_10145943 3300010375 Bacteria 2639
27 Ga0157379_10004505 3300014968 Bacteria 11948
28 Ga0157376_10027573 3300014969 Bacteria 4504
29 Ga0213874_10000926 3300021377 Bacteria 5989
30 Ga0213876_10002786 3300021384 Bacteria 10180
31 Ga0213876_10014101 3300021384 Unclassified 4238
32 Ga0213876_10016549 3300021384 Bacteria 3898
33 Ga0213875_10011461 3300021388 Bacteria 4409
34 Ga0207692_10000004 3300025898 Bacteria 413600
35 Ga0207692_10008085 3300025898 Bacteria 4341
36 Ga0207688_10023142 3300025901 Bacteria 3400
37 Ga0207699_10005236 3300025906 Bacteria 6207
38 Ga0207695_10034567 3300025913 Bacteria 5494
39 Ga0207693_10002783 3300025915 Bacteria 15140
40 Ga0207693_10011763 3300025915 Bacteria 7073
41 Ga0207657_10014932 3300025919 Bacteria 7547
42 Ga0207681_10011109 3300025923 Bacteria 5530
43 Ga0207687_10017045 3300025927 Bacteria 4776
44 Ga0207664_10003062 3300025929 Bacteria 11109
45 Ga0207690_10000166 3300025932 Bacteria 51430
46 Ga0207709_10016331 3300025935 Bacteria 4126
47 Ga0207665_10019202 3300025939 Bacteria 4491
48 Ga0207712_10036095 3300025961 Bacteria 3364
49 Ga0207702_10145591 3300026078 Bacteria 2149
50 Ga0207676_10043227 3300026095 Bacteria 3468
51 Ga0207675_100051794 3300026118 Bacteria 3831
52 Ga0268265_10074487 3300028380 Bacteria 2656
53 Ga0307409_100125161 3300031995 Bacteria 2185
54 Ga0373947_0034863 3300035725 Bacteria 2978
55 Ga0436364_0117126 3300037853 Bacteria 9342
56 Ga0436364_0240449 3300037853 Bacteria 25321
57 Ga0436364_0375359 3300037853 Bacteria 7690
58 Ga0436364_0528708 3300037853 Bacteria 35377
59 Ga0436364_0605912 3300037853 Bacteria 4797
60 Ga0436364_0726704 3300037853 Bacteria 4617
61 Ga0436364_0861453 3300037853 Bacteria 6564
62 Ga0436364_1372028 3300037853 Bacteria 6084
63 Ga0395901_0121314 3300038443 Bacteria 2747
64 Ga0436365_0013190 3300039437 Bacteria 7507
65 Ga0436365_0057817 3300039437 Bacteria 12470
66 Ga0436365_0309683 3300039437 Bacteria 5456
67 Ga0436365_0715357 3300039437 Bacteria 18858
68 Ga0436365_0720780 3300039437 Bacteria 5380
69 Ga0436365_0780473 3300039437 Bacteria 8080
70 Ga0436365_0829860 3300039437 Unclassified 2397
71 Ga0436365_0984709 3300039437 Bacteria 4927
72 Ga0436365_1724369 3300039437 Bacteria 6104
73 Ga0436363_0347976 3300039450 Bacteria 9292
74 Ga0436363_0556594 3300039450 Bacteria 2985
75 Ga0436363_0805533 3300039450 Bacteria 51825
76 Ga0466963_0006312 3300044694 Bacteria 7011
77 Ga0466963_0016459 3300044694 Bacteria 4598
78 Ga0466963_0031063 3300044694 Bacteria 3450
79 Ga0466963_0049765 3300044694 Unclassified 2772
80 Ga0466968_0017604 3300044735 Unclassified 2859
81 Ga0466960_0000199 3300044901 Bacteria 20727
82 Ga0466959_0049891 3300045049 Bacteria 3074
83 Ga0466958_0008590 3300045836 Bacteria 5670
84 Ga0466958_0069322 3300045836 Unclassified 2156
85 Ga0466967_0037207 3300045976 Bacteria 4162
86 Ga0466967_0052057 3300045976 Bacteria 3591
87 Ga0466967_0125668 3300045976 Bacteria 2375
88 Ga0495603_0075723 3300046455 Bacteria 1975
89 Ga0495641_0014954 3300046461 Bacteria 4176
90 Ga0495651_0015791 3300046462 Bacteria 5845
91 Ga0495653_0024212 3300046463 Bacteria 4896
92 Ga0495653_0040049 3300046463 Bacteria 3665
93 Ga0495650_0000012 3300046471 Bacteria 613144
94 Ga0495608_0003157 3300046511 Bacteria 11780
95 Ga0495618_0008102 3300046514 Bacteria 6363
96 Ga0495587_0026964 3300046536 Bacteria 3500
97 Ga0495667_0011088 3300046559 Bacteria 6094
98 Ga0495635_0028433 3300046663 Bacteria 3886
99 Ga0495599_0064029 3300046678 Bacteria 2297
100 Ga0495646_0004161 3300046680 Bacteria 9088
101 Ga0495600_0000896 3300046809 Bacteria 15942
102 Ga0495600_0031993 3300046809 Bacteria 3411
103 Ga0495604_0024133 3300047317 Bacteria 4854
104 Ga0495674_0053312 3300047319 Bacteria 3556
105 Ga0495674_0055576 3300047319 Bacteria 3471
106 Ga0495674_0072280 3300047319 Unclassified 2975
107 Ga0495680_0009157 3300047322 Bacteria 8933
108 Ga0495684_0011002 3300047471 Bacteria 6996
109 Ga0495602_0003601 3300048088 Bacteria 16048
110 Ga0495602_0014533 3300048088 Bacteria 7988
111 Ga0496100_0014971 3300048903 Bacteria 4521
112 Ga0496101_0003399 3300048904 Bacteria 9929
113 Ga0496102_0048761 3300048905 Bacteria 3851
114 Ga0496102_0144526 3300048905 Bacteria 2231
115 Ga0496104_0007288 3300048907 Bacteria 9760
116 Ga0496106_0034631 3300048909 Bacteria 3772
117 Ga0496107_0001173 3300048910 Bacteria 15902
118 Ga0496108_0006966 3300048911 Bacteria 9150
119 Ga0496108_0018259 3300048911 Bacteria 5743
120 Ga0496108_0162839 3300048911 Bacteria 1928
121 Ga0496109_0000682 3300048912 Bacteria 28239
122 Ga0496109_0076600 3300048912 Bacteria 3076
123 Ga0496110_0056558 3300048913 Bacteria 3452
124 Ga0496111_0014300 3300048914 Bacteria 5418
125 Ga0496112_0010451 3300048915 Bacteria 8419
126 Ga0496113_0002300 3300048916 Bacteria 11027
127 Ga0496115_0011664 3300048918 Bacteria 6597
128 Ga0496121_0051375 3300048924 Bacteria 3472
129 Ga0501034_0005807 3300049571 Bacteria 13421
130 Ga0501047_0105944 3300049581 Bacteria 2692
131 nmdc:mga09592_9367_c1 3300050508 Bacteria 7966
132 Ga0495601_0013009 3300053077 Bacteria 4999
133 Ga0495619_0020021 3300053085 Bacteria 4258
134 Ga0500616_0005203 3300053153 Bacteria 8908
135 Ga0070716_100011948
136 Ga0068868_100033641
137 Ga0070660_100003697
138 Ga0070689_100014689
139 Ga0070669_100007960
140 Ga0070659_100000163
141 Ga0070709_10012172
142 Ga0070714_100006924
143 Ga0070710_10000001
144 Ga0070711_100016844
145 Ga0070705_100002329
146 Ga0070665_100006869
147 Ga0068856_100057572
148 Ga0068861_100052504
149 Ga0081455_10015251
150 Ga0081540_1004928
151 Ga0081539_10015742
152 Ga0070717_10043281
153 Ga0070712_100002777
154 Ga0070712_100006867
155 Ga0070712_100050524
156 Ga0075429_100011005
157 Ga0105240_10130109
158 Ga0105245_10053022
159 Ga0105249_10011334
160 Ga0105239_10145943
161 Ga0157379_10004505
162 Ga0157376_10027573
163 Ga0213874_10000926
164 Ga0213876_10002786
165 Ga0213876_10014101
166 Ga0213876_10016549
167 Ga0213875_10011461
168 Ga0207692_10000004
169 Ga0207692_10008085
170 Ga0207688_10023142
171 Ga0207699_10005236
172 Ga0207695_10034567
173 Ga0207693_10002783
174 Ga0207693_10011763
175 Ga0207657_10014932
176 Ga0207681_10011109
177 Ga0207687_10017045
178 Ga0207664_10003062
179 Ga0207690_10000166
180 Ga0207709_10016331
181 Ga0207665_10019202
182 Ga0207712_10036095
183 Ga0207702_10145591
184 Ga0207676_10043227
185 Ga0207675_100051794
186 Ga0268265_10074487
187 Ga0307409_100125161
188 Ga0373947_0034863
189 Ga0436364_0117126
190 Ga0436364_0240449
191 Ga0436364_0375359
192 Ga0436364_0528708
193 Ga0436364_0605912
194 Ga0436364_0726704
195 Ga0436364_0861453
196 Ga0436364_1372028
197 Ga0395901_0121314
198 Ga0436365_0013190
199 Ga0436365_0057817
200 Ga0436365_0309683
201 Ga0436365_0715357
202 Ga0436365_0720780
203 Ga0436365_0780473
204 Ga0436365_0829860
205 Ga0436365_0984709
206 Ga0436365_1724369
207 Ga0436363_0347976
208 Ga0436363_0556594
209 Ga0436363_0805533
210 Ga0466963_0006312
211 Ga0466963_0016459
212 Ga0466963_0031063
213 Ga0466963_0049765
214 Ga0466968_0017604
215 Ga0466960_0000199
216 Ga0466959_0049891
217 Ga0466958_0008590
218 Ga0466958_0069322
219 Ga0466967_0037207
220 Ga0466967_0052057
221 Ga0466967_0125668
222 Ga0495603_0075723
223 Ga0495641_0014954
224 Ga0495651_0015791
225 Ga0495653_0024212
226 Ga0495653_0040049
227 Ga0495650_0000012
228 Ga0495608_0003157
229 Ga0495618_0008102
230 Ga0495587_0026964
231 Ga0495667_0011088
232 Ga0495635_0028433
233 Ga0495599_0064029
234 Ga0495646_0004161
235 Ga0495600_0000896
236 Ga0495600_0031993
237 Ga0495604_0024133
238 Ga0495674_0053312
239 Ga0495674_0055576
240 Ga0495674_0072280
241 Ga0495680_0009157
242 Ga0495684_0011002
243 Ga0495602_0003601
244 Ga0495602_0014533
245 Ga0496100_0014971
246 Ga0496101_0003399
247 Ga0496102_0048761
248 Ga0496102_0144526
249 Ga0496104_0007288
250 Ga0496106_0034631
251 Ga0496107_0001173
252 Ga0496108_0006966
253 Ga0496108_0018259
254 Ga0496108_0162839
255 Ga0496109_0000682
256 Ga0496109_0076600
257 Ga0496110_0056558
258 Ga0496111_0014300
259 Ga0496112_0010451
260 Ga0496113_0002300
261 Ga0496115_0011664
262 Ga0496121_0051375
263 Ga0501034_0005807
264 Ga0501047_0105944
265 nmdc:mga09592_9367_c1
266 Ga0495601_0013009
267 Ga0495619_0020021
268 Ga0500616_0005203

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02836

Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

365

590

0.89

PF02837

Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

95

255

0.74

PF00703

Glyco_hydro_2

Glycosyl hydrolases family 2

258

363

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ncx-assembly1.cif.gz_C crystal structure of gh2 beta-galacturonidase from eisenbergiella tayi bound to galacturonate 0.9013 30 612
6ncx-assembly1.cif.gz_A crystal structure of gh2 beta-galacturonidase from eisenbergiella tayi bound to galacturonate 0.9013 30 612
6ncw-assembly1.cif.gz_A crystal structure of a gh2 beta-galacturonidase from eisenbergiella tayi bound to glycerol 0.896 30 619
6ncx-assembly1.cif.gz_C crystal structure of gh2 beta-galacturonidase from eisenbergiella tayi bound to galacturonate 0.8907 30 612
6ncw-assembly1.cif.gz_D crystal structure of a gh2 beta-galacturonidase from eisenbergiella tayi bound to glycerol 0.8906 30 619
ID Description Score Start End Superfamily
4ypjB02 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9126 198 303 2.60.40.10
2vzoA02 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9094 198 303 2.60.40.10
6mvhB03 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9079 306 605 3.20.20.80
af_Q54TD3_213_531_1.10.560.10 Mainly Alpha;Orthogonal Bundle;GROEL; domain 1;GroEL-like equatorial domain 0.9063 338 378 1.10.560.10
af_A1ZBG9_351_650_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9 306 609 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A7W1QEW1-F1-model_v4 Beta-galactosidase 0.9868 24 616 GO:0004553
GO:0005975
AF-A0A7K0R8P9-F1-model_v4 Glycoside hydrolase family 2 0.9825 23 485 GO:0004553
GO:0005975
AF-H0E933-F1-model_v4 Beta-galactosidase (EC 3.2.1.23) 0.976 23 619 GO:0004565
GO:0005975
AF-A0A838D294-F1-model_v4 Glycoside hydrolase family 2 catalytic domain-containing protein 0.9721 430 617 GO:0004566
GO:0005975
GO:0030246
AF-A0A2W6D5P3-F1-model_v4 Beta-galactosidase 0.9704 21 619 GO:0004553
GO:0005975

Map