F158119

General Info

Members Datasets Scaffolds Average Seq Length
133 97 266 368

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221613|2644081696
Length 404
Sequence LLESPDDAPQAGASTSQPRTHAAAQVHLPVRSEHAGIEPYGAPQLDVPVLLNVNENPYAPSAEVVATIAADVATAAATLNRYPDRDFLGLRQDLADYLAGESGVRVAPEQVWAANGSNEVMLHLLQAFGGPGRTALSFAPTYSMYPEYARDTSTAWVTGRRAEDFTLDPEAARAAIVAHAPSVILLASPNNPTGTALTREVVEAVCEAALAVTPHGAEPGTSAVVVVDEAYGEFRRAGVPSALELLERYPNLAVSRTMSKAFALAGARVGYLAASTTLVDALRVVRLPYHLSAATQAVARAALKHSSSLLAQVDALRAERDATVNWLRAQRPAALGGAVLQVADSDANFVLFGTFPDRHAVWQGLLDRGVLIRETGPEGWLRVSIGTPQEMTAFKDALVEVAGL

Samples

Sample ID Description Type Environment
1 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
4 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
5 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
6 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
9 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
11 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
12 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
15 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
16 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
17 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
18 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
24 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
25 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
26 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
27 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
28 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
29 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
30 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
31 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
32 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
33 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
34 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
35 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
36 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
37 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
38 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
39 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
40 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
41 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
42 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
43 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
44 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
45 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
46 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
47 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
48 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
49 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
50 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
51 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
52 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
53 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
55 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
66 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
67 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
68 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
69 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
70 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
71 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
72 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
73 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
75 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
76 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
77 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
78 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
79 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
80 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
81 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
82 2643221613 Oerskovia sp. Root22 Isolate Unclassified
83 2643221604 Nocardioides sp. Root190 Isolate Unclassified
84 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
85 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
86 2643221721 Oerskovia sp. Root918 Isolate Unclassified
87 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
88 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
89 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
90 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
91 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
92 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
93 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
94 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
95 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
96 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
97 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 85.71
Metatranscriptomes 1.5
Isolates 12.78

Biome Distribution

Category Percentage (%)
Aerial Root 1.5
Bulb 0
Endosphere 0.75
Nodule 0
Rhizoplane 1.5
Rhizosphere 77.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0007423J48922_100139 3300003285 Bacteria 33024
2 Ga0070668_100295568 3300005347 Bacteria 1357
3 Ga0070659_100001990 3300005366 Bacteria 14601
4 Ga0070706_100279471 3300005467 Bacteria 1558
5 Ga0068855_100014121 3300005563 Bacteria 9623
6 Ga0068855_100290901 3300005563 Bacteria 1811
7 Ga0070702_100079378 3300005615 Bacteria 1961
8 Ga0081455_10052313 3300005937 Bacteria 3497
9 Ga0081538_10000005 3300005981 Bacteria 187304
10 Ga0081538_10053924 3300005981 Bacteria 2384
11 Ga0081539_10131734 3300005985 Bacteria 1227
12 Ga0075428_100011013 3300006844 Bacteria 10058
13 Ga0075429_100049054 3300006880 Bacteria 3671
14 Ga0114129_10049191 3300009147 Bacteria 5925
15 Ga0105243_10085278 3300009148 Bacteria 2588
16 Ga0105243_10225703 3300009148 Bacteria 1658
17 Ga0105238_10056222 3300009551 Bacteria 3948
18 Ga0105239_10170779 3300010375 Bacteria 2432
19 Ga0206353_10806076 3300020082 Bacteria 3413
20 Ga0213875_10000758 3300021388 Bacteria 24340
21 Ga0207647_10117830 3300025904 Bacteria 1567
22 Ga0207694_10043036 3300025924 Bacteria 3485
23 Ga0207667_10126269 3300025949 Bacteria 2635
24 Ga0207667_10253448 3300025949 Bacteria 1800
25 Ga0207674_10188071 3300026116 Bacteria 2015
26 Ga0207675_100022886 3300026118 Bacteria 5812
27 Ga0307512_10089043 3300030522 Bacteria 2162
28 Ga0307413_10050935 3300031824 Bacteria 2492
29 Ga0307410_10059726 3300031852 Bacteria 2604
30 Ga0307409_100198175 3300031995 Bacteria 1794
31 Ga0395898_0108120 3300037466 Bacteria 2667
32 Ga0436364_0086889 3300037853 Bacteria 54583
33 Ga0436365_1735070 3300039437 Bacteria 3242
34 Ga0439457_034485 3300042014 Bacteria 1125
35 Ga0439463_020944 3300042016 Bacteria 1632
36 Ga0466972_0033519 3300044658 Bacteria 2518
37 Ga0466965_0014579 3300044683 Bacteria 3722
38 Ga0466965_0035629 3300044683 Bacteria 2438
39 Ga0466965_0061102 3300044683 Bacteria 1883
40 Ga0466965_0073725 3300044683 Bacteria 1719
41 Ga0466963_0028667 3300044694 Bacteria 3577
42 Ga0466963_0042824 3300044694 Bacteria 2974
43 Ga0466963_0047377 3300044694 Bacteria 2837
44 Ga0466964_0017307 3300044706 Bacteria 2757
45 Ga0466971_0005451 3300044719 Bacteria 5521
46 Ga0466971_0019885 3300044719 Bacteria 2983
47 Ga0466970_0017464 3300044765 Bacteria 3708
48 Ga0466970_0114328 3300044765 Bacteria 1475
49 Ga0466957_0016354 3300044842 Bacteria 4339
50 Ga0466957_0029563 3300044842 Bacteria 3268
51 Ga0466957_0032774 3300044842 Bacteria 3113
52 Ga0466960_0000528 3300044901 Bacteria 13102
53 Ga0466960_0005164 3300044901 Bacteria 5163
54 Ga0466960_0154273 3300044901 Bacteria 1229
55 Ga0466960_0164112 3300044901 Bacteria 1195
56 Ga0466958_0018570 3300045836 Bacteria 4038
57 Ga0466958_0034789 3300045836 Bacteria 3008
58 Ga0466967_0000912 3300045976 Bacteria 15866
59 Ga0466967_0038983 3300045976 Bacteria 4080
60 Ga0496109_0111458 3300048912 Bacteria 2544
61 Ga0496114_0347224 3300048917 Bacteria 1312
62 Ga0496117_0103037 3300048920 Bacteria 1800
63 Ga0496118_0073920 3300048921 Bacteria 2439
64 Ga0496119_0000287 3300048922 Bacteria 70711
65 Ga0496120_0016091 3300048923 Bacteria 4900
66 Ga0496122_0000911 3300048925 Bacteria 54375
67 Ga0496122_0001286 3300048925 Bacteria 41681
68 Ga0496123_0001055 3300048926 Bacteria 41698
69 Ga0496124_0002228 3300048927 Bacteria 25820
70 Ga0496124_0189946 3300048927 Bacteria 1573
71 Ga0496124_0190443 3300048927 Bacteria 1570
72 Ga0496125_0000172 3300048928 Bacteria 144915
73 Ga0496125_0001197 3300048928 Bacteria 39065
74 Ga0496126_0092040 3300048929 Bacteria 2665
75 Ga0501031_0016632 3300049568 Bacteria 4776
76 Ga0501031_0061072 3300049568 Bacteria 2456
77 Ga0501032_0041272 3300049569 Bacteria 3134
78 Ga0501033_0094137 3300049570 Bacteria 2191
79 Ga0501033_0146913 3300049570 Bacteria 1702
80 Ga0501033_0226833 3300049570 Bacteria 1328
81 Ga0501034_0005562 3300049571 Bacteria 13733
82 Ga0501034_0008156 3300049571 Bacteria 11105
83 Ga0501034_0165038 3300049571 Bacteria 2184
84 Ga0501036_0047971 3300049572 Bacteria 3616
85 Ga0501036_0104563 3300049572 Bacteria 2394
86 Ga0501038_0000236 3300049574 Bacteria 46834
87 Ga0501038_0053606 3300049574 Bacteria 3471
88 Ga0501039_0103579 3300049575 Bacteria 2221
89 Ga0501039_0261857 3300049575 Bacteria 1359
90 Ga0501040_0002565 3300049576 Bacteria 11713
91 Ga0501042_0011164 3300049578 Bacteria 6052
92 Ga0501042_0134721 3300049578 Bacteria 1781
93 Ga0501043_0035910 3300049579 Bacteria 3900
94 Ga0501046_0001520 3300049580 Bacteria 22125
95 Ga0501046_0058812 3300049580 Bacteria 3012
96 Ga0501048_0020460 3300049582 Bacteria 4849
97 Ga0501067_0020835 3300049583 Bacteria 3628
98 Ga0501068_0015763 3300049584 Bacteria 4347
99 Ga0501070_0142485 3300049586 Bacteria 1979
100 Ga0501071_0116301 3300049587 Bacteria 1979
101 Ga0501072_0039669 3300049588 Bacteria 3696
102 Ga0501075_0085366 3300049591 Bacteria 2392
103 Ga0501076_0040220 3300049592 Bacteria 3673
104 Ga0501083_0016180 3300049744 Bacteria 5222
105 Ga0501035_0012431 3300049822 Bacteria 7868
106 Ga0501035_0016477 3300049822 Bacteria 6815
107 Ga0501044_0091702 3300049823 Bacteria 3065
108 Ga0501044_0113866 3300049823 Bacteria 2711
109 nmdc:mga05p37_107739_c1 3300050507 Bacteria 3428
110 Ga0495655_0010119 3300053083 Bacteria 1851
111 Ga0500556_0001531 3300053104 Bacteria 9469
112 Ga0501084_0057999 3300054114 Bacteria 3239
113 Ga0501082_0006216 3300060353 Bacteria 10369
114 Ga0501082_0006677 3300060353 Bacteria 9982
115 Ga0466962_0057404 3300061719 Bacteria 1858
116 Ga0530510_0081111 3300061734 Bacteria 2361
117 2644081696 2643221613 Bacteria 4622396
118 2644034512 2643221604 Bacteria 5014917
119 2644506461 2643221690 Bacteria 4654705
120 2644526621 2643221694 Bacteria 4392972
121 2644665261 2643221721 Bacteria 4486924
122 2644671287 2643221722 Bacteria 4247614
123 2729906151 2728369276 Bacteria 5610032
124 2816425286 2816332119 Bacteria 8120218
125 2835189348 2835188231 Bacteria 3476928
126 2839986325 2839986021 Bacteria 3685650
127 2884995150 2884994152 Bacteria 4492978
128 2884996993 2884994152 Bacteria 4492978
129 2887447570 2887443736 Bacteria 4426037
130 2932433622 2932431166 Bacteria 4215299
131 2935891425 2935890801 Bacteria 4593001
132 2984580597 2984576629 Bacteria 4248407
133 2990258289 2990256926 Bacteria 4252839
134 Ga0007423J48922_100139
135 Ga0070668_100295568
136 Ga0070659_100001990
137 Ga0070706_100279471
138 Ga0068855_100014121
139 Ga0068855_100290901
140 Ga0070702_100079378
141 Ga0081455_10052313
142 Ga0081538_10000005
143 Ga0081538_10053924
144 Ga0081539_10131734
145 Ga0075428_100011013
146 Ga0075429_100049054
147 Ga0114129_10049191
148 Ga0105243_10085278
149 Ga0105243_10225703
150 Ga0105238_10056222
151 Ga0105239_10170779
152 Ga0206353_10806076
153 Ga0213875_10000758
154 Ga0207647_10117830
155 Ga0207694_10043036
156 Ga0207667_10126269
157 Ga0207667_10253448
158 Ga0207674_10188071
159 Ga0207675_100022886
160 Ga0307512_10089043
161 Ga0307413_10050935
162 Ga0307410_10059726
163 Ga0307409_100198175
164 Ga0395898_0108120
165 Ga0436364_0086889
166 Ga0436365_1735070
167 Ga0439457_034485
168 Ga0439463_020944
169 Ga0466972_0033519
170 Ga0466965_0014579
171 Ga0466965_0035629
172 Ga0466965_0061102
173 Ga0466965_0073725
174 Ga0466963_0028667
175 Ga0466963_0042824
176 Ga0466963_0047377
177 Ga0466964_0017307
178 Ga0466971_0005451
179 Ga0466971_0019885
180 Ga0466970_0017464
181 Ga0466970_0114328
182 Ga0466957_0016354
183 Ga0466957_0029563
184 Ga0466957_0032774
185 Ga0466960_0000528
186 Ga0466960_0005164
187 Ga0466960_0154273
188 Ga0466960_0164112
189 Ga0466958_0018570
190 Ga0466958_0034789
191 Ga0466967_0000912
192 Ga0466967_0038983
193 Ga0496109_0111458
194 Ga0496114_0347224
195 Ga0496117_0103037
196 Ga0496118_0073920
197 Ga0496119_0000287
198 Ga0496120_0016091
199 Ga0496122_0000911
200 Ga0496122_0001286
201 Ga0496123_0001055
202 Ga0496124_0002228
203 Ga0496124_0189946
204 Ga0496124_0190443
205 Ga0496125_0000172
206 Ga0496125_0001197
207 Ga0496126_0092040
208 Ga0501031_0016632
209 Ga0501031_0061072
210 Ga0501032_0041272
211 Ga0501033_0094137
212 Ga0501033_0146913
213 Ga0501033_0226833
214 Ga0501034_0005562
215 Ga0501034_0008156
216 Ga0501034_0165038
217 Ga0501036_0047971
218 Ga0501036_0104563
219 Ga0501038_0000236
220 Ga0501038_0053606
221 Ga0501039_0103579
222 Ga0501039_0261857
223 Ga0501040_0002565
224 Ga0501042_0011164
225 Ga0501042_0134721
226 Ga0501043_0035910
227 Ga0501046_0001520
228 Ga0501046_0058812
229 Ga0501048_0020460
230 Ga0501067_0020835
231 Ga0501068_0015763
232 Ga0501070_0142485
233 Ga0501071_0116301
234 Ga0501072_0039669
235 Ga0501075_0085366
236 Ga0501076_0040220
237 Ga0501083_0016180
238 Ga0501035_0012431
239 Ga0501035_0016477
240 Ga0501044_0091702
241 Ga0501044_0113866
242 nmdc:mga05p37_107739_c1
243 Ga0495655_0010119
244 Ga0500556_0001531
245 Ga0501084_0057999
246 Ga0501082_0006216
247 Ga0501082_0006677
248 Ga0466962_0057404
249 Ga0530510_0081111
250 2644081696
251 2644034512
252 2644506461
253 2644526621
254 2644665261
255 2644671287
256 2729906151
257 2816425286
258 2835189348
259 2839986325
260 2884995150
261 2884996993
262 2887447570
263 2932433622
264 2935891425
265 2984580597
266 2990258289

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

47

398

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cq5-assembly1.cif.gz_B histidinol-phosphate aminotransferase from corynebacterium glutamicum in complex with pmp 0.9702 33 393
4r8d-assembly1.cif.gz_A crystal structure of rv1600 encoded aminotransferase in complex with plp-mes from mycobacterium tuberculosis 0.9701 33 393
3cq4-assembly1.cif.gz_A histidinol-phosphate aminotransferase from corynebacterium glutamicum 0.9471 33 394
3cq4-assembly1.cif.gz_B histidinol-phosphate aminotransferase from corynebacterium glutamicum 0.9468 33 391
3cq5-assembly1.cif.gz_B histidinol-phosphate aminotransferase from corynebacterium glutamicum in complex with pmp 0.939 33 393
ID Description Score Start End Superfamily
af_P9WML7_56_276_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9753 77 301 3.40.640.10
af_P9WML7_277_364_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9642 303 388 3.90.1150.10
af_P9WML7_56_276_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9623 77 301 3.40.640.10
3cq4B01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9385 302 391 3.90.1150.10
4r8dA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9377 301 393 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A6N9XTK1-F1-model_v4 deleted 0.9794 248 391
AF-A0A6C9EIB7-F1-model_v4 Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) 0.978 115 391 GO:0000105
GO:0004400
GO:0030170
AF-A0A7D3ZL03-F1-model_v4 Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) 0.974 33 391 GO:0000105
GO:0004400
GO:0030170
AF-A0A1E9ZVW2-F1-model_v4 deleted 0.9736 33 393
AF-A0A3A4AV52-F1-model_v4 Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) 0.9708 33 392 GO:0000105
GO:0004400
GO:0030170

Map