F158103

General Info

Members Datasets Scaffolds Average Seq Length
133 92 124 450

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2571042588|2573038569
Length 515
Sequence NVVKNKKDNQFALLFDINGSFLQAFSLLNRPPVNFSQKYCMEIAQANLPVPLYADIRSKITLREDEIDFICELNAELLEKISRLEILSKVESYYELFHSERNKDFDPDQTPVSYGGRVYDEKEMRSLVDSSLDFWLTAGRYNKQFEKEYAEYLGVRYALLTNSGSSANLLAFSALTSPKLKDRQIKPGDEVITVAAGFPTTVTPIVQNGAVPVFIDVELGTYNIMVDRIEEAITPKTKAIMVAHTMGNPFELDKVMEIAKKYNLWVIEDNCDSLGSTFNGKLTGTHGHIGTSSFYPPHHMTMGEGGAVYTNNAQLKSIIESFRDWGRDCWCPSGCDNTCNKRFGWELGSLPFGYDHKYTYSHIGYNLRVTEMQAAIGVEQLKKVPAFTEARKQNFARLYEGLKDLGDYFILPRATRNSDPSWFGFMLTVRDSAKFSKNEIVEYLEANRIQTRMLFAGNLTRQPAFQNVNYRISGELTNTDKIMNDTFLVGVYPGLTEEKINYVVNKIREFVLGKN

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
3 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
4 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
5 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
6 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
7 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
21 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
22 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
30 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
31 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
36 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
37 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
39 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
46 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
47 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
48 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
51 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
52 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
53 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
54 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
55 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
58 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
61 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
67 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
68 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
69 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
70 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
71 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
72 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
73 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
76 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
77 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
78 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
79 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
80 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
81 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
82 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
83 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
86 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
87 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
88 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
89 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
90 8054002106 Azospirillum lipoferum 59b Isolate Unclassified
91 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
92 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.23
Metatranscriptomes 0
Isolates 6.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.52
Nodule 3.76
Rhizoplane 9.02
Rhizosphere 68.42
Stem 0
Stem Tuber 0
Unclassified 11.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_6087390 2162886012 Unclassified 3845
2 Ga0065712_10087830 3300005290 Bacteria 2553
3 Ga0065715_10089530 3300005293 Bacteria 9634
4 Ga0070690_100018194 3300005330 Bacteria 4240
5 Ga0070689_100107470 3300005340 Bacteria 2215
6 Ga0070691_10010347 3300005341 Bacteria 4256
7 Ga0070700_100000001 3300005441 Bacteria 346167
8 Ga0070663_100001077 3300005455 Bacteria 14953
9 Ga0070681_10023237 3300005458 Bacteria 6233
10 Ga0068863_100000449 3300005841 Bacteria 41845
11 Ga0068858_100157786 3300005842 Bacteria 2135
12 Ga0081455_10000051 3300005937 Bacteria 123542
13 Ga0097621_100215033 3300006237 Bacteria 1673
14 Ga0079104_1000163 3300006946 Bacteria 94189
15 Ga0099794_10000279 3300007265 Bacteria 17612
16 Ga0105251_10059938 3300009011 Bacteria 1793
17 Ga0111539_10051784 3300009094 Bacteria 4888
18 Ga0105241_10022156 3300009174 Bacteria 4703
19 Ga0105248_10019804 3300009177 Bacteria 7452
20 Ga0105237_10005719 3300009545 Bacteria 13977
21 Ga0157378_10024889 3300013297 Bacteria 5272
22 Ga0163163_10009106 3300014325 Bacteria 8846
23 Ga0157379_10019610 3300014968 Bacteria 5974
24 Ga0157376_10033966 3300014969 Bacteria 4113
25 Ga0213873_10000018 3300021358 Bacteria 123140
26 Ga0213876_10000058 3300021384 Bacteria 134080
27 Ga0213876_10003656 3300021384 Bacteria 8742
28 Ga0209566_103790 3300025225 Unclassified 2205
29 Ga0209147_104389 3300025229 Bacteria 2365
30 Ga0207425_1000593 3300025245 Bacteria 21092
31 Ga0209025_1013609 3300025294 Bacteria 5093
32 Ga0209564_1000042 3300025295 Bacteria 392805
33 Ga0209758_1004286 3300025297 Bacteria 12032
34 Ga0207713_1056862 3300025735 Bacteria 1516
35 Ga0207707_10082940 3300025912 Bacteria 2799
36 Ga0207671_10005299 3300025914 Bacteria 11949
37 Ga0207706_10063097 3300025933 Bacteria 3263
38 Ga0207708_10000118 3300026075 Bacteria 60843
39 Ga0207641_10000111 3300026088 Bacteria 120527
40 Ga0209281_1000064 3300027111 Bacteria 287876
41 Ga0209389_1000144 3300027296 Bacteria 61045
42 Ga0209489_100625 3300027361 Bacteria 68635
43 Ga0209588_1002925 3300027671 Bacteria 4692
44 Ga0268264_10060255 3300028381 Bacteria 3181
45 Ga0265336_10006961 3300028666 Bacteria 4049
46 Ga0265325_10000271 3300031241 Bacteria 36968
47 Ga0316579_10014836 3300031691 Bacteria 3377
48 Ga0265314_10000756 3300031711 Bacteria 38675
49 Ga0373928_0000397 3300035084 Bacteria 8677
50 Ga0373947_0123529 3300035725 Bacteria 1646
51 Ga0395905_0000114 3300037471 Bacteria 134334
52 Ga0400484_25202 3300038725 Bacteria 8599
53 Ga0400490_36016 3300038726 Bacteria 2401
54 Ga0436365_0337700 3300039437 Bacteria 40984
55 Ga0436365_1806815 3300039437 Bacteria 14007
56 Ga0436362_0011715 3300039453 Bacteria 44760
57 Ga0439464_0026294 3300042439 Bacteria 1614
58 Ga0451577_0000219 3300042876 Bacteria 118088
59 Ga0451577_0001394 3300042876 Bacteria 32357
60 Ga0451577_0004482 3300042876 Bacteria 14730
61 Ga0451577_0028160 3300042876 Bacteria 5083
62 Ga0451577_0049294 3300042876 Bacteria 3761
63 Ga0451577_0062127 3300042876 Bacteria 3331
64 Ga0451577_0102180 3300042876 Bacteria 2561
65 Ga0451577_0117068 3300042876 Unclassified 2387
66 Ga0451577_0208615 3300042876 Bacteria 1764
67 Ga0453683_0000034 3300044673 Bacteria 235218
68 Ga0453683_0008355 3300044673 Bacteria 6950
69 Ga0453683_0008481 3300044673 Bacteria 6895
70 Ga0453683_0013262 3300044673 Bacteria 5387
71 Ga0453683_0016769 3300044673 Bacteria 4722
72 Ga0453683_0021762 3300044673 Bacteria 4091
73 Ga0453684_0000153 3300044712 Bacteria 305116
74 Ga0453684_0000210 3300044712 Bacteria 255463
75 Ga0453684_0000381 3300044712 Bacteria 181609
76 Ga0453684_0000385 3300044712 Bacteria 180971
77 Ga0453684_0000734 3300044712 Bacteria 114826
78 Ga0453684_0000986 3300044712 Bacteria 92924
79 Ga0453684_0001118 3300044712 Bacteria 84057
80 Ga0453684_0001345 3300044712 Bacteria 72030
81 Ga0453684_0016245 3300044712 Bacteria 11662
82 Ga0453684_0023343 3300044712 Bacteria 9119
83 Ga0453684_0025671 3300044712 Bacteria 8545
84 Ga0453684_0028760 3300044712 Bacteria 7914
85 Ga0453684_0085354 3300044712 Unclassified 3922
86 Ga0453684_0123249 3300044712 Bacteria 3125
87 Ga0453684_0196304 3300044712 Bacteria 2357
88 Ga0453684_0316459 3300044712 Bacteria 1769
89 Ga0451576_0000312 3300045051 Bacteria 117649
90 Ga0451576_0003256 3300045051 Bacteria 22524
91 Ga0451576_0022097 3300045051 Bacteria 6903
92 Ga0451576_0022540 3300045051 Bacteria 6827
93 Ga0451576_0022786 3300045051 Bacteria 6785
94 Ga0451576_0033627 3300045051 Bacteria 5450
95 Ga0451576_0159820 3300045051 Bacteria 2351
96 Ga0495650_0000854 3300046471 Bacteria 36598
97 Ga0495605_0000288 3300046474 Bacteria 55646
98 Ga0495637_0000573 3300046520 Bacteria 26187
99 Ga0495654_0000014 3300046530 Bacteria 312126
100 Ga0495597_0000069 3300046542 Bacteria 89990
101 Ga0495668_0000312 3300046616 Bacteria 66963
102 Ga0495680_0109521 3300047322 Bacteria 2048
103 Ga0496101_0265720 3300048904 Bacteria 1339
104 Ga0496102_0002969 3300048905 Bacteria 14359
105 Ga0496103_0061043 3300048906 Bacteria 2344
106 Ga0496107_0048376 3300048910 Bacteria 3063
107 Ga0496108_0004052 3300048911 Bacteria 11760
108 Ga0496109_0014677 3300048912 Bacteria 6817
109 Ga0496109_0090344 3300048912 Bacteria 2833
110 Ga0496111_0094418 3300048914 Bacteria 2193
111 Ga0496113_0026368 3300048916 Bacteria 4154
112 Ga0496115_0007146 3300048918 Bacteria 8199
113 Ga0496115_0008947 3300048918 Bacteria 7428
114 Ga0496115_0070925 3300048918 Bacteria 2825
115 Ga0496116_0035358 3300048919 Bacteria 3510
116 Ga0496125_0001157 3300048928 Bacteria 39930
117 Ga0496125_0095017 3300048928 Unclassified 2219
118 Ga0501036_0069218 3300049572 Bacteria 2986
119 Ga0501269_000497 3300049766 Bacteria 8141
120 Ga0495601_0069824 3300053077 Bacteria 2241
121 Ga0500594_0005177 3300053118 Bacteria 2888
122 Ga0500618_000643 3300053125 Bacteria 20798
123 Ga0500618_010821 3300053125 Bacteria 2437
124 Ga0500627_0020808 3300053158 Bacteria 2637

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048904 Ga0496101_0265720 Ga0496101_0265720_169_1326 381
2 3300009094 Ga0111539_10051784 Ga0111539_100517843 412
3 iso_pu_bacteria 2842333319 2842338448 419
4 3300044673 Ga0453683_0021762 Ga0453683_0021762_1267_2619 426
5 iso_pu_bacteria 8054002106 8054002134 427
6 3300005841 Ga0068863_100000449 Ga0068863_10000044921 430
7 3300026088 Ga0207641_10000111 Ga0207641_1000011162 430
8 3300042876 Ga0451577_0049294 Ga0451577_0049294_2143_3477 432
9 3300044673 Ga0453683_0008481 Ga0453683_0008481_3694_5028 432
10 3300044712 Ga0453684_0000153 Ga0453684_0000153_97259_98593 432
11 3300045051 Ga0451576_0000312 Ga0451576_0000312_35769_37103 432
12 3300005341 Ga0070691_10010347 Ga0070691_100103474 433
13 3300005455 Ga0070663_100001077 Ga0070663_1000010776 433
14 3300005458 Ga0070681_10023237 Ga0070681_100232372 433
15 3300006237 Ga0097621_100215033 Ga0097621_1002150331 433
16 3300009174 Ga0105241_10022156 Ga0105241_100221564 433
17 3300013297 Ga0157378_10024889 Ga0157378_100248894 433
18 3300014969 Ga0157376_10033966 Ga0157376_100339663 433
19 3300025912 Ga0207707_10082940 Ga0207707_100829403 433
20 3300025933 Ga0207706_10063097 Ga0207706_100630972 433
21 3300028666 Ga0265336_10006961 Ga0265336_100069612 433
22 3300035084 Ga0373928_0000397 Ga0373928_0000397_3927_5276 433
23 3300042876 Ga0451577_0001394 Ga0451577_0001394_3171_4493 433
24 3300042876 Ga0451577_0117068 Ga0451577_0117068_430_1782 433
25 3300044673 Ga0453683_0000034 Ga0453683_0000034_91220_92572 433
26 3300044712 Ga0453684_0000210 Ga0453684_0000210_214002_215384 433
27 3300044712 Ga0453684_0000381 Ga0453684_0000381_118459_119781 433
28 3300044712 Ga0453684_0000385 Ga0453684_0000385_54480_55805 433
29 3300044712 Ga0453684_0023343 Ga0453684_0023343_205_1557 433
30 3300044712 Ga0453684_0028760 Ga0453684_0028760_4707_6056 433
31 3300044712 Ga0453684_0316459 Ga0453684_0316459_274_1623 433
32 3300045051 Ga0451576_0003256 Ga0451576_0003256_9205_10527 433
33 3300045051 Ga0451576_0022540 Ga0451576_0022540_5037_6386 433
34 3300045051 Ga0451576_0033627 Ga0451576_0033627_2356_3708 433
35 3300045051 Ga0451576_0159820 Ga0451576_0159820_788_2137 433
36 3300048905 Ga0496102_0002969 Ga0496102_0002969_6785_8125 433
37 3300048906 Ga0496103_0061043 Ga0496103_0061043_870_2210 433
38 3300048910 Ga0496107_0048376 Ga0496107_0048376_423_1763 433
39 3300048918 Ga0496115_0007146 Ga0496115_0007146_5215_6555 433
40 3300048918 Ga0496115_0070925 Ga0496115_0070925_673_2013 433
41 3300048928 Ga0496125_0001157 Ga0496125_0001157_33196_34545 433
42 3300053077 Ga0495601_0069824 Ga0495601_0069824_440_1780 433
43 3300005441 Ga0070700_100000001 Ga0070700_100000001107 434
44 3300006946 Ga0079104_1000163 Ga0079104_100016335 434
45 3300007265 Ga0099794_10000279 Ga0099794_1000027914 434
46 3300025229 Ga0209147_104389 Ga0209147_1043891 434
47 3300025245 Ga0207425_1000593 Ga0207425_10005939 434
48 3300025294 Ga0209025_1013609 Ga0209025_10136092 434
49 3300025295 Ga0209564_1000042 Ga0209564_1000042268 434
50 3300025297 Ga0209758_1004286 Ga0209758_10042869 434
51 3300026075 Ga0207708_10000118 Ga0207708_1000011865 434
52 3300027111 Ga0209281_1000064 Ga0209281_1000064235 434
53 3300027296 Ga0209389_1000144 Ga0209389_100014447 434
54 3300027361 Ga0209489_100625 Ga0209489_10062547 434
55 3300027671 Ga0209588_1002925 Ga0209588_10029253 434
56 3300031241 Ga0265325_10000271 Ga0265325_1000027120 434
57 3300031711 Ga0265314_10000756 Ga0265314_1000075632 434
58 3300038725 Ga0400484_25202 Ga0400484_25202_5821_7140 434
59 3300038726 Ga0400490_36016 Ga0400490_36016_733_2052 434
60 3300042876 Ga0451577_0000219 Ga0451577_0000219_9444_10769 434
61 3300042876 Ga0451577_0004482 Ga0451577_0004482_3278_4639 434
62 3300042876 Ga0451577_0028160 Ga0451577_0028160_2768_4120 434
63 3300042876 Ga0451577_0062127 Ga0451577_0062127_1004_2329 434
64 3300042876 Ga0451577_0102180 Ga0451577_0102180_1185_2510 434
65 3300044673 Ga0453683_0008355 Ga0453683_0008355_3032_4351 434
66 3300044673 Ga0453683_0013262 Ga0453683_0013262_3091_4446 434
67 3300044673 Ga0453683_0016769 Ga0453683_0016769_2163_3518 434
68 3300044712 Ga0453684_0000734 Ga0453684_0000734_76342_77697 434
69 3300044712 Ga0453684_0001118 Ga0453684_0001118_5823_7133 434
70 3300044712 Ga0453684_0001345 Ga0453684_0001345_40581_41906 434
71 3300044712 Ga0453684_0016245 Ga0453684_0016245_5686_7011 434
72 3300044712 Ga0453684_0085354 Ga0453684_0085354_489_1847 434
73 3300044712 Ga0453684_0196304 Ga0453684_0196304_705_2066 434
74 3300045051 Ga0451576_0022786 Ga0451576_0022786_2213_3532 434
75 3300046471 Ga0495650_0000854 Ga0495650_0000854_23878_25203 434
76 3300046474 Ga0495605_0000288 Ga0495605_0000288_49406_50734 434
77 3300046520 Ga0495637_0000573 Ga0495637_0000573_11985_13310 434
78 3300046530 Ga0495654_0000014 Ga0495654_0000014_268447_269772 434
79 3300046542 Ga0495597_0000069 Ga0495597_0000069_13822_15147 434
80 3300046616 Ga0495668_0000312 Ga0495668_0000312_14922_16226 434
81 3300047322 Ga0495680_0109521 Ga0495680_0109521_529_1866 434
82 3300048919 Ga0496116_0035358 Ga0496116_0035358_343_1671 434
83 3300048928 Ga0496125_0095017 Ga0496125_0095017_340_1698 434
84 3300049766 Ga0501269_000497 Ga0501269_000497_1871_3175 434
85 3300053118 Ga0500594_0005177 Ga0500594_0005177_269_1621 434
86 3300053125 Ga0500618_000643 Ga0500618_000643_7742_9067 434
87 3300053158 Ga0500627_0020808 Ga0500627_0020808_551_1855 434
88 2162886012 MBSR1b_contig_6087390 MBSR1b_0406.00002310 435
89 3300005290 Ga0065712_10087830 Ga0065712_100878303 435
90 3300005293 Ga0065715_10089530 Ga0065715_100895303 435
91 3300005330 Ga0070690_100018194 Ga0070690_1000181942 435
92 3300005340 Ga0070689_100107470 Ga0070689_1001074702 435
93 3300005842 Ga0068858_100157786 Ga0068858_1001577862 435
94 3300005937 Ga0081455_10000051 Ga0081455_1000005170 435
95 3300009011 Ga0105251_10059938 Ga0105251_100599382 435
96 3300009177 Ga0105248_10019804 Ga0105248_100198044 435
97 3300009545 Ga0105237_10005719 Ga0105237_1000571914 435
98 3300014325 Ga0163163_10009106 Ga0163163_100091068 435
99 3300014968 Ga0157379_10019610 Ga0157379_100196102 435
100 3300021358 Ga0213873_10000018 Ga0213873_10000018133 435
101 3300021384 Ga0213876_10000058 Ga0213876_10000058138 435
102 3300021384 Ga0213876_10003656 Ga0213876_100036564 435
103 3300025225 Ga0209566_103790 Ga0209566_1037901 435
104 3300025735 Ga0207713_1056862 Ga0207713_10568622 435
105 3300025914 Ga0207671_10005299 Ga0207671_100052996 435
106 3300028381 Ga0268264_10060255 Ga0268264_100602553 435
107 3300031691 Ga0316579_10014836 Ga0316579_100148362 435
108 3300035725 Ga0373947_0123529 Ga0373947_0123529_131_1555 435
109 3300037471 Ga0395905_0000114 Ga0395905_0000114_56692_58050 435
110 3300039437 Ga0436365_0337700 Ga0436365_0337700_36715_38097 435
111 3300039437 Ga0436365_1806815 Ga0436365_1806815_9140_10501 435
112 3300039453 Ga0436362_0011715 Ga0436362_0011715_40116_41498 435
113 3300042439 Ga0439464_0026294 Ga0439464_0026294_118_1461 435
114 3300042876 Ga0451577_0208615 Ga0451577_0208615_54_1418 435
115 3300044712 Ga0453684_0000986 Ga0453684_0000986_42027_43394 435
116 3300044712 Ga0453684_0025671 Ga0453684_0025671_4023_5390 435
117 3300044712 Ga0453684_0123249 Ga0453684_0123249_554_1918 435
118 3300045051 Ga0451576_0022097 Ga0451576_0022097_3776_5140 435
119 3300048911 Ga0496108_0004052 Ga0496108_0004052_4699_6042 435
120 3300048912 Ga0496109_0014677 Ga0496109_0014677_1923_3266 435
121 3300048912 Ga0496109_0090344 Ga0496109_0090344_149_1486 435
122 3300048914 Ga0496111_0094418 Ga0496111_0094418_618_1961 435
123 3300048916 Ga0496113_0026368 Ga0496113_0026368_1476_2819 435
124 3300048918 Ga0496115_0008947 Ga0496115_0008947_4450_5760 435
125 3300049572 Ga0501036_0069218 Ga0501036_0069218_781_2151 435
126 3300053125 Ga0500618_010821 Ga0500618_010821_329_1672 435
127 iso_pu_bacteria 2571042588 2573038569 435
128 iso_pu_bacteria 2857453340 2857455291 435
129 iso_pu_bacteria 2897803580 2897804820 435
130 iso_pu_bacteria 2904162308 2904168049 435
131 iso_pu_bacteria 2968558590 2968560292 435
132 iso_pu_bacteria 8054465665 8054471381 435
133 iso_pu_bacteria 8056533031 8056533163 435

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

118

508

0.93

PF00155

Aminotran_1_2

Aminotransferase class I and II

122

271

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bb8-assembly1.cif.gz_B e1 dehydrase h220k mutant 0.9763 10 434
3bcx-assembly1.cif.gz_A e1 dehydrase 0.9752 10 434
3bcx-assembly1.cif.gz_B e1 dehydrase 0.9576 10 434
3bb8-assembly1.cif.gz_B e1 dehydrase h220k mutant 0.9512 10 434
3bcx-assembly1.cif.gz_A e1 dehydrase 0.9502 10 434
ID Description Score Start End Superfamily
3bcxB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9728 306 434 3.90.1150.10
3bb8A01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9661 10 303 3.40.640.10
3bcxB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.944 306 434 3.90.1150.10
3bb8A01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9333 10 303 3.40.640.10
5u1zA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9313 44 303 3.40.640.10
ID Description Score Start End GO Terms
AF-X1MUZ1-F1-model_v4 Lipopolysaccharide biosynthesis protein RfbH 0.9936 110 234 GO:0000271
GO:0008483
GO:0030170
AF-A0A3M7LIY0-F1-model_v4 deleted 0.9787 59 433
AF-A0A1V5DFS8-F1-model_v4 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.9742 294 435 GO:0000271
GO:0008483
GO:0030170
AF-X1MMC8-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.974 10 211 GO:0000271
GO:0008483
GO:0030170
AF-A0A354WGP8-F1-model_v4 Lipopolysaccharide biosynthesis protein RfbH 0.974 300 435 GO:0000271
GO:0008483
GO:0030170

Feature Viewer

pLDDT pTM Quality
91.79 0.91 High
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Predicted Structure (AlphaFold2)

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