F158042

General Info

Members Datasets Scaffolds Average Seq Length
133 71 128 230

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0008963|Ga0500616_0008963_4458_5264
Length 268
Sequence VPAVTHPVYFAVGLPKAFRALNNDLVHGEFYTSMLISIMKKKLVALTGAGISAESGIPTFRGTDGLWEGHRIEDVATPEGWAKNPELVLDFYNQRRKRALEVIPNRGHIVFAELEEYFDVTVVTQNVDNLHERAGSSKVIHLHGSLFESRSTKDQQLVYPIEGWELKMGDVCEKGSQLRPNIVWFGEMVPMMEVAAEIAFEADYFIVAGTSMLVYPAAGLIEYVKREIPKYIVDPNKPQVSAGPSVHFIVEKGSVGMEKVKEILLRER

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
3 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
4 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
5 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
6 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
7 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
29 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
36 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
37 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
40 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
41 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
42 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
43 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
44 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
45 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
46 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
47 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
48 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
49 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
50 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
51 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
52 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
53 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
54 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
55 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
56 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
57 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
58 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
59 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
60 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
61 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
62 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
64 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
65 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
66 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
67 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
68 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
69 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
70 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
71 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.49
Metatranscriptomes 0
Isolates 4.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.52
Nodule 0
Rhizoplane 0
Rhizosphere 67.67
Stem 0
Stem Tuber 0
Unclassified 24.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3235243 2162886007 Bacteria 1817
2 rootH1_10000132 3300003316 Bacteria 16413
3 rootH1_10000209 3300003316 Bacteria 12156
4 rootH2_10029927 3300003320 Bacteria 24231
5 rootH2_10264288 3300003320 Unclassified 2406
6 rootH2_10306159 3300003320 Bacteria 1276
7 rootL2_10002427 3300003322 Bacteria 15148
8 rootL2_10021873 3300003322 Bacteria 13906
9 rootL2_10217985 3300003322 Bacteria 3150
10 rootH1_10001325 3300003323 Bacteria 38210
11 rootH1_10001636 3300003323 Bacteria 76904
12 rootH1_10010281 3300003323 Bacteria 22319
13 rootH1_10010912 3300003316 Bacteria 5960
14 rootH1_10010912 3300003323 Bacteria 3133
15 rootH1_10010913 3300003323 Bacteria 4883
16 rootH1_10072441 3300003323 Unclassified 1212
17 rootH1_10222955 3300003323 Unclassified 1681
18 rootH1_10265789 3300003323 Bacteria 1369
19 rootH1_10269451 3300003323 Bacteria 1315
20 rootH1_10366746 3300003323 Bacteria 2222
21 Ga0055530_10027722 3300003791 Bacteria 1542
22 Ga0055531_10000087 3300003794 Bacteria 101553
23 Ga0065165_1000724 3300005262 Bacteria 46099
24 Ga0065704_10000423 3300005289 Bacteria 22084
25 Ga0065704_10107482 3300005289 Bacteria 2052
26 Ga0065704_10117846 3300005289 Bacteria 1827
27 Ga0065715_10128614 3300005293 Bacteria 2061
28 Ga0070686_100021917 3300005544 Bacteria 3802
29 Ga0068857_100243411 3300005577 Bacteria 1647
30 Ga0068864_100223527 3300005618 Bacteria 1738
31 Ga0068851_10000066 3300005834 Bacteria 58581
32 Ga0075428_100082632 3300006844 Unclassified 3505
33 Ga0075431_100393917 3300006847 Unclassified 1387
34 Ga0111539_10050160 3300009094 Bacteria 4972
35 Ga0105243_10000007 3300009148 Bacteria 445042
36 Ga0157371_10000271 3300013102 Bacteria 70593
37 Ga0157370_10001753 3300013104 Bacteria 26733
38 Ga0157370_10357848 3300013104 Unclassified 1345
39 Ga0157369_10000815 3300013105 Bacteria 39822
40 Ga0157380_10453799 3300014326 Unclassified 1232
41 Ga0209050_1000879 3300025298 Bacteria 40293
42 Ga0209257_1000006 3300025304 Bacteria 1570111
43 Ga0207656_10000099 3300025321 Bacteria 31935
44 Ga0207709_10000033 3300025935 Bacteria 320483
45 Ga0207702_10489450 3300026078 Bacteria 1198
46 Ga0207676_10162375 3300026095 Unclassified 1937
47 Ga0265323_10002141 3300028653 Bacteria 9206
48 Ga0265336_10054294 3300028666 Bacteria 1207
49 Ga0307515_10000001 3300028794 Bacteria 4259510
50 Ga0307515_10000016 3300028794 Bacteria 554870
51 Ga0265338_10007257 3300028800 Bacteria 13834
52 Ga0265316_10002758 3300031344 Bacteria 17993
53 Ga0265316_10025005 3300031344 Bacteria 4989
54 Ga0307509_10072800 3300031507 Bacteria 3579
55 Ga0316576_10194723 3300031727 Bacteria 1527
56 Ga0316576_10214188 3300031727 Bacteria 1449
57 Ga0316578_10020517 3300031728 Unclassified 3653
58 Ga0316577_10011850 3300031733 Bacteria 4735
59 Ga0316585_10001197 3300032137 Bacteria 6774
60 Ga0316585_10013810 3300032137 Unclassified 2408
61 Ga0316584_0007511 3300036712 Bacteria 7463
62 Ga0400483_154929 3300039062 Bacteria 1461
63 Ga0400483_179170 3300039062 Bacteria 1591
64 Ga0400489_90346 3300039093 Unclassified 1021
65 Ga0451577_0000015 3300042876 Bacteria 538333
66 Ga0451577_0005775 3300042876 Bacteria 12540
67 Ga0451577_0013448 3300042876 Bacteria 7658
68 Ga0451577_0043147 3300042876 Bacteria 4040
69 Ga0451577_0112574 3300042876 Unclassified 2436
70 Ga0451577_0135662 3300042876 Bacteria 2210
71 Ga0451577_0176167 3300042876 Bacteria 1928
72 Ga0451577_0217324 3300042876 Bacteria 1727
73 Ga0451577_0339636 3300042876 Bacteria 1362
74 Ga0451577_0428899 3300042876 Bacteria 1200
75 Ga0451577_0559572 3300042876 Unclassified 1038
76 Ga0453683_0029376 3300044673 Unclassified 3476
77 Ga0453683_0032209 3300044673 Bacteria 3309
78 Ga0453683_0056867 3300044673 Unclassified 2448
79 Ga0453683_0113331 3300044673 Bacteria 1706
80 Ga0453683_0213397 3300044673 Unclassified 1226
81 Ga0466964_0140105 3300044706 Bacteria 1111
82 Ga0453684_0000474 3300044712 Bacteria 159252
83 Ga0453684_0000558 3300044712 Bacteria 140560
84 Ga0453684_0001273 3300044712 Bacteria 75558
85 Ga0453684_0003203 3300044712 Bacteria 37513
86 Ga0453684_0003752 3300044712 Bacteria 33592
87 Ga0453684_0004470 3300044712 Bacteria 29452
88 Ga0453684_0005857 3300044712 Bacteria 23891
89 Ga0453684_0012603 3300044712 Bacteria 13907
90 Ga0453684_0020710 3300044712 Bacteria 9896
91 Ga0453684_0037265 3300044712 Bacteria 6676
92 Ga0453684_0047225 3300044712 Bacteria 5713
93 Ga0453684_0053202 3300044712 Bacteria 5286
94 Ga0453684_0082710 3300044712 Bacteria 3998
95 Ga0453684_0083537 3300044712 Bacteria 3974
96 Ga0453684_0137046 3300044712 Bacteria 2928
97 Ga0453684_0170029 3300044712 Bacteria 2570
98 Ga0453684_0315250 3300044712 Bacteria 1773
99 Ga0451576_0000061 3300045051 Bacteria 284306
100 Ga0451576_0000605 3300045051 Bacteria 75644
101 Ga0451576_0003535 3300045051 Bacteria 21319
102 Ga0451576_0012438 3300045051 Bacteria 9559
103 Ga0451576_0027463 3300045051 Bacteria 6112
104 Ga0451576_0032071 3300045051 Bacteria 5599
105 Ga0451576_0057852 3300045051 Bacteria 4052
106 Ga0451576_0072297 3300045051 Bacteria 3590
107 Ga0451576_0139993 3300045051 Bacteria 2523
108 Ga0495590_0050214 3300046457 Bacteria 1455
109 Ga0496116_0001524 3300048919 Bacteria 25741
110 Ga0496117_0001128 3300048920 Bacteria 40283
111 Ga0496118_0029980 3300048921 Bacteria 4553
112 Ga0496122_0145249 3300048925 Bacteria 1475
113 Ga0496123_0126481 3300048926 Bacteria 1425
114 Ga0496124_0125940 3300048927 Bacteria 2041
115 Ga0496125_0172122 3300048928 Bacteria 1454
116 Ga0501300_001390 3300049523 Unclassified 3630
117 Ga0501034_0009817 3300049571 Bacteria 10008
118 Ga0501206_018930 3300049653 Bacteria 973
119 Ga0501238_009573 3300049671 Unclassified 1286
120 Ga0501242_003326 3300049674 Bacteria 1735
121 Ga0501247_007529 3300049677 Unclassified 1253
122 nmdc:mga06r32_563419_c1 3300050510 Unclassified 1112
123 nmdc:mga08y16_39306_c1 3300050511 Bacteria 4964
124 Ga0500604_0013130 3300053151 Bacteria 2242
125 Ga0500616_0008963 3300053153 Bacteria 6132
126 Ga0500622_0000115 3300053156 Bacteria 83078
127 Ga0500622_0001018 3300053156 Bacteria 23542
128 Ga0500622_0039764 3300053156 Bacteria 2451

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028794 Ga0307515_10000001 Ga0307515_10000001114 222
2 iso_pu_bacteria 2896317667 2896318430 223
3 3300003323 rootH1_10265789 rootH1_102657892 224
4 3300028800 Ga0265338_10007257 Ga0265338_100072577 224
5 3300042876 Ga0451577_0217324 Ga0451577_0217324_837_1514 224
6 3300044673 Ga0453683_0056867 Ga0453683_0056867_1755_2432 224
7 3300044712 Ga0453684_0315250 Ga0453684_0315250_552_1229 224
8 3300045051 Ga0451576_0139993 Ga0451576_0139993_1830_2507 224
9 iso_pu_bacteria 2721755487 2722728303 224
10 iso_pu_bacteria 2919177583 2919182414 224
11 3300005834 Ga0068851_10000066 Ga0068851_1000006614 225
12 3300025321 Ga0207656_10000099 Ga0207656_100000999 225
13 3300039062 Ga0400483_179170 Ga0400483_179170_68_748 225
14 3300049571 Ga0501034_0009817 Ga0501034_0009817_3681_4367 225
15 iso_pu_bacteria 2739367866 2740033157 225
16 3300005289 Ga0065704_10117846 Ga0065704_101178462 226
17 3300005544 Ga0070686_100021917 Ga0070686_1000219173 226
18 3300028653 Ga0265323_10002141 Ga0265323_100021418 226
19 3300028794 Ga0307515_10000016 Ga0307515_10000016226 226
20 3300031344 Ga0265316_10025005 Ga0265316_100250054 226
21 3300042876 Ga0451577_0000015 Ga0451577_0000015_102861_103544 226
22 3300042876 Ga0451577_0559572 Ga0451577_0559572_131_814 226
23 3300044673 Ga0453683_0029376 Ga0453683_0029376_2501_3265 226
24 3300044673 Ga0453683_0213397 Ga0453683_0213397_170_853 226
25 3300044712 Ga0453684_0000474 Ga0453684_0000474_55709_56392 226
26 3300044712 Ga0453684_0004470 Ga0453684_0004470_2865_3548 226
27 3300044712 Ga0453684_0005857 Ga0453684_0005857_22172_22855 226
28 3300044712 Ga0453684_0012603 Ga0453684_0012603_123_806 226
29 3300044712 Ga0453684_0053202 Ga0453684_0053202_1037_1720 226
30 3300045051 Ga0451576_0000061 Ga0451576_0000061_102861_103544 226
31 3300045051 Ga0451576_0003535 Ga0451576_0003535_11922_12605 226
32 3300045051 Ga0451576_0012438 Ga0451576_0012438_2599_3282 226
33 3300045051 Ga0451576_0027463 Ga0451576_0027463_4951_5634 226
34 3300045051 Ga0451576_0057852 Ga0451576_0057852_2355_3038 226
35 3300048919 Ga0496116_0001524 Ga0496116_0001524_5607_6296 226
36 3300048920 Ga0496117_0001128 Ga0496117_0001128_7954_8643 226
37 3300048921 Ga0496118_0029980 Ga0496118_0029980_3175_3864 226
38 3300048925 Ga0496122_0145249 Ga0496122_0145249_451_1140 226
39 3300048926 Ga0496123_0126481 Ga0496123_0126481_231_920 226
40 3300048927 Ga0496124_0125940 Ga0496124_0125940_563_1252 226
41 3300048928 Ga0496125_0172122 Ga0496125_0172122_269_958 226
42 iso_pu_bacteria 2839989709 2839991277 226
43 3300003316 rootH1_10000209 rootH1_100002098 227
44 3300003322 rootL2_10021873 rootL2_1002187310 227
45 3300003323 rootH1_10001636 rootH1_1000163664 227
46 3300003323 rootH1_10010912 rootH1_100109122 227
47 3300003323 rootH1_10010913 rootH1_100109132 227
48 3300005577 Ga0068857_100243411 Ga0068857_1002434112 227
49 3300005618 Ga0068864_100223527 Ga0068864_1002235272 227
50 3300026078 Ga0207702_10489450 Ga0207702_104894502 227
51 3300026095 Ga0207676_10162375 Ga0207676_101623752 227
52 3300031344 Ga0265316_10002758 Ga0265316_1000275816 227
53 3300031507 Ga0307509_10072800 Ga0307509_100728002 227
54 3300031727 Ga0316576_10194723 Ga0316576_101947232 227
55 3300031727 Ga0316576_10214188 Ga0316576_102141881 227
56 3300031728 Ga0316578_10020517 Ga0316578_100205173 227
57 3300031733 Ga0316577_10011850 Ga0316577_100118502 227
58 3300032137 Ga0316585_10001197 Ga0316585_100011978 227
59 3300032137 Ga0316585_10013810 Ga0316585_100138102 227
60 3300036712 Ga0316584_0007511 Ga0316584_0007511_1204_1890 227
61 3300039062 Ga0400483_154929 Ga0400483_154929_102_788 227
62 3300042876 Ga0451577_0005775 Ga0451577_0005775_7630_8319 227
63 3300042876 Ga0451577_0013448 Ga0451577_0013448_1026_1712 227
64 3300042876 Ga0451577_0043147 Ga0451577_0043147_1240_1929 227
65 3300042876 Ga0451577_0112574 Ga0451577_0112574_165_851 227
66 3300042876 Ga0451577_0135662 Ga0451577_0135662_204_890 227
67 3300042876 Ga0451577_0176167 Ga0451577_0176167_1068_1757 227
68 3300044673 Ga0453683_0032209 Ga0453683_0032209_1142_1828 227
69 3300044712 Ga0453684_0000558 Ga0453684_0000558_81366_82055 227
70 3300044712 Ga0453684_0001273 Ga0453684_0001273_62931_63620 227
71 3300044712 Ga0453684_0003752 Ga0453684_0003752_4759_5445 227
72 3300044712 Ga0453684_0020710 Ga0453684_0020710_326_1087 227
73 3300044712 Ga0453684_0047225 Ga0453684_0047225_1626_2315 227
74 3300044712 Ga0453684_0082710 Ga0453684_0082710_2244_2933 227
75 3300044712 Ga0453684_0137046 Ga0453684_0137046_326_1087 227
76 3300045051 Ga0451576_0000605 Ga0451576_0000605_11958_12647 227
77 3300045051 Ga0451576_0032071 Ga0451576_0032071_136_822 227
78 3300045051 Ga0451576_0072297 Ga0451576_0072297_2343_3029 227
79 3300003316 rootH1_10000132 rootH1_1000013216 228
80 3300003320 rootH2_10029927 rootH2_1002992713 228
81 3300003320 rootH2_10264288 rootH2_102642882 228
82 3300003322 rootL2_10002427 rootL2_1000242712 228
83 3300003323 rootH1_10001325 rootH1_1000132529 228
84 3300003323 rootH1_10010281 rootH1_1001028111 228
85 3300003323 rootH1_10072441 rootH1_100724412 228
86 3300003323 rootH1_10222955 rootH1_102229552 228
87 3300003323 rootH1_10269451 rootH1_102694512 228
88 3300003791 Ga0055530_10027722 Ga0055530_100277223 228
89 3300005262 Ga0065165_1000724 Ga0065165_10007247 228
90 3300006844 Ga0075428_100082632 Ga0075428_1000826321 228
91 3300006847 Ga0075431_100393917 Ga0075431_1003939172 228
92 3300009094 Ga0111539_10050160 Ga0111539_100501602 228
93 3300013104 Ga0157370_10357848 Ga0157370_103578482 228
94 3300025298 Ga0209050_1000879 Ga0209050_10008799 228
95 3300028666 Ga0265336_10054294 Ga0265336_100542942 228
96 3300044673 Ga0453683_0113331 Ga0453683_0113331_736_1431 228
97 3300044706 Ga0466964_0140105 Ga0466964_0140105_140_829 228
98 3300050510 nmdc:mga06r32_563419_c1 nmdc:mga06r32_563419_c1_146_835 228
99 3300050511 nmdc:mga08y16_39306_c1 nmdc:mga08y16_39306_c1_3433_4122 228
100 3300053153 Ga0500616_0008963 Ga0500616_0008963_4458_5264 228
101 3300053156 Ga0500622_0039764 Ga0500622_0039764_110_802 228
102 iso_pu_bacteria 2910245624 2910247725 228
103 3300003320 rootH2_10306159 rootH2_103061592 229
104 3300003322 rootL2_10217985 rootL2_102179852 229
105 3300003323 rootH1_10366746 rootH1_103667463 229
106 3300003794 Ga0055531_10000087 Ga0055531_1000008723 229
107 3300005289 Ga0065704_10000423 Ga0065704_100004233 229
108 3300005289 Ga0065704_10107482 Ga0065704_101074822 229
109 3300005293 Ga0065715_10128614 Ga0065715_101286141 229
110 3300009148 Ga0105243_10000007 Ga0105243_10000007117 229
111 3300014326 Ga0157380_10453799 Ga0157380_104537991 229
112 3300025304 Ga0209257_1000006 Ga0209257_1000006348 229
113 3300025935 Ga0207709_10000033 Ga0207709_10000033217 229
114 3300039093 Ga0400489_90346 Ga0400489_90346_112_804 229
115 3300042876 Ga0451577_0339636 Ga0451577_0339636_500_1195 229
116 3300042876 Ga0451577_0428899 Ga0451577_0428899_172_867 229
117 3300044712 Ga0453684_0003203 Ga0453684_0003203_8146_8844 229
118 3300044712 Ga0453684_0037265 Ga0453684_0037265_2102_2797 229
119 3300044712 Ga0453684_0083537 Ga0453684_0083537_18_713 229
120 3300044712 Ga0453684_0170029 Ga0453684_0170029_271_1029 229
121 3300049523 Ga0501300_001390 Ga0501300_001390_729_1421 229
122 3300049653 Ga0501206_018930 Ga0501206_018930_240_932 229
123 3300049671 Ga0501238_009573 Ga0501238_009573_141_833 229
124 3300049674 Ga0501242_003326 Ga0501242_003326_307_999 229
125 3300049677 Ga0501247_007529 Ga0501247_007529_500_1192 229
126 3300053151 Ga0500604_0013130 Ga0500604_0013130_1250_1942 229
127 3300053156 Ga0500622_0000115 Ga0500622_0000115_77934_78626 229
128 3300053156 Ga0500622_0001018 Ga0500622_0001018_18391_19083 229
129 2162886007 SwRhRL2b_contig_3235243 SwRhRL2b_0586.00005890 230
130 3300013102 Ga0157371_10000271 Ga0157371_1000027127 230
131 3300013104 Ga0157370_10001753 Ga0157370_1000175311 230
132 3300013105 Ga0157369_10000815 Ga0157369_1000081532 230
133 3300046457 Ga0495590_0050214 Ga0495590_0050214_494_1186 230

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02146

SIR2

Sir2 family

48

216

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6rxl-assembly1.cif.gz_A crystal structure of cobb wt in complex with h4k16-crotonyl peptide 0.9223 1 230
6rxm-assembly1.cif.gz_A crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16-acetyl peptide 0.9188 1 230
6rxl-assembly1.cif.gz_A crystal structure of cobb wt in complex with h4k16-crotonyl peptide 0.9185 1 230
6rxr-assembly1.cif.gz_A crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16cr-2'oh-adpr peptide intermediate after co-crystallisation 0.9154 1 230
6rxm-assembly1.cif.gz_A crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16-acetyl peptide 0.9149 1 230
ID Description Score Start End Superfamily
af_P75960_40_271_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9039 1 225 3.40.50.1220
af_A4IAM7_70_238_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.8854 65 225 3.40.50.1220
af_P75960_40_271_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.8814 1 225 3.40.50.1220
1s5pA02 Alpha Beta;2-Layer Sandwich;SIR2/SIRT2 'Small Domain';SIR2/SIRT2 'Small Domain' 0.8784 18 148 3.30.1600.10
af_Q68FX9_35_302_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.8776 2 218 3.40.50.1220
ID Description Score Start End GO Terms
AF-A0A7C3GKM8-F1-model_v4 protein acetyllysine N-acetyltransferase (EC 2.3.1.286) 0.9931 2 172 GO:0017136
GO:0070403
AF-A0A7Y1YUH0-F1-model_v4 NAD-dependent deacylase 0.99 1 145 GO:0017136
GO:0070403
AF-I3Z793-F1-model_v4 protein acetyllysine N-acetyltransferase (EC 2.3.1.286) 0.9885 2 102 GO:0017136
GO:0070403
AF-A0A4Q6AZ94-F1-model_v4 protein acetyllysine N-acetyltransferase (EC 2.3.1.286) 0.9854 1 194 GO:0017136
GO:0036054
GO:0036055
GO:0070403
AF-A0A2X1WMF4-F1-model_v4 NAD-dependent protein deacylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog) 0.9853 2 229 GO:0005737
GO:0032041
GO:0036054
GO:0036055
GO:0046969
GO:0046970
GO:0070403
GO:0097372
GO:0140765
GO:0141222

Feature Viewer

pLDDT pTM Quality
91.59 0.9 High
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Predicted Structure (AlphaFold2)

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