F155579

General Info

Members Datasets Scaffolds Average Seq Length
133 73 266 485

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100031137|Ga0070679_1000311372
Length 534
Sequence VCRTRSREAESDGGLPTNPLRAVMARLHTLPLRMAYDWLKGVADEYDVIVIGSGLGGLTGANVLAKAGHRVLLLEHHYQFGGLATWFTRKGGHIFDISLHGFPVGMIKSCRKYWTKEIADSIVQLKDIRFVNPQMDVWTTFTREDYTRVLVETFGLDRAQVERFYDHLRGMNFYDANRETTGEMLERFFPGRADVKRLLMEPIAYANGSTLDDPAITYGIVFSNFMGSGVYTFRGGSDVLIEKMTDELRRNGVELRKKVLVERILVEEQGGRKVACGIVAKGGRVIRAKAVLSNANIKNTVLRLAGEENFPAEFVAEAKAVRINSSSCQVYLGIRKGETIPHIGDLVFTSANPSFDSGELTAFRTTSRTFSVYYPDTRPGSDRYTVVVSLNGQYGDWAALSEEEYGREKQRLIDESVTALEKFIPGVRAKIDWMEAATPRTIEYYTTHMAGTSFGTKFEGLKVSMELPEKLPGLFHAGSVGIIMSGWLGTINYGVIVANKIDKALFERKQASASRTSTAAATNESNAGSTSFPP

Samples

Sample ID Description Type Environment
1 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
11 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
12 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
13 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
19 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
20 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
21 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
22 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
23 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
24 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
25 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
26 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
27 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
28 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
29 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
30 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
31 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
32 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
33 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
34 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
35 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
36 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
37 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
38 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
39 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
40 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
41 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
42 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
43 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
44 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
45 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
46 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
47 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
48 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
49 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
50 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
51 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
52 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
53 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
55 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
60 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
67 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
68 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
69 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
72 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
73 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0
Isolates 0.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.75
Nodule 0
Rhizoplane 0
Rhizosphere 96.24
Stem 0
Stem Tuber 0
Unclassified 1.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070679_100031137 3300005530 Bacteria 5270
2 Ga0070658_10117074 3300005327 Bacteria 2212
3 Ga0068869_100034749 3300005334 Bacteria 3568
4 Ga0070713_100060248 3300005436 Bacteria 3173
5 Ga0068867_100000403 3300005459 Bacteria 29029
6 Ga0070706_100002972 3300005467 Bacteria 16809
7 Ga0070707_100001637 3300005468 Bacteria 21743
8 Ga0070698_100007156 3300005471 Bacteria 12085
9 Ga0068856_100003236 3300005614 Bacteria 16577
10 Ga0070717_10000235 3300006028 Bacteria 38379
11 Ga0097621_100002317 3300006237 Bacteria 13058
12 Ga0163163_10134747 3300014325 Bacteria 2511
13 Ga0207705_10110211 3300025909 Bacteria 2033
14 Ga0207684_10000622 3300025910 Bacteria 42205
15 Ga0207646_10003131 3300025922 Bacteria 18969
16 Ga0207689_10046982 3300025942 Bacteria 3566
17 Ga0207648_10001201 3300026089 Bacteria 29006
18 Ga0265337_1003916 3300028556 Bacteria 6304
19 Ga0265319_1000135 3300028563 Bacteria 54862
20 Ga0265319_1000378 3300028563 Bacteria 32213
21 Ga0265319_1003586 3300028563 Bacteria 8046
22 Ga0265319_1008207 3300028563 Bacteria 4603
23 Ga0265319_1009414 3300028563 Bacteria 4162
24 Ga0265319_1013628 3300028563 Bacteria 3221
25 Ga0265319_1015177 3300028563 Bacteria 2996
26 Ga0265334_10009384 3300028573 Bacteria 4139
27 Ga0265318_10000005 3300028577 Bacteria 303630
28 Ga0265318_10001563 3300028577 Bacteria 13304
29 Ga0265318_10001716 3300028577 Bacteria 12540
30 Ga0265318_10029228 3300028577 Bacteria 2150
31 Ga0265323_10000030 3300028653 Bacteria 78048
32 Ga0265322_10001574 3300028654 Bacteria 7319
33 Ga0265338_10000821 3300028800 Bacteria 52366
34 Ga0265338_10003907 3300028800 Bacteria 20579
35 Ga0265338_10016838 3300028800 Bacteria 7919
36 Ga0265338_10137967 3300028800 Bacteria 1914
37 Ga0265324_10003034 3300029957 Bacteria 8211
38 Ga0265320_10000299 3300031240 Bacteria 40425
39 Ga0265320_10000815 3300031240 Bacteria 23530
40 Ga0265320_10002750 3300031240 Bacteria 12146
41 Ga0265320_10002762 3300031240 Bacteria 12118
42 Ga0265320_10006463 3300031240 Bacteria 7387
43 Ga0265320_10007962 3300031240 Bacteria 6531
44 Ga0265320_10019417 3300031240 Bacteria 3716
45 Ga0265320_10019938 3300031240 Bacteria 3650
46 Ga0265320_10031682 3300031240 Bacteria 2714
47 Ga0265339_10075513 3300031249 Bacteria 1789
48 Ga0265331_10011865 3300031250 Bacteria 4752
49 Ga0265327_10000016 3300031251 Bacteria 467439
50 Ga0265327_10005525 3300031251 Bacteria 10510
51 Ga0265327_10008802 3300031251 Bacteria 7442
52 Ga0265327_10025856 3300031251 Bacteria 3412
53 Ga0265316_10001301 3300031344 Bacteria 26847
54 Ga0265316_10063913 3300031344 Bacteria 2852
55 Ga0265316_10131156 3300031344 Bacteria 1887
56 Ga0307408_100000017 3300031548 Bacteria 355890
57 Ga0265313_10000445 3300031595 Bacteria 43753
58 Ga0265313_10001712 3300031595 Bacteria 20198
59 Ga0265313_10001959 3300031595 Bacteria 18615
60 Ga0265313_10011113 3300031595 Bacteria 5615
61 Ga0265313_10013477 3300031595 Bacteria 4905
62 Ga0307508_10000160 3300031616 Bacteria 80743
63 Ga0265314_10002296 3300031711 Bacteria 19757
64 Ga0265314_10004240 3300031711 Bacteria 13442
65 Ga0265314_10004300 3300031711 Bacteria 13304
66 Ga0265314_10007237 3300031711 Bacteria 9646
67 Ga0265314_10010910 3300031711 Bacteria 7550
68 Ga0265342_10004960 3300031712 Bacteria 10281
69 Ga0265342_10034584 3300031712 Bacteria 3100
70 Ga0265342_10042128 3300031712 Bacteria 2760
71 Ga0265342_10074511 3300031712 Bacteria 1972
72 Ga0316576_10004550 3300031727 Bacteria 8336
73 Ga0307410_10000137 3300031852 Bacteria 26086
74 Ga0307407_10000544 3300031903 Bacteria 11770
75 Ga0307409_100004285 3300031995 Bacteria 7977
76 Ga0307416_100000034 3300032002 Bacteria 155632
77 Ga0316574_0044480 3300035398 Bacteria 2747
78 Ga0373927_0002742 3300035695 Bacteria 12842
79 Ga0373925_0000099 3300037068 Bacteria 93726
80 Ga0395905_0000010 3300037471 Bacteria 460729
81 Ga0400488_01477 3300038741 Unclassified 3215
82 Ga0400483_050884 3300039062 Unclassified 1890
83 Ga0451577_0000012 3300042876 Bacteria 575467
84 Ga0451577_0000164 3300042876 Bacteria 145507
85 Ga0451577_0011388 3300042876 Bacteria 8417
86 Ga0453683_0000582 3300044673 Bacteria 40455
87 Ga0453683_0028338 3300044673 Bacteria 3547
88 Ga0453684_0000001 3300044712 Bacteria 2623166
89 Ga0453684_0000978 3300044712 Bacteria 93610
90 Ga0453684_0005448 3300044712 Bacteria 25199
91 Ga0453684_0012749 3300044712 Bacteria 13803
92 Ga0453684_0122804 3300044712 Bacteria 3132
93 Ga0453684_0158506 3300044712 Bacteria 2680
94 Ga0466959_0075404 3300045049 Bacteria 2437
95 Ga0451576_0000087 3300045051 Bacteria 234554
96 Ga0451576_0002869 3300045051 Bacteria 24688
97 Ga0451576_0003103 3300045051 Bacteria 23306
98 Ga0451576_0065898 3300045051 Bacteria 3771
99 Ga0466967_0126280 3300045976 Bacteria 2370
100 Ga0501031_0014753 3300049568 Bacteria 5079
101 Ga0501032_0001103 3300049569 Bacteria 21588
102 Ga0501032_0001252 3300049569 Bacteria 20384
103 Ga0501033_0005393 3300049570 Bacteria 10133
104 Ga0501033_0035191 3300049570 Bacteria 3755
105 Ga0501034_0012712 3300049571 Bacteria 8682
106 Ga0501034_0090953 3300049571 Bacteria 3049
107 Ga0501036_0053706 3300049572 Bacteria 3411
108 Ga0501037_0002022 3300049573 Bacteria 14699
109 Ga0501038_0002667 3300049574 Bacteria 16662
110 Ga0501039_0002735 3300049575 Bacteria 13143
111 Ga0501042_0001454 3300049578 Bacteria 13949
112 Ga0501043_0002618 3300049579 Bacteria 15175
113 Ga0501046_0001756 3300049580 Bacteria 20709
114 Ga0501046_0006549 3300049580 Bacteria 10298
115 Ga0501046_0020119 3300049580 Bacteria 5525
116 Ga0501046_0023407 3300049580 Bacteria 5083
117 Ga0501047_0006410 3300049581 Bacteria 11069
118 Ga0501047_0010072 3300049581 Bacteria 8937
119 Ga0501047_0010308 3300049581 Bacteria 8838
120 Ga0501047_0015343 3300049581 Bacteria 7299
121 Ga0501047_0097052 3300049581 Bacteria 2825
122 Ga0501048_0001712 3300049582 Bacteria 16726
123 Ga0501243_000006 3300049675 Bacteria 22334
124 Ga0501080_0103373 3300049742 Bacteria 2642
125 Ga0501083_0004321 3300049744 Bacteria 10009
126 Ga0501035_0003820 3300049822 Bacteria 14355
127 Ga0501035_0004099 3300049822 Bacteria 13854
128 Ga0501035_0019321 3300049822 Bacteria 6270
129 Ga0501044_0000299 3300049823 Bacteria 62791
130 Ga0501044_0017701 3300049823 Bacteria 7643
131 Ga0501045_0130596 3300049824 Bacteria 1867
132 Ga0500568_0006414 3300053139 Bacteria 5904
133 2788436615 2786546940 Bacteria 6396474
134 Ga0070679_100031137
135 Ga0070658_10117074
136 Ga0068869_100034749
137 Ga0070713_100060248
138 Ga0068867_100000403
139 Ga0070706_100002972
140 Ga0070707_100001637
141 Ga0070698_100007156
142 Ga0068856_100003236
143 Ga0070717_10000235
144 Ga0097621_100002317
145 Ga0163163_10134747
146 Ga0207705_10110211
147 Ga0207684_10000622
148 Ga0207646_10003131
149 Ga0207689_10046982
150 Ga0207648_10001201
151 Ga0265337_1003916
152 Ga0265319_1000135
153 Ga0265319_1000378
154 Ga0265319_1003586
155 Ga0265319_1008207
156 Ga0265319_1009414
157 Ga0265319_1013628
158 Ga0265319_1015177
159 Ga0265334_10009384
160 Ga0265318_10000005
161 Ga0265318_10001563
162 Ga0265318_10001716
163 Ga0265318_10029228
164 Ga0265323_10000030
165 Ga0265322_10001574
166 Ga0265338_10000821
167 Ga0265338_10003907
168 Ga0265338_10016838
169 Ga0265338_10137967
170 Ga0265324_10003034
171 Ga0265320_10000299
172 Ga0265320_10000815
173 Ga0265320_10002750
174 Ga0265320_10002762
175 Ga0265320_10006463
176 Ga0265320_10007962
177 Ga0265320_10019417
178 Ga0265320_10019938
179 Ga0265320_10031682
180 Ga0265339_10075513
181 Ga0265331_10011865
182 Ga0265327_10000016
183 Ga0265327_10005525
184 Ga0265327_10008802
185 Ga0265327_10025856
186 Ga0265316_10001301
187 Ga0265316_10063913
188 Ga0265316_10131156
189 Ga0307408_100000017
190 Ga0265313_10000445
191 Ga0265313_10001712
192 Ga0265313_10001959
193 Ga0265313_10011113
194 Ga0265313_10013477
195 Ga0307508_10000160
196 Ga0265314_10002296
197 Ga0265314_10004240
198 Ga0265314_10004300
199 Ga0265314_10007237
200 Ga0265314_10010910
201 Ga0265342_10004960
202 Ga0265342_10034584
203 Ga0265342_10042128
204 Ga0265342_10074511
205 Ga0316576_10004550
206 Ga0307410_10000137
207 Ga0307407_10000544
208 Ga0307409_100004285
209 Ga0307416_100000034
210 Ga0316574_0044480
211 Ga0373927_0002742
212 Ga0373925_0000099
213 Ga0395905_0000010
214 Ga0400488_01477
215 Ga0400483_050884
216 Ga0451577_0000012
217 Ga0451577_0000164
218 Ga0451577_0011388
219 Ga0453683_0000582
220 Ga0453683_0028338
221 Ga0453684_0000001
222 Ga0453684_0000978
223 Ga0453684_0005448
224 Ga0453684_0012749
225 Ga0453684_0122804
226 Ga0453684_0158506
227 Ga0466959_0075404
228 Ga0451576_0000087
229 Ga0451576_0002869
230 Ga0451576_0003103
231 Ga0451576_0065898
232 Ga0466967_0126280
233 Ga0501031_0014753
234 Ga0501032_0001103
235 Ga0501032_0001252
236 Ga0501033_0005393
237 Ga0501033_0035191
238 Ga0501034_0012712
239 Ga0501034_0090953
240 Ga0501036_0053706
241 Ga0501037_0002022
242 Ga0501038_0002667
243 Ga0501039_0002735
244 Ga0501042_0001454
245 Ga0501043_0002618
246 Ga0501046_0001756
247 Ga0501046_0006549
248 Ga0501046_0020119
249 Ga0501046_0023407
250 Ga0501047_0006410
251 Ga0501047_0010072
252 Ga0501047_0010308
253 Ga0501047_0015343
254 Ga0501047_0097052
255 Ga0501048_0001712
256 Ga0501243_000006
257 Ga0501080_0103373
258 Ga0501083_0004321
259 Ga0501035_0003820
260 Ga0501035_0004099
261 Ga0501035_0019321
262 Ga0501044_0000299
263 Ga0501044_0017701
264 Ga0501045_0130596
265 Ga0500568_0006414
266 2788436615

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01494

FAD_binding_3

FAD binding domain

45

83

0.94

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

50

113

0.94

PF00890

FAD_binding_2

FAD binding domain

47

120

0.9

PF01946

Thi4

Thi4 family

32

99

0.81

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

55

480

0.74

PF12831

FAD_oxidored

FAD dependent oxidoreductase

47

169

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zn0-assembly2.cif.gz_D structure of the nadph-dependent thioredoxin reductase from methanosarcina mazei 0.9707 13 42
4oqy-assembly1.cif.gz_B streptomyces sp. gf3546 imine reductase 0.9557 14 41
4oqy-assembly1.cif.gz_A streptomyces sp. gf3546 imine reductase 0.9537 14 41
7bke-assembly1.cif.gz_a formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (heterodisulfide reductase core and mobile arm in conformational state 2, composite structure) 0.9528 14 49
6smt-assembly1.cif.gz_B s-enantioselective imine reductase from mycobacterium smegmatis 0.9527 14 40
ID Description Score Start End Superfamily
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.997 15 42 3.50.50.60
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9809 15 50 3.50.50.60
1mfzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.973 15 43 3.40.50.720
6hrdB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9694 14 43 3.40.50.720
af_P76440_125_245_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9672 14 49 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A1G1CFR2-F1-model_v4 Phytoene dehydrogenase 0.982 9 470 GO:0016491
AF-A0A517ZV72-F1-model_v4 Amine oxidase domain-containing protein 0.9806 1 470 GO:0016491
AF-A0A1H0PX17-F1-model_v4 Phytoene dehydrogenase-related protein 0.9803 8 470 GO:0016491
AF-A0A1J5ELL6-F1-model_v4 Phytoene dehydrogenase 0.9803 6 470
AF-F0SJW4-F1-model_v4 Fumarate reductase/succinate dehydrogenase flavoprotein domain protein 0.9801 1 478 GO:0016491

Map