F153102

General Info

Members Datasets Scaffolds Average Seq Length
132 82 121 484

Family's Representative Sequence

Representative Sequence 3300026089|Ga0207648_10119380|Ga0207648_101193802
Length 520
Sequence MKKIMLLLFLLLNITLRSFSQTETVPSFIKDSLDTYVNRALTEWKIPGVSVCVVKNGKVVVMKGYGVRELNSPDKVSQLLGTAYPAGSYVAFAESLSDNVSDKGVGGTDKTIEDPYFFRDVTDDQQDSPEWYWAACYSAVAAANQALEACKNASDPASYSSQQGEALLSRAYAHFMLVTFFSKIYDPATAATDEGIPYVTEPEKIVFKNYERKTVAYVYDMIEKDLIEGLPLLDDKRYSVPKYHFTKAAANAFAARFYLFKRDYAKVVDYANQVFSSGNITALLRPWNTTYLTYTPAEMFSIYAKATEPANLLLAETSSLWGRNYFTNRYGFTSSKRDEILEANVTGGDWAFRNQLYTAGTENYLIPKINEYFVRSSVNATIGIPYVMVPLFTAEEVLFNRAEANDWLGNTTSALADLNTYASTRIVNYSPSTHAITASKINSFYGTTNLQAGILLTILDFKRAEFVQEGMRWFDILRYGIPVTHYTSAGEIFQLTATDLRRVLQIPASAKLAGIDQNPR

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2738541283 Pedobacter sp. OK701 Isolate Unclassified
3 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
4 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
5 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
6 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
7 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
8 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
31 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
32 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
33 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
34 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
35 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
38 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
40 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
49 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
50 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
51 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
52 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
53 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
54 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
55 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
56 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
57 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
58 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
59 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
60 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
61 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
62 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
63 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
64 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
65 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
66 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
67 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
68 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
69 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
72 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
73 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
74 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
75 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
76 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
77 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
78 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
79 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
80 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
81 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
82 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.67
Metatranscriptomes 0
Isolates 8.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25
Nodule 0
Rhizoplane 0
Rhizosphere 51.52
Stem 0
Stem Tuber 0
Unclassified 23.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10000561 3300001989 Bacteria 13365
2 JGI24739J22299_10004520 3300001989 Bacteria 5320
3 JGI25154J39366_1000005 3300002738 Bacteria 345115
4 rootH2_10155869 3300003320 Bacteria 4270
5 rootL2_10055869 3300003322 Bacteria 3635
6 rootL2_10058844 3300003322 Bacteria 4284
7 rootL2_10058845 3300003322 Bacteria 2945
8 rootH1_10000662 3300003323 Bacteria 213765
9 rootH1_10010378 3300003323 Bacteria 33865
10 rootH1_10021824 3300003323 Unclassified 4024
11 JGI25160J50197_1012040 3300003354 Unclassified 3030
12 Ga0055526_1018549 3300003771 Bacteria 2591
13 Ga0055528_1000239 3300003790 Bacteria 46037
14 Ga0055530_10001812 3300003791 Bacteria 14798
15 Ga0065165_1000657 3300005262 Bacteria 49860
16 Ga0068869_100141837 3300005334 Bacteria 1856
17 Ga0070675_100127871 3300005354 Bacteria 2163
18 Ga0070698_100051002 3300005471 Bacteria 4216
19 Ga0068856_100004133 3300005614 Bacteria 14504
20 Ga0068856_100022385 3300005614 Bacteria 6143
21 Ga0075366_10017483 3300006195 Bacteria 4127
22 Ga0097621_100048165 3300006237 Bacteria 3456
23 Ga0114129_10010212 3300009147 Bacteria 13386
24 Ga0114129_10014200 3300009147 Bacteria 11348
25 Ga0114129_10032770 3300009147 Bacteria 7342
26 Ga0105241_10019516 3300009174 Bacteria 4999
27 Ga0105241_10059917 3300009174 Bacteria 2928
28 Ga0105237_10000374 3300009545 Bacteria 63655
29 Ga0105249_10075782 3300009553 Unclassified 3116
30 Ga0105239_10001450 3300010375 Bacteria 31601
31 Ga0105239_10001680 3300010375 Bacteria 29168
32 Ga0105239_10005014 3300010375 Bacteria 15634
33 Ga0157373_10158012 3300013100 Bacteria 1595
34 Ga0157370_10001374 3300013104 Bacteria 30122
35 Ga0182008_10000151 3300014497 Bacteria 54331
36 Ga0182006_1000769 3300015261 Bacteria 21837
37 Ga0163161_10108171 3300017792 Bacteria 2076
38 Ga0209646_1000003 3300025246 Bacteria 1160860
39 Ga0209646_1000017 3300025246 Bacteria 488265
40 Ga0209646_1002283 3300025246 Bacteria 4378
41 Ga0209646_1003148 3300025246 Bacteria 3335
42 Ga0209026_1000182 3300025250 Bacteria 92580
43 Ga0209026_1000314 3300025250 Bacteria 51962
44 Ga0209673_1000263 3300025273 Bacteria 99337
45 Ga0209564_1004430 3300025295 Bacteria 8601
46 Ga0209564_1011213 3300025295 Bacteria 4040
47 Ga0209758_1003312 3300025297 Bacteria 14872
48 Ga0209758_1020492 3300025297 Bacteria 3125
49 Ga0209050_1000323 3300025298 Bacteria 96020
50 Ga0207426_1000363 3300025302 Bacteria 81330
51 Ga0209051_1017857 3300025303 Bacteria 3158
52 Ga0207654_10020837 3300025911 Bacteria 3481
53 Ga0207671_10001416 3300025914 Bacteria 27847
54 Ga0207689_10006379 3300025942 Bacteria 10442
55 Ga0207667_10033219 3300025949 Bacteria 5551
56 Ga0207702_10024102 3300026078 Bacteria 5049
57 Ga0207702_10071405 3300026078 Bacteria 2990
58 Ga0207648_10119380 3300026089 Bacteria 2318
59 Ga0207674_10003831 3300026116 Bacteria 18337
60 Ga0207674_10052037 3300026116 Bacteria 4177
61 Ga0307513_10095836 3300031456 Bacteria 3007
62 Ga0307509_10015282 3300031507 Bacteria 8970
63 Ga0307508_10002685 3300031616 Bacteria 18623
64 Ga0307414_10006766 3300032004 Bacteria 6412
65 Ga0439436_0003743 3300041404 Bacteria 4642
66 Ga0451853_1622626 3300041512 Bacteria 4949
67 Ga0439431_0000434 3300041997 Bacteria 8887
68 Ga0439457_000270 3300042014 Bacteria 14291
69 Ga0439462_0014416 3300042015 Bacteria 2031
70 Ga0466969_0000149 3300044656 Bacteria 37747
71 Ga0466969_0001477 3300044656 Bacteria 12638
72 Ga0466972_0000013 3300044658 Bacteria 229345
73 Ga0466972_0000040 3300044658 Bacteria 133427
74 Ga0466972_0000101 3300044658 Bacteria 75550
75 Ga0466972_0009554 3300044658 Bacteria 4871
76 Ga0466972_0010157 3300044658 Bacteria 4729
77 Ga0466965_0021354 3300044683 Bacteria 3116
78 Ga0466966_0000045 3300044684 Bacteria 92504
79 Ga0466966_0040963 3300044684 Bacteria 2978
80 Ga0466961_0076886 3300044693 Unclassified 2115
81 Ga0466971_0048031 3300044719 Unclassified 1919
82 Ga0466957_0000156 3300044842 Bacteria 29671
83 Ga0466957_0000725 3300044842 Bacteria 16890
84 Ga0466959_0000023 3300045049 Bacteria 124545
85 Ga0466959_0000399 3300045049 Bacteria 25506
86 Ga0495606_0013160 3300046507 Bacteria 6566
87 Ga0496122_0000555 3300048925 Bacteria 76648
88 Ga0496123_0008418 3300048926 Bacteria 9479
89 Ga0496125_0044441 3300048928 Bacteria 3757
90 Ga0501034_0182630 3300049571 Bacteria 2062
91 Ga0501047_0024238 3300049581 Bacteria 5825
92 Ga0501047_0034850 3300049581 Bacteria 4860
93 Ga0501047_0088900 3300049581 Bacteria 2966
94 Ga0501047_0091975 3300049581 Bacteria 2912
95 Ga0501225_0000182 3300049705 Bacteria 19491
96 Ga0501225_0010550 3300049705 Bacteria 2616
97 Ga0501241_000277 3300049758 Bacteria 11333
98 Ga0501044_0063221 3300049823 Bacteria 3782
99 Ga0501044_0107308 3300049823 Bacteria 2804
100 nmdc:mga0k408_13965_c1 3300050493 Bacteria 4413
101 nmdc:mga0k408_16549_c1 3300050493 Bacteria 4092
102 nmdc:mga0k408_53257_c1 3300050493 Bacteria 2345
103 nmdc:mga05p37_1502_c2 3300050507 Bacteria 17494
104 nmdc:mga05p37_24825_c1 3300050507 Bacteria 7287
105 nmdc:mga05p37_6859_c1 3300050507 Bacteria 13426
106 Ga0500578_0000018 3300053086 Bacteria 172537
107 Ga0500578_0000054 3300053086 Bacteria 121082
108 Ga0500578_0000155 3300053086 Bacteria 80380
109 Ga0500578_0025899 3300053086 Bacteria 3763
110 Ga0500578_0055711 3300053086 Bacteria 2530
111 Ga0500578_0106565 3300053086 Bacteria 1770
112 Ga0500646_0024706 3300053090 Bacteria 1619
113 Ga0500583_0000005 3300053092 Bacteria 166480
114 Ga0500583_0000043 3300053092 Bacteria 81313
115 Ga0500583_0000125 3300053092 Bacteria 35448
116 Ga0500583_0002977 3300053092 Bacteria 5223
117 Ga0500583_0004322 3300053092 Bacteria 4616
118 Ga0500652_005610 3300053131 Bacteria 3971
119 Ga0500652_056060 3300053131 Bacteria 1616
120 Ga0500604_0000943 3300053151 Bacteria 8050
121 Ga0500636_0031003 3300053177 Bacteria 3165

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044693 Ga0466961_0076886 Ga0466961_0076886_38_1360 431
2 3300053131 Ga0500652_056060 Ga0500652_056060_291_1589 431
3 3300053086 Ga0500578_0000054 Ga0500578_0000054_73412_74770 450
4 3300006195 Ga0075366_10017483 Ga0075366_100174833 471
5 3300050493 nmdc:mga0k408_16549_c1 nmdc:mga0k408_16549_c1_1879_3297 471
6 3300053086 Ga0500578_0000018 Ga0500578_0000018_39528_40979 471
7 3300041512 Ga0451853_1622626 Ga0451853_1622626_2307_3725 472
8 3300003322 rootL2_10058845 rootL2_100588452 473
9 3300049705 Ga0501225_0010550 Ga0501225_0010550_1152_2603 473
10 iso_pu_bacteria 2738541283 2738756744 476
11 3300049823 Ga0501044_0107308 Ga0501044_0107308_776_2212 477
12 iso_pu_bacteria 2738541278 2738726960 477
13 3300032004 Ga0307414_10006766 Ga0307414_100067662 478
14 iso_pu_bacteria 2929921140 2929927028 478
15 iso_pu_bacteria 8003151029 8003155087 478
16 3300009545 Ga0105237_10000374 Ga0105237_100003743 479
17 3300013104 Ga0157370_10001374 Ga0157370_1000137413 479
18 3300014497 Ga0182008_10000151 Ga0182008_1000015126 479
19 3300015261 Ga0182006_1000769 Ga0182006_10007692 479
20 3300017792 Ga0163161_10108171 Ga0163161_101081712 479
21 3300025914 Ga0207671_10001416 Ga0207671_1000141624 479
22 3300048925 Ga0496122_0000555 Ga0496122_0000555_52839_54314 479
23 3300048926 Ga0496123_0008418 Ga0496123_0008418_5239_6714 479
24 3300048928 Ga0496125_0044441 Ga0496125_0044441_1193_2668 479
25 3300049758 Ga0501241_000277 Ga0501241_000277_8834_10312 479
26 iso_pu_bacteria 2738541278 2738726318 479
27 iso_pu_bacteria 2738541278 2738729587 479
28 iso_pu_bacteria 2840677318 2840679414 479
29 iso_pu_bacteria 2896085136 2896087225 479
30 iso_pu_bacteria 2896109856 2896113844 479
31 iso_pu_bacteria 2929921140 2929925489 479
32 iso_pu_bacteria 8003151029 8003155914 479
33 3300026089 Ga0207648_10119380 Ga0207648_101193802 480
34 3300046507 Ga0495606_0013160 Ga0495606_0013160_2015_3469 480
35 3300005354 Ga0070675_100127871 Ga0070675_1001278712 481
36 3300025246 Ga0209646_1003148 Ga0209646_10031482 481
37 3300044658 Ga0466972_0000040 Ga0466972_0000040_16843_18294 481
38 3300049705 Ga0501225_0000182 Ga0501225_0000182_2249_3700 481
39 3300053092 Ga0500583_0004322 Ga0500583_0004322_192_1640 481
40 3300001989 JGI24739J22299_10004520 JGI24739J22299_100045202 482
41 3300003320 rootH2_10155869 rootH2_101558693 482
42 3300025246 Ga0209646_1000003 Ga0209646_1000003676 482
43 3300025250 Ga0209026_1000182 Ga0209026_100018233 482
44 3300025297 Ga0209758_1020492 Ga0209758_10204922 482
45 3300031456 Ga0307513_10095836 Ga0307513_100958361 482
46 3300044658 Ga0466972_0000101 Ga0466972_0000101_33502_34950 482
47 3300044658 Ga0466972_0009554 Ga0466972_0009554_2249_3697 482
48 3300044658 Ga0466972_0010157 Ga0466972_0010157_3216_4679 482
49 3300049581 Ga0501047_0034850 Ga0501047_0034850_2236_3687 482
50 3300053086 Ga0500578_0055711 Ga0500578_0055711_342_1793 482
51 3300002738 JGI25154J39366_1000005 JGI25154J39366_1000005249 483
52 3300003322 rootL2_10055869 rootL2_100558692 483
53 3300003322 rootL2_10058844 rootL2_100588442 483
54 3300003323 rootH1_10000662 rootH1_1000066238 483
55 3300003323 rootH1_10010378 rootH1_100103784 483
56 3300003323 rootH1_10021824 rootH1_100218242 483
57 3300003354 JGI25160J50197_1012040 JGI25160J50197_10120401 483
58 3300005334 Ga0068869_100141837 Ga0068869_1001418372 483
59 3300005471 Ga0070698_100051002 Ga0070698_1000510022 483
60 3300005614 Ga0068856_100004133 Ga0068856_1000041332 483
61 3300005614 Ga0068856_100022385 Ga0068856_1000223854 483
62 3300006237 Ga0097621_100048165 Ga0097621_1000481652 483
63 3300009147 Ga0114129_10010212 Ga0114129_100102127 483
64 3300009147 Ga0114129_10014200 Ga0114129_100142003 483
65 3300009147 Ga0114129_10032770 Ga0114129_100327704 483
66 3300009174 Ga0105241_10019516 Ga0105241_100195163 483
67 3300009174 Ga0105241_10059917 Ga0105241_100599172 483
68 3300009553 Ga0105249_10075782 Ga0105249_100757822 483
69 3300010375 Ga0105239_10001450 Ga0105239_100014508 483
70 3300010375 Ga0105239_10001680 Ga0105239_100016809 483
71 3300010375 Ga0105239_10005014 Ga0105239_100050148 483
72 3300025246 Ga0209646_1000017 Ga0209646_1000017155 483
73 3300025246 Ga0209646_1002283 Ga0209646_10022832 483
74 3300025250 Ga0209026_1000314 Ga0209026_10003148 483
75 3300025302 Ga0207426_1000363 Ga0207426_100036352 483
76 3300025911 Ga0207654_10020837 Ga0207654_100208373 483
77 3300025942 Ga0207689_10006379 Ga0207689_100063796 483
78 3300025949 Ga0207667_10033219 Ga0207667_100332192 483
79 3300026078 Ga0207702_10024102 Ga0207702_100241022 483
80 3300026078 Ga0207702_10071405 Ga0207702_100714053 483
81 3300026116 Ga0207674_10003831 Ga0207674_100038316 483
82 3300026116 Ga0207674_10052037 Ga0207674_100520372 483
83 3300031507 Ga0307509_10015282 Ga0307509_100152822 483
84 3300041404 Ga0439436_0003743 Ga0439436_0003743_1650_3119 483
85 3300041997 Ga0439431_0000434 Ga0439431_0000434_7367_8824 483
86 3300042014 Ga0439457_000270 Ga0439457_000270_11922_13391 483
87 3300042015 Ga0439462_0014416 Ga0439462_0014416_414_1868 483
88 3300044656 Ga0466969_0000149 Ga0466969_0000149_10497_11963 483
89 3300044656 Ga0466969_0001477 Ga0466969_0001477_8996_10453 483
90 3300044658 Ga0466972_0000013 Ga0466972_0000013_134059_135522 483
91 3300044684 Ga0466966_0000045 Ga0466966_0000045_21222_22688 483
92 3300044684 Ga0466966_0040963 Ga0466966_0040963_1298_2755 483
93 3300044719 Ga0466971_0048031 Ga0466971_0048031_296_1771 483
94 3300044842 Ga0466957_0000156 Ga0466957_0000156_3322_4773 483
95 3300044842 Ga0466957_0000725 Ga0466957_0000725_8734_10200 483
96 3300045049 Ga0466959_0000023 Ga0466959_0000023_27355_28821 483
97 3300045049 Ga0466959_0000399 Ga0466959_0000399_20985_22442 483
98 3300049581 Ga0501047_0024238 Ga0501047_0024238_75_1532 483
99 3300049581 Ga0501047_0088900 Ga0501047_0088900_1112_2563 483
100 3300050493 nmdc:mga0k408_13965_c1 nmdc:mga0k408_13965_c1_1034_2488 483
101 3300050493 nmdc:mga0k408_53257_c1 nmdc:mga0k408_53257_c1_124_1578 483
102 3300050507 nmdc:mga05p37_1502_c2 nmdc:mga05p37_1502_c2_7994_9451 483
103 3300050507 nmdc:mga05p37_24825_c1 nmdc:mga05p37_24825_c1_2583_4034 483
104 3300050507 nmdc:mga05p37_6859_c1 nmdc:mga05p37_6859_c1_3113_4576 483
105 3300053086 Ga0500578_0000155 Ga0500578_0000155_29529_30992 483
106 3300053086 Ga0500578_0025899 Ga0500578_0025899_1284_2744 483
107 3300053086 Ga0500578_0106565 Ga0500578_0106565_106_1569 483
108 3300053090 Ga0500646_0024706 Ga0500646_0024706_34_1503 483
109 3300053092 Ga0500583_0000005 Ga0500583_0000005_56041_57495 483
110 3300053092 Ga0500583_0000043 Ga0500583_0000043_42802_44262 483
111 3300053092 Ga0500583_0000125 Ga0500583_0000125_27806_29260 483
112 3300053092 Ga0500583_0002977 Ga0500583_0002977_3288_4742 483
113 3300053131 Ga0500652_005610 Ga0500652_005610_2238_3698 483
114 3300053177 Ga0500636_0031003 Ga0500636_0031003_453_1919 483
115 3300001989 JGI24739J22299_10000561 JGI24739J22299_1000056111 484
116 3300003771 Ga0055526_1018549 Ga0055526_10185491 484
117 3300003790 Ga0055528_1000239 Ga0055528_100023910 484
118 3300003791 Ga0055530_10001812 Ga0055530_1000181211 484
119 3300005262 Ga0065165_1000657 Ga0065165_100065739 484
120 3300013100 Ga0157373_10158012 Ga0157373_101580121 484
121 3300025273 Ga0209673_1000263 Ga0209673_100026345 484
122 3300025295 Ga0209564_1004430 Ga0209564_10044305 484
123 3300025295 Ga0209564_1011213 Ga0209564_10112131 484
124 3300025297 Ga0209758_1003312 Ga0209758_10033125 484
125 3300025298 Ga0209050_1000323 Ga0209050_100032319 484
126 3300025303 Ga0209051_1017857 Ga0209051_10178572 484
127 3300031616 Ga0307508_10002685 Ga0307508_100026857 484
128 3300044683 Ga0466965_0021354 Ga0466965_0021354_254_1708 484
129 3300049571 Ga0501034_0182630 Ga0501034_0182630_449_1906 484
130 3300049581 Ga0501047_0091975 Ga0501047_0091975_820_2304 484
131 3300049823 Ga0501044_0063221 Ga0501044_0063221_774_2258 484
132 3300053151 Ga0500604_0000943 Ga0500604_0000943_2381_3841 484

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14322

SusD-like_3

Starch-binding associating with outer membrane

63

259

0.84

PF07980

SusD_RagB

SusD family

287

502

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
2wqh-assembly1.cif.gz_A-2 crystal structure of ctpr3y3 0.7908 95 240
3l22-assembly1.cif.gz_A crystal structure of a susd superfamily protein (bf_0597) from bacteroides fragilis at 2.05 a resolution 0.781 34 477
6vfi-assembly1.cif.gz_B de novo designed octahedral nanoparticle o43_dn18 0.7792 95 240
6v8e-assembly1.cif.gz_A computationally designed c3-symmetric homotrimer from tpr repeat protein 0.7718 95 240
1na0-assembly1.cif.gz_A design of stable alpha-helical arrays from an idealized tpr motif 0.7682 95 240
ID Description Score Start End Superfamily
af_Q4DIV7_79_246_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8213 98 238 1.25.40.10
af_Q8I510_494_639_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8213 95 240 1.25.40.10
af_I1L8H9_27_173_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.817 98 240 1.25.40.10
af_Q6ZM24_6_136_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8057 95 241 1.25.40.10
af_F1RBN2_125_252_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8032 95 241 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A7T9TB78-F1-model_v4 deleted 0.9521 31 484
AF-A0A6N8L0A3-F1-model_v4 RagB/SusD family nutrient uptake outer membrane protein 0.9507 18 484 GO:0009279
AF-H8KWF7-F1-model_v4 RagB/SusD family protein 0.9477 18 484
AF-A0A497Y4X2-F1-model_v4 SusD-like starch-binding protein associating with outer membrane 0.947 18 484 GO:0009279
AF-U2HVR7-F1-model_v4 SusD-like N-terminal domain-containing protein 0.9467 17 484 GO:0009279

Feature Viewer

pLDDT pTM Quality
85.55 0.87 High
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Predicted Structure (AlphaFold2)

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