F152981

General Info

Members Datasets Scaffolds Average Seq Length
132 94 264 354

Family's Representative Sequence

Representative Sequence 3300025917|Ga0207660_10282846|Ga0207660_102828461
Length 386
Sequence VGSSVETVHKTRRASDENIWGSWCLTVKIFVLTDIPSPYQTEIFNQIAADSCELHVGYLRGADPSRRWGEVKINHESTTLDAGSDKLARVTKVVSDSDFAVFNYYRHPNAEKLIYHRANAQHPWCFWGERPGFRKPEWVGRILRHWKLKPLRLSTAPIWCIGRFAVDQYKREFGSRRTYLNLPYFSDLDRFRVDTPGVNGAKRDRVFLFSGALTRRKGVDLLARAFERLARDEHNVTLRILGDGPLRKDLETILAPVADRVQFVGFKDWSELPKQYATADVLCVPSRYDGWGLVVPEGLAAGLPVIATDRMGSALEFIRTGYNGWMVKAGSLSALMNAMRDAVSLSVEDLSLLSANARESVCDHTLQQGAQRFVQYANEAVANWRS

Samples

Sample ID Description Type Environment
1 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
80 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
81 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
82 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
83 3300049518 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_B_5_control Metagenome Rhizosphere
84 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
85 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
86 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
87 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
88 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
89 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
90 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
91 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
92 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
93 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
94 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.76
Nodule 0
Rhizoplane 1.52
Rhizosphere 97.73
Stem 0
Stem Tuber 0
Unclassified 23.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207660_10282846 3300025917 Bacteria 1317
2 JGI25406J46586_10013127 3300003203 Unclassified 3571
3 Ga0065714_10064457 3300005288 Bacteria 69065
4 Ga0065704_10014878 3300005289 Bacteria 2037
5 Ga0065712_10067742 3300005290 Bacteria 73878
6 Ga0065715_10090576 3300005293 Bacteria 6759
7 Ga0065707_10139546 3300005295 Unclassified 1791
8 Ga0070690_100010362 3300005330 Bacteria 5423
9 Ga0070670_100075897 3300005331 Bacteria 2888
10 Ga0070670_100089259 3300005331 Bacteria 2650
11 Ga0070680_100265075 3300005336 Unclassified 1454
12 Ga0070689_100000966 3300005340 Bacteria 17933
13 Ga0070687_100002402 3300005343 Bacteria 6996
14 Ga0070687_100069199 3300005343 Unclassified 1889
15 Ga0070692_10004745 3300005345 Bacteria 5705
16 Ga0070669_100071681 3300005353 Unclassified 2564
17 Ga0070659_100067084 3300005366 Bacteria 2845
18 Ga0070700_100000444 3300005441 Bacteria 20953
19 Ga0070694_100047132 3300005444 Unclassified 2895
20 Ga0070694_100068965 3300005444 Unclassified 2431
21 Ga0070694_100129687 3300005444 Bacteria 1820
22 Ga0070706_100000002 3300005467 Bacteria 326510
23 Ga0070698_100015460 3300005471 Bacteria 8063
24 Ga0070698_100026406 3300005471 Bacteria 6044
25 Ga0070698_100136183 3300005471 Unclassified 2410
26 Ga0070699_100001161 3300005518 Bacteria 24445
27 Ga0070699_100015207 3300005518 Bacteria 6612
28 Ga0070699_100124128 3300005518 Bacteria 2272
29 Ga0070679_100101668 3300005530 Bacteria 2861
30 Ga0068853_100181019 3300005539 Unclassified 1911
31 Ga0070696_100144426 3300005546 Bacteria 1742
32 Ga0070696_100272952 3300005546 Unclassified 1286
33 Ga0070704_100270099 3300005549 Unclassified 1405
34 Ga0068857_100158544 3300005577 Unclassified 2053
35 Ga0068856_100093748 3300005614 Unclassified 2988
36 Ga0068852_100047776 3300005616 Bacteria 3654
37 Ga0068859_100019511 3300005617 Bacteria 6812
38 Ga0068859_100090272 3300005617 Bacteria 3115
39 Ga0068859_100121731 3300005617 Bacteria 2676
40 Ga0068859_100264804 3300005617 Bacteria 1811
41 Ga0068861_100139337 3300005719 Unclassified 1978
42 Ga0068863_100123397 3300005841 Unclassified 2471
43 Ga0068862_100056527 3300005844 Bacteria 3362
44 Ga0081539_10002218 3300005985 Bacteria 28319
45 Ga0070716_100024788 3300006173 Bacteria 3195
46 Ga0068871_100075376 3300006358 Bacteria 2785
47 Ga0075431_100207780 3300006847 Bacteria 2001
48 Ga0075433_10076262 3300006852 Bacteria 2952
49 Ga0075434_100052696 3300006871 Bacteria 4043
50 Ga0097620_100019511 3300006931 Bacteria 6812
51 Ga0097620_100090270 3300006931 Bacteria 3115
52 Ga0097620_100264811 3300006931 Bacteria 1811
53 Ga0075435_100020398 3300007076 Bacteria 5078
54 Ga0111539_10005912 3300009094 Bacteria 15809
55 Ga0111539_10006848 3300009094 Bacteria 14641
56 Ga0111539_10011425 3300009094 Bacteria 11145
57 Ga0111539_10021361 3300009094 Bacteria 7969
58 Ga0105245_10058096 3300009098 Bacteria 3481
59 Ga0105245_10101979 3300009098 Bacteria 2657
60 Ga0105245_10430848 3300009098 Unclassified 1323
61 Ga0114129_10002436 3300009147 Bacteria 25821
62 Ga0114129_10111424 3300009147 Bacteria 3776
63 Ga0114129_10173190 3300009147 Bacteria 2941
64 Ga0114129_10635626 3300009147 Unclassified 1379
65 Ga0105243_10194614 3300009148 Bacteria 1774
66 Ga0105248_10003801 3300009177 Bacteria 16737
67 Ga0105248_10011857 3300009177 Bacteria 9617
68 Ga0105248_10136402 3300009177 Bacteria 2768
69 Ga0105248_10241957 3300009177 Unclassified 2031
70 Ga0105237_10070484 3300009545 Bacteria 3492
71 Ga0105249_10040604 3300009553 Bacteria 4227
72 Ga0105239_10047457 3300010375 Bacteria 4707
73 Ga0105246_10119808 3300011119 Unclassified 1948
74 Ga0157378_10024510 3300013297 Bacteria 5310
75 Ga0157378_10289896 3300013297 Unclassified 1581
76 Ga0163162_10177836 3300013306 Bacteria 2254
77 Ga0157375_10032455 3300013308 Bacteria 4953
78 Ga0157375_10051514 3300013308 Unclassified 4043
79 Ga0157380_10001700 3300014326 Bacteria 14537
80 Ga0157380_10003310 3300014326 Bacteria 11052
81 Ga0157380_10012993 3300014326 Bacteria 6054
82 Ga0157380_10324246 3300014326 Bacteria 1429
83 Ga0207647_10146921 3300025904 Unclassified 1379
84 Ga0207643_10008349 3300025908 Bacteria 5557
85 Ga0207684_10000065 3300025910 Bacteria 194463
86 Ga0207662_10003704 3300025918 Bacteria 7919
87 Ga0207652_10245111 3300025921 Unclassified 1616
88 Ga0207694_10184689 3300025924 Unclassified 1692
89 Ga0207650_10055491 3300025925 Bacteria 2941
90 Ga0207687_10072190 3300025927 Unclassified 2468
91 Ga0207670_10001571 3300025936 Bacteria 11970
92 Ga0207665_10037233 3300025939 Bacteria 3238
93 Ga0207711_10118342 3300025941 Bacteria 2363
94 Ga0207712_10087964 3300025961 Bacteria 2280
95 Ga0207641_10231813 3300026088 Unclassified 1716
96 Ga0207648_10150163 3300026089 Bacteria 2056
97 Ga0207676_10062367 3300026095 Bacteria 2956
98 Ga0207674_10034189 3300026116 Bacteria 5318
99 Ga0207675_100073804 3300026118 Bacteria 3192
100 Ga0207675_100161816 3300026118 Unclassified 2135
101 Ga0207428_10002521 3300027907 Bacteria 18277
102 Ga0207428_10032908 3300027907 Bacteria 4262
103 Ga0207428_10084594 3300027907 Bacteria 2472
104 Ga0268264_10017362 3300028381 Bacteria 5895
105 Ga0265327_10006138 3300031251 Bacteria 9724
106 Ga0307405_10006731 3300031731 Bacteria 5681
107 Ga0307413_10043113 3300031824 Bacteria 2657
108 Ga0307409_100113333 3300031995 Bacteria 2279
109 Ga0307416_100045888 3300032002 Bacteria 3444
110 Ga0307414_10057403 3300032004 Bacteria 2736
111 Ga0395898_0204375 3300037466 Bacteria 1885
112 Ga0439458_0006212 3300042157 Bacteria 2666
113 Ga0496104_0214890 3300048907 Bacteria 1835
114 Ga0496107_0042843 3300048910 Unclassified 3252
115 Ga0501291_011016 3300049514 Unclassified 1297
116 Ga0501295_017479 3300049518 Bacteria 1260
117 Ga0501298_000763 3300049521 Unclassified 4527
118 Ga0501298_003853 3300049521 Bacteria 2342
119 Ga0501217_027060 3300049661 Bacteria 1389
120 Ga0501227_029745 3300049665 Bacteria 1304
121 Ga0501261_001975 3300049690 Bacteria 2531
122 Ga0501225_0021805 3300049705 Bacteria 1768
123 Ga0501083_0097018 3300049744 Bacteria 1945
124 nmdc:mga06r32_191039_c1 3300050510 Bacteria 2035
125 nmdc:mga08y16_187058_c1 3300050511 Bacteria 2149
126 nmdc:mga08y16_67175_c1 3300050511 Bacteria 3741
127 nmdc:mga08y16_71621_c1 3300050511 Bacteria 3612
128 nmdc:mga08y16_95924_c1 3300050511 Bacteria 3089
129 nmdc:mga0rr50_86393_c1 3300050513 Bacteria 2433
130 nmdc:mga0a205_164614_c1 3300050515 Bacteria 2114
131 nmdc:mga0a205_46053_c1 3300050515 Unclassified 4206
132 Ga0500568_0007209 3300053139 Bacteria 5480
133 Ga0207660_10282846
134 JGI25406J46586_10013127
135 Ga0065714_10064457
136 Ga0065704_10014878
137 Ga0065712_10067742
138 Ga0065715_10090576
139 Ga0065707_10139546
140 Ga0070690_100010362
141 Ga0070670_100075897
142 Ga0070670_100089259
143 Ga0070680_100265075
144 Ga0070689_100000966
145 Ga0070687_100002402
146 Ga0070687_100069199
147 Ga0070692_10004745
148 Ga0070669_100071681
149 Ga0070659_100067084
150 Ga0070700_100000444
151 Ga0070694_100047132
152 Ga0070694_100068965
153 Ga0070694_100129687
154 Ga0070706_100000002
155 Ga0070698_100015460
156 Ga0070698_100026406
157 Ga0070698_100136183
158 Ga0070699_100001161
159 Ga0070699_100015207
160 Ga0070699_100124128
161 Ga0070679_100101668
162 Ga0068853_100181019
163 Ga0070696_100144426
164 Ga0070696_100272952
165 Ga0070704_100270099
166 Ga0068857_100158544
167 Ga0068856_100093748
168 Ga0068852_100047776
169 Ga0068859_100019511
170 Ga0068859_100090272
171 Ga0068859_100121731
172 Ga0068859_100264804
173 Ga0068861_100139337
174 Ga0068863_100123397
175 Ga0068862_100056527
176 Ga0081539_10002218
177 Ga0070716_100024788
178 Ga0068871_100075376
179 Ga0075431_100207780
180 Ga0075433_10076262
181 Ga0075434_100052696
182 Ga0097620_100019511
183 Ga0097620_100090270
184 Ga0097620_100264811
185 Ga0075435_100020398
186 Ga0111539_10005912
187 Ga0111539_10006848
188 Ga0111539_10011425
189 Ga0111539_10021361
190 Ga0105245_10058096
191 Ga0105245_10101979
192 Ga0105245_10430848
193 Ga0114129_10002436
194 Ga0114129_10111424
195 Ga0114129_10173190
196 Ga0114129_10635626
197 Ga0105243_10194614
198 Ga0105248_10003801
199 Ga0105248_10011857
200 Ga0105248_10136402
201 Ga0105248_10241957
202 Ga0105237_10070484
203 Ga0105249_10040604
204 Ga0105239_10047457
205 Ga0105246_10119808
206 Ga0157378_10024510
207 Ga0157378_10289896
208 Ga0163162_10177836
209 Ga0157375_10032455
210 Ga0157375_10051514
211 Ga0157380_10001700
212 Ga0157380_10003310
213 Ga0157380_10012993
214 Ga0157380_10324246
215 Ga0207647_10146921
216 Ga0207643_10008349
217 Ga0207684_10000065
218 Ga0207662_10003704
219 Ga0207652_10245111
220 Ga0207694_10184689
221 Ga0207650_10055491
222 Ga0207687_10072190
223 Ga0207670_10001571
224 Ga0207665_10037233
225 Ga0207711_10118342
226 Ga0207712_10087964
227 Ga0207641_10231813
228 Ga0207648_10150163
229 Ga0207676_10062367
230 Ga0207674_10034189
231 Ga0207675_100073804
232 Ga0207675_100161816
233 Ga0207428_10002521
234 Ga0207428_10032908
235 Ga0207428_10084594
236 Ga0268264_10017362
237 Ga0265327_10006138
238 Ga0307405_10006731
239 Ga0307413_10043113
240 Ga0307409_100113333
241 Ga0307416_100045888
242 Ga0307414_10057403
243 Ga0395898_0204375
244 Ga0439458_0006212
245 Ga0496104_0214890
246 Ga0496107_0042843
247 Ga0501291_011016
248 Ga0501295_017479
249 Ga0501298_000763
250 Ga0501298_003853
251 Ga0501217_027060
252 Ga0501227_029745
253 Ga0501261_001975
254 Ga0501225_0021805
255 Ga0501083_0097018
256 nmdc:mga06r32_191039_c1
257 nmdc:mga08y16_187058_c1
258 nmdc:mga08y16_67175_c1
259 nmdc:mga08y16_71621_c1
260 nmdc:mga08y16_95924_c1
261 nmdc:mga0rr50_86393_c1
262 nmdc:mga0a205_164614_c1
263 nmdc:mga0a205_46053_c1
264 Ga0500568_0007209

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00534

Glycos_transf_1

Glycosyl transferases group 1

194

360

0.94

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

204

344

0.91

PF20706

GT4-conflict

Family 4 Glycosyltransferase in conflict systems

158

358

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8836 179 339
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8682 179 339
7ec1-assembly1.cif.gz_B crystal structure of sdgb (ligand-free form) 0.8431 61 357
3qhp-assembly2.cif.gz_B crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8412 179 336
7ec6-assembly1.cif.gz_A crystal structure of sdgb (complexed with peptides) 0.8398 75 357
ID Description Score Start End Superfamily
af_Q2G0L2_318_480_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9205 175 337 3.40.50.2000
af_P9WMZ3_200_365_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9201 182 336 3.40.50.2000
af_Q4CUY7_207_349_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9136 178 316 3.40.50.2000
af_Q58469_205_369_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9126 176 333 3.40.50.2000
af_Q2G0L3_321_481_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9115 183 342 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A1F2S4V5-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9671 1 358 GO:0016757
AF-A0A1F2S4V5-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9591 1 358 GO:0016757
AF-A0A366HRZ6-F1-model_v4 Glycosyltransferase involved in cell wall biosynthesis 0.9522 3 362 GO:0016757
AF-A0A366HRZ6-F1-model_v4 Glycosyltransferase involved in cell wall biosynthesis 0.9344 3 362 GO:0016757
AF-A0A2V7CAM3-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9099 176 358 GO:0016757

Map