F150364

General Info

Members Datasets Scaffolds Average Seq Length
131 94 131 299

Family's Representative Sequence

Representative Sequence 3300046535|Ga0495586_0014244|Ga0495586_0014244_3154_4212
Length 352
Sequence LPRVSTFERSIASANFPNSSAEIVTDIAPSLDLGMAYPCLSRGSVKMARAKQTPQIKQMTISQWEAAFPDENACAAYLVEHRWGDVISCPRCGNVAVKAHGTLPWHWHCNACSPSATNYRFSHITGTIFENTNKPLRDWFRVLHLMLVSKKGISARQLWRMMDFGSLKTAWYMAHRLRAGMANEDFRKLMGIVEVDETFVGGKAHNKHWDKRDGGGRGGMGSGKIPVVGAVARKGKVVARVIETVSGDILRSFVRGAVSEKVSLLVTDEWVGYRGLDTDYPHHVIRHTSGQYVVGAIHTNTIEGFWSIFKRGVVGTFHKVSAKYLPLYVAEFQFRYNNRDNVDIFGEAISGC

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
30 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
49 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
50 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
51 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
52 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
53 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
54 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
57 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
60 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
61 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
65 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
66 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
67 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
68 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
69 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
70 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
71 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
72 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
73 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
74 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
75 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
76 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
77 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
78 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
79 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
80 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
83 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
84 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
87 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
88 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
89 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
91 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
92 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
93 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
94 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.76
Nodule 0
Rhizoplane 0.76
Rhizosphere 93.89
Stem 0
Stem Tuber 0
Unclassified 4.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10304664 3300005293 Bacteria 1033
2 Ga0070658_10024889 3300005327 Bacteria 4801
3 Ga0070676_10115396 3300005328 Bacteria 1678
4 Ga0068869_100019094 3300005334 Bacteria 4677
5 Ga0070666_10000605 3300005335 Bacteria 21602
6 Ga0070680_100000143 3300005336 Bacteria 43507
7 Ga0070661_100053474 3300005344 Bacteria 2956
8 Ga0070659_100045133 3300005366 Bacteria 3452
9 Ga0070714_100416193 3300005435 Unclassified 1272
10 Ga0070713_100110006 3300005436 Bacteria 2401
11 Ga0070713_100556805 3300005436 Unclassified 1086
12 Ga0070708_100123866 3300005445 Unclassified 2387
13 Ga0070681_10151746 3300005458 Unclassified 2243
14 Ga0070706_100007314 3300005467 Bacteria 10360
15 Ga0070706_100503759 3300005467 Bacteria 1126
16 Ga0070707_100056632 3300005468 Bacteria 3760
17 Ga0070707_100458422 3300005468 Bacteria 1235
18 Ga0070679_100000879 3300005530 Bacteria 26085
19 Ga0070665_100000656 3300005548 Bacteria 46656
20 Ga0070665_100144740 3300005548 Bacteria 2380
21 Ga0070665_100228674 3300005548 Unclassified 1860
22 Ga0068852_100004586 3300005616 Bacteria 9785
23 Ga0070717_10155218 3300006028 Bacteria 1982
24 Ga0070712_100000035 3300006175 Bacteria 67881
25 Ga0075434_100081460 3300006871 Bacteria 3234
26 Ga0075434_100082465 3300006871 Plasmid 3213
27 Ga0075434_100145795 3300006871 Bacteria 2388
28 Ga0075435_100155751 3300007076 Unclassified 1922
29 Ga0105240_10008444 3300009093 Bacteria 14732
30 Ga0105240_10034127 3300009093 Bacteria 6566
31 Ga0105240_10165353 3300009093 Unclassified 2625
32 Ga0105243_10195187 3300009148 Bacteria 1771
33 Ga0105248_10122777 3300009177 Bacteria 2930
34 Ga0105238_10028001 3300009551 Bacteria 5742
35 Ga0105238_10054136 3300009551 Bacteria 4031
36 Ga0105238_10108502 3300009551 Bacteria 2757
37 Ga0157370_10504702 3300013104 Bacteria 1111
38 Ga0157369_10087388 3300013105 Unclassified 3329
39 Ga0157369_10236995 3300013105 Bacteria 1906
40 Ga0157372_10238851 3300013307 Bacteria 2108
41 Ga0157379_10190421 3300014968 Unclassified 1854
42 Ga0207680_10000878 3300025903 Bacteria 14184
43 Ga0207684_10012517 3300025910 Bacteria 7376
44 Ga0207707_10000011 3300025912 Bacteria 282857
45 Ga0207695_10000012 3300025913 Bacteria 840961
46 Ga0207695_10002278 3300025913 Bacteria 28735
47 Ga0207695_10145430 3300025913 Unclassified 2315
48 Ga0207693_10000130 3300025915 Bacteria 67900
49 Ga0207660_10000289 3300025917 Bacteria 33248
50 Ga0207649_10006635 3300025920 Bacteria 6289
51 Ga0207652_10002255 3300025921 Bacteria 16374
52 Ga0207646_10023826 3300025922 Bacteria 5617
53 Ga0207646_10037959 3300025922 Bacteria 4341
54 Ga0207694_10027583 3300025924 Bacteria 4325
55 Ga0207694_10031484 3300025924 Bacteria 4053
56 Ga0207694_10169234 3300025924 Unclassified 1769
57 Ga0207694_10373005 3300025924 Bacteria 1183
58 Ga0207664_10316366 3300025929 Unclassified 1376
59 Ga0207690_10029831 3300025932 Bacteria 3472
60 Ga0207689_10027879 3300025942 Bacteria 4726
61 Ga0207667_10095368 3300025949 Bacteria 3071
62 Ga0207639_10004933 3300026041 Bacteria 8989
63 Ga0207698_10063109 3300026142 Bacteria 2897
64 Ga0268266_10004914 3300028379 Bacteria 12666
65 Ga0265338_10037746 3300028800 Bacteria 4589
66 Ga0265338_10043754 3300028800 Bacteria 4147
67 Ga0265338_10128378 3300028800 Bacteria 2007
68 Ga0265325_10006821 3300031241 Bacteria 6903
69 Ga0265340_10008935 3300031247 Bacteria 5399
70 Ga0265340_10050659 3300031247 Bacteria 2013
71 Ga0265339_10066207 3300031249 Bacteria 1935
72 Ga0265331_10017617 3300031250 Bacteria 3720
73 Ga0265313_10000106 3300031595 Bacteria 83923
74 Ga0265313_10000251 3300031595 Bacteria 58545
75 Ga0265313_10001332 3300031595 Bacteria 23248
76 Ga0265314_10000522 3300031711 Bacteria 49570
77 Ga0265314_10004762 3300031711 Bacteria 12436
78 Ga0265342_10055414 3300031712 Bacteria 2353
79 Ga0395900_0000473 3300037418 Bacteria 57503
80 Ga0395900_0003773 3300037418 Bacteria 16234
81 Ga0395898_0044532 3300037466 Bacteria 4367
82 Ga0395898_0056538 3300037466 Bacteria 3824
83 Ga0436364_0014687 3300037853 Bacteria 3332
84 Ga0436364_1466512 3300037853 Bacteria 2621
85 Ga0395901_0070859 3300038443 Unclassified 3632
86 Ga0395901_0147213 3300038443 Bacteria 2475
87 Ga0436361_0732248 3300039447 Bacteria 1411
88 Ga0436363_1018481 3300039450 Bacteria 5402
89 Ga0436363_1154058 3300039450 Bacteria 7036
90 Ga0453683_0014657 3300044673 Bacteria 5086
91 Ga0451576_0038611 3300045051 Bacteria 5053
92 Ga0495592_0002176 3300046454 Viruses 13793
93 Ga0495629_0005938 3300046459 Bacteria 9097
94 Ga0495651_0034992 3300046462 Viruses 3914
95 Ga0495653_0024557 3300046463 Viruses 4855
96 Ga0495582_0002481 3300046473 Bacteria 10271
97 Ga0495582_0235277 3300046473 Bacteria 1049
98 Ga0495664_0104866 3300046477 Unclassified 1704
99 Ga0495630_0047503 3300046517 Unclassified 3211
100 Ga0495652_0003144 3300046529 Bacteria 16477
101 Ga0495652_0034090 3300046529 Bacteria 4439
102 Ga0495640_0034230 3300046533 Viruses 3604
103 Ga0495586_0014244 3300046535 Viruses 4225
104 Ga0495667_0000981 3300046559 Bacteria 18460
105 Ga0495634_0005472 3300046642 Bacteria 9767
106 Ga0495657_0099715 3300046675 Bacteria 1852
107 Ga0495599_0064599 3300046678 Bacteria 2286
108 Ga0495658_0000734 3300046683 Bacteria 17679
109 Ga0495613_0004715 3300046689 Bacteria 10234
110 Ga0495674_0002229 3300047319 Bacteria 19056
111 Ga0495680_0009620 3300047322 Bacteria 8680
112 Ga0495680_0027899 3300047322 Bacteria 4633
113 Ga0495684_0035147 3300047471 Unclassified 3844
114 Ga0496107_0165015 3300048910 Bacteria 1642
115 Ga0496126_0001768 3300048929 Bacteria 31983
116 Ga0496126_0001867 3300048929 Bacteria 30682
117 Ga0501033_0016932 3300049570 Bacteria 5509
118 Ga0501038_0100407 3300049574 Bacteria 2411
119 Ga0501067_0057666 3300049583 Bacteria 2150
120 Ga0501070_0000416 3300049586 Bacteria 38782
121 Ga0501070_0115568 3300049586 Bacteria 2216
122 Ga0501080_0008960 3300049742 Bacteria 9101
123 Ga0501080_0035947 3300049742 Bacteria 4624
124 Ga0501035_0000691 3300049822 Bacteria 36833
125 Ga0501044_0011164 3300049823 Bacteria 9743
126 nmdc:mga0n895_18286_c1 3300050512 Bacteria 6481
127 nmdc:mga0n895_485286_c1 3300050512 Bacteria 1246
128 nmdc:mga0n895_96767_c1 3300050512 Bacteria 2957
129 Ga0495601_0010821 3300053077 Bacteria 5442
130 Ga0500658_0002257 3300053134 Bacteria 7473
131 Ga0501084_0000452 3300054114 Bacteria 31589

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005435 Ga0070714_100416193 Ga0070714_1004161932 255
2 3300005436 Ga0070713_100110006 Ga0070713_1001100062 255
3 3300007076 Ga0075435_100155751 Ga0075435_1001557512 255
4 3300025929 Ga0207664_10316366 Ga0207664_103163662 255
5 3300005335 Ga0070666_10000605 Ga0070666_1000060510 262
6 3300025903 Ga0207680_10000878 Ga0207680_1000087811 262
7 3300028800 Ga0265338_10037746 Ga0265338_100377462 266
8 3300039447 Ga0436361_0732248 Ga0436361_0732248_531_1394 268
9 3300053134 Ga0500658_0002257 Ga0500658_0002257_3659_4576 270
10 3300037853 Ga0436364_0014687 Ga0436364_0014687_477_1367 271
11 3300037418 Ga0395900_0003773 Ga0395900_0003773_480_1346 273
12 3300037466 Ga0395898_0056538 Ga0395898_0056538_2589_3455 273
13 3300038443 Ga0395901_0147213 Ga0395901_0147213_154_1020 273
14 3300049586 Ga0501070_0115568 Ga0501070_0115568_212_1084 274
15 3300006175 Ga0070712_100000035 Ga0070712_10000003575 275
16 3300013307 Ga0157372_10238851 Ga0157372_102388511 275
17 3300025915 Ga0207693_10000130 Ga0207693_1000013062 275
18 3300005468 Ga0070707_100056632 Ga0070707_1000566325 276
19 3300025922 Ga0207646_10037959 Ga0207646_100379592 276
20 3300031241 Ga0265325_10006821 Ga0265325_100068211 276
21 3300009551 Ga0105238_10108502 Ga0105238_101085023 277
22 3300013104 Ga0157370_10504702 Ga0157370_105047021 277
23 3300013105 Ga0157369_10236995 Ga0157369_102369952 277
24 3300039450 Ga0436363_1154058 Ga0436363_1154058_5981_6865 277
25 3300048910 Ga0496107_0165015 Ga0496107_0165015_581_1468 277
26 3300005366 Ga0070659_100045133 Ga0070659_1000451333 278
27 3300014968 Ga0157379_10190421 Ga0157379_101904212 278
28 3300025932 Ga0207690_10029831 Ga0207690_100298311 278
29 3300025949 Ga0207667_10095368 Ga0207667_100953683 278
30 3300037418 Ga0395900_0000473 Ga0395900_0000473_54909_55805 278
31 3300046675 Ga0495657_0099715 Ga0495657_0099715_650_1561 278
32 3300047322 Ga0495680_0027899 Ga0495680_0027899_1606_2517 278
33 3300048929 Ga0496126_0001768 Ga0496126_0001768_30623_31504 278
34 3300048929 Ga0496126_0001867 Ga0496126_0001867_27611_28492 278
35 3300005328 Ga0070676_10115396 Ga0070676_101153962 279
36 3300005334 Ga0068869_100019094 Ga0068869_1000190944 279
37 3300005548 Ga0070665_100144740 Ga0070665_1001447403 279
38 3300009093 Ga0105240_10034127 Ga0105240_100341277 279
39 3300009148 Ga0105243_10195187 Ga0105243_101951872 279
40 3300009551 Ga0105238_10028001 Ga0105238_100280012 279
41 3300009551 Ga0105238_10054136 Ga0105238_100541365 279
42 3300025913 Ga0207695_10002278 Ga0207695_1000227819 279
43 3300025924 Ga0207694_10027583 Ga0207694_100275833 279
44 3300025924 Ga0207694_10373005 Ga0207694_103730052 279
45 3300025942 Ga0207689_10027879 Ga0207689_100278793 279
46 3300028800 Ga0265338_10128378 Ga0265338_101283781 279
47 3300031247 Ga0265340_10050659 Ga0265340_100506593 279
48 3300031595 Ga0265313_10000251 Ga0265313_1000025161 279
49 3300031711 Ga0265314_10004762 Ga0265314_1000476213 279
50 3300044673 Ga0453683_0014657 Ga0453683_0014657_3840_4757 279
51 3300045051 Ga0451576_0038611 Ga0451576_0038611_3807_4724 279
52 3300005327 Ga0070658_10024889 Ga0070658_100248897 280
53 3300005344 Ga0070661_100053474 Ga0070661_1000534743 280
54 3300005445 Ga0070708_100123866 Ga0070708_1001238663 280
55 3300005467 Ga0070706_100503759 Ga0070706_1005037591 280
56 3300006028 Ga0070717_10155218 Ga0070717_101552182 280
57 3300006871 Ga0075434_100082465 Ga0075434_1000824653 280
58 3300025920 Ga0207649_10006635 Ga0207649_100066352 280
59 3300025922 Ga0207646_10023826 Ga0207646_100238262 280
60 3300026041 Ga0207639_10004933 Ga0207639_100049339 280
61 3300031250 Ga0265331_10017617 Ga0265331_100176171 280
62 3300031595 Ga0265313_10000106 Ga0265313_1000010621 280
63 3300031595 Ga0265313_10001332 Ga0265313_1000133224 280
64 3300031711 Ga0265314_10000522 Ga0265314_1000052215 280
65 3300031712 Ga0265342_10055414 Ga0265342_100554142 280
66 3300037466 Ga0395898_0044532 Ga0395898_0044532_1384_2292 280
67 3300037853 Ga0436364_1466512 Ga0436364_1466512_1223_2137 280
68 3300039450 Ga0436363_1018481 Ga0436363_1018481_85_984 280
69 3300049574 Ga0501038_0100407 Ga0501038_0100407_1084_1980 280
70 3300049583 Ga0501067_0057666 Ga0501067_0057666_141_1037 280
71 3300049586 Ga0501070_0000416 Ga0501070_0000416_31285_32181 280
72 3300049742 Ga0501080_0008960 Ga0501080_0008960_6930_7826 280
73 3300049742 Ga0501080_0035947 Ga0501080_0035947_474_1370 280
74 3300049822 Ga0501035_0000691 Ga0501035_0000691_5897_6793 280
75 3300049823 Ga0501044_0011164 Ga0501044_0011164_8196_9092 280
76 3300050512 nmdc:mga0n895_18286_c1 nmdc:mga0n895_18286_c1_3189_4100 280
77 3300005468 Ga0070707_100458422 Ga0070707_1004584221 281
78 3300005548 Ga0070665_100000656 Ga0070665_10000065623 281
79 3300006871 Ga0075434_100145795 Ga0075434_1001457954 281
80 3300009093 Ga0105240_10165353 Ga0105240_101653532 281
81 3300009177 Ga0105248_10122777 Ga0105248_101227773 281
82 3300013105 Ga0157369_10087388 Ga0157369_100873883 281
83 3300025913 Ga0207695_10145430 Ga0207695_101454301 281
84 3300025924 Ga0207694_10169234 Ga0207694_101692342 281
85 3300028379 Ga0268266_10004914 Ga0268266_100049146 281
86 3300031247 Ga0265340_10008935 Ga0265340_100089352 281
87 3300038443 Ga0395901_0070859 Ga0395901_0070859_1728_2645 281
88 3300050512 nmdc:mga0n895_485286_c1 nmdc:mga0n895_485286_c1_82_984 281
89 3300005336 Ga0070680_100000143 Ga0070680_10000014346 282
90 3300005458 Ga0070681_10151746 Ga0070681_101517462 282
91 3300005467 Ga0070706_100007314 Ga0070706_1000073142 282
92 3300005530 Ga0070679_100000879 Ga0070679_1000008798 282
93 3300005548 Ga0070665_100228674 Ga0070665_1002286742 282
94 3300005616 Ga0068852_100004586 Ga0068852_1000045865 282
95 3300009093 Ga0105240_10008444 Ga0105240_1000844416 282
96 3300025910 Ga0207684_10012517 Ga0207684_100125172 282
97 3300025912 Ga0207707_10000011 Ga0207707_10000011118 282
98 3300025913 Ga0207695_10000012 Ga0207695_10000012417 282
99 3300025917 Ga0207660_10000289 Ga0207660_1000028934 282
100 3300025921 Ga0207652_10002255 Ga0207652_1000225520 282
101 3300025924 Ga0207694_10031484 Ga0207694_100314843 282
102 3300026142 Ga0207698_10063109 Ga0207698_100631093 282
103 3300028800 Ga0265338_10043754 Ga0265338_100437542 282
104 3300031249 Ga0265339_10066207 Ga0265339_100662072 282
105 3300046454 Ga0495592_0002176 Ga0495592_0002176_1909_2829 282
106 3300046459 Ga0495629_0005938 Ga0495629_0005938_3676_4596 282
107 3300046462 Ga0495651_0034992 Ga0495651_0034992_569_1489 282
108 3300046463 Ga0495653_0024557 Ga0495653_0024557_433_1353 282
109 3300046473 Ga0495582_0002481 Ga0495582_0002481_3658_4578 282
110 3300046473 Ga0495582_0235277 Ga0495582_0235277_25_948 282
111 3300046517 Ga0495630_0047503 Ga0495630_0047503_1244_2164 282
112 3300046529 Ga0495652_0003144 Ga0495652_0003144_6026_6946 282
113 3300046533 Ga0495640_0034230 Ga0495640_0034230_1841_2761 282
114 3300046535 Ga0495586_0014244 Ga0495586_0014244_3154_4212 282
115 3300046559 Ga0495667_0000981 Ga0495667_0000981_4031_4951 282
116 3300046642 Ga0495634_0005472 Ga0495634_0005472_4092_5012 282
117 3300046678 Ga0495599_0064599 Ga0495599_0064599_15_935 282
118 3300046683 Ga0495658_0000734 Ga0495658_0000734_13052_13972 282
119 3300046689 Ga0495613_0004715 Ga0495613_0004715_9143_10201 282
120 3300047319 Ga0495674_0002229 Ga0495674_0002229_18110_19030 282
121 3300047322 Ga0495680_0009620 Ga0495680_0009620_4277_5197 282
122 3300047471 Ga0495684_0035147 Ga0495684_0035147_687_1607 282
123 3300049570 Ga0501033_0016932 Ga0501033_0016932_4371_5282 282
124 3300054114 Ga0501084_0000452 Ga0501084_0000452_22031_22948 282
125 3300005436 Ga0070713_100556805 Ga0070713_1005568051 283
126 3300006871 Ga0075434_100081460 Ga0075434_1000814604 283
127 3300046477 Ga0495664_0104866 Ga0495664_0104866_477_1391 283
128 3300046529 Ga0495652_0034090 Ga0495652_0034090_2146_3060 283
129 3300050512 nmdc:mga0n895_96767_c1 nmdc:mga0n895_96767_c1_1470_2378 283
130 3300053077 Ga0495601_0010821 Ga0495601_0010821_3124_4038 283
131 3300005293 Ga0065715_10304664 Ga0065715_103046641 288

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12762

DDE_Tnp_IS1595

ISXO2-like transposase domain

188

337

0.96

PF12760

Zn_Tnp_IS1595

Transposase zinc-ribbon domain

69

115

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ou0-assembly1.cif.gz_A crystal structure of rpa32c 0.6976 89 128
1jhh-assembly1.cif.gz_A lexa s119a mutant 0.587 90 152
3jso-assembly1.cif.gz_A classic protein with a new twist: crystal structure of a lexa repressor dna complex 0.5296 90 157
3jsp-assembly1.cif.gz_B classic protein with a new twist: crystal structure of a lexa repressor dna complex 0.5269 90 158
6voy-assembly1.cif.gz_D cryo-em structure of htlv-1 instasome 0.5044 170 265
ID Description Score Start End Superfamily
af_E7F0M0_148_296_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7667 175 265 3.30.420.10
1jmrA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7078 83 135 1.10.10.10
4ou0A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.6975 89 128 1.10.10.10
af_C6KSM6_981_1284_1.25.40.990 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.6504 81 128 1.25.40.990
1dpuA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.6447 80 130 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A1F5P8M0-F1-model_v4 Transposase zinc-ribbon domain-containing protein 0.9498 18 132
AF-A0A519JXL5-F1-model_v4 IS1595 family transposase 0.9341 6 130
AF-A0A6L7TFF1-F1-model_v4 Transposase 0.9184 4 132
AF-A0A3C0FAD0-F1-model_v4 Transposase zinc-ribbon domain-containing protein 0.9076 6 133
AF-A0A7X0LHE3-F1-model_v4 Transposase-like protein 0.9061 3 131

Feature Viewer

pLDDT pTM Quality
80.16 0.79 High
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Predicted Structure (AlphaFold2)

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