F150112

General Info

Members Datasets Scaffolds Average Seq Length
131 66 262 814

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0020414|Ga0451577_0020414_3331_5847
Length 838
Sequence VAFAVKLELSKYSQDMPKSQNINPKVVRKPKFIEFGKIPVNQYNKQITEEKKNYTSADFIRIYHDMVVIREFETMLNLIKTTNEYNGIPYNHPGPAHLSIGQEASAVGMAYSLGIDDFIFGSHRSHGEILAKGLSAIDKLDDDTLYSVMKNYFGGSALGVVEKGFTGSNTKELAIRFLLYGALAEIFARENGFNKGLGGSMHAFFTPFGIYPNNAIVGGSGDISVGAALYKKINRKPGIVVCNIGDASMGCGPVWEGITFATMDQYKTLWDGDYRGGLPLIFNFMNNLYGMGGQTMGETMGYEILARIGAGVNPDSMHAERVDGYNPLAVIDAFKRKRQILEEKRGPVLLDTLTYRISGHSPSDASSYRSKEEIEAWQLEDSILNYGKALIDAGITSQNRLDDITSGTKIVLTEILKLTIDDTVSPRLNLNSDPDMIGKMMFSNNSADALEHGKPEVLMPIEENPRVKSIKNKERYYKDKEGKPVSKARLYQFRDGIFEAIIDRFYKDPTLAAWGEENRDWGGAFAVYRGLTEALPYQRLFNSPISEGAIVGTAIGYGMCGGRVIAEIMYCDFLGRSGDEVFNQLPKWQAMSGNLIKMPVVIRVSVGSKYGAQHSQDWSALTAHIPGLKVVFPATPYDAKGLMNSALQGTDPVIYFESQRIYDIGEMFHEGGVPEGYYEIPFGEPDVKRSGNDITILTIGATLYPAVKAADILHEKYGISAEIIDARSLVPFNYEPVIKSLEKTGKIVLASDASSRGSFLKEMAQTITELAFDYLDAPPVVVGSRNWITPAYEMEQYFFPQPDWIIDAIHERIMPLKGHVSRNDFSDQKIISLNKQGV

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
17 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
18 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
19 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
20 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
25 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
26 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
27 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
28 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
29 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
30 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
31 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
32 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
33 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
34 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
35 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
36 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
37 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
38 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
39 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
40 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
41 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
42 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
43 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
44 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
45 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
46 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
47 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
48 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
49 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
50 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
51 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
52 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
53 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
57 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
59 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
60 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
62 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
63 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
64 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
65 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
66 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.47
Stem 0
Stem Tuber 0
Unclassified 1.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0020414 3300042876 Bacteria 6080
2 Ga0070658_10018624 3300005327 Bacteria 5561
3 Ga0070669_100026178 3300005353 Bacteria 4196
4 Ga0070671_100006060 3300005355 Bacteria 9637
5 Ga0070673_100018097 3300005364 Bacteria 5028
6 Ga0070708_100000026 3300005445 Bacteria 97493
7 Ga0070698_100000098 3300005471 Bacteria 70405
8 Ga0068855_100014486 3300005563 Bacteria 9496
9 Ga0068855_100078691 3300005563 Bacteria 3824
10 Ga0068858_100011911 3300005842 Bacteria 8196
11 Ga0068860_100047710 3300005843 Bacteria 4081
12 Ga0068862_100059445 3300005844 Bacteria 3283
13 Ga0081539_10008010 3300005985 Bacteria 9375
14 Ga0081539_10015301 3300005985 Bacteria 5586
15 Ga0075430_100016846 3300006846 Bacteria 6225
16 Ga0075431_100043163 3300006847 Bacteria 4653
17 Ga0114129_10000598 3300009147 Bacteria 44512
18 Ga0114129_10015267 3300009147 Bacteria 10931
19 Ga0114129_10016832 3300009147 Bacteria 10409
20 Ga0114129_10054014 3300009147 Bacteria 5634
21 Ga0105248_10016402 3300009177 Bacteria 8152
22 Ga0105248_10021183 3300009177 Bacteria 7203
23 Ga0105239_10024118 3300010375 Bacteria 6700
24 Ga0157375_10140377 3300013308 Bacteria 2543
25 Ga0157379_10032797 3300014968 Bacteria 4631
26 Ga0207705_10015014 3300025909 Bacteria 5568
27 Ga0207691_10029136 3300025940 Bacteria 5165
28 Ga0207711_10020531 3300025941 Bacteria 5510
29 Ga0207641_10000354 3300026088 Bacteria 54823
30 Ga0265319_1007390 3300028563 Bacteria 4948
31 Ga0265334_10007973 3300028573 Bacteria 4523
32 Ga0265336_10012763 3300028666 Bacteria 2817
33 Ga0265338_10012431 3300028800 Bacteria 9705
34 Ga0265338_10036704 3300028800 Bacteria 4685
35 Ga0265330_10001324 3300031235 Bacteria 14478
36 Ga0265332_10001918 3300031238 Bacteria 11007
37 Ga0265328_10002930 3300031239 Bacteria 7622
38 Ga0265320_10002397 3300031240 Bacteria 13077
39 Ga0265320_10010755 3300031240 Bacteria 5424
40 Ga0265325_10000564 3300031241 Bacteria 26947
41 Ga0265339_10022041 3300031249 Bacteria 3695
42 Ga0265327_10007704 3300031251 Bacteria 8240
43 Ga0265316_10001063 3300031344 Bacteria 29748
44 Ga0265316_10002249 3300031344 Bacteria 20227
45 Ga0265316_10005212 3300031344 Bacteria 12709
46 Ga0265316_10022196 3300031344 Bacteria 5359
47 Ga0265316_10030405 3300031344 Bacteria 4428
48 Ga0265316_10033270 3300031344 Bacteria 4200
49 Ga0265313_10004579 3300031595 Bacteria 10525
50 Ga0265313_10007591 3300031595 Bacteria 7366
51 Ga0316575_10005172 3300031665 Unclassified 4637
52 Ga0316579_10005864 3300031691 Bacteria 4980
53 Ga0316579_10009948 3300031691 Unclassified 4010
54 Ga0265314_10005429 3300031711 Bacteria 11510
55 Ga0265314_10011795 3300031711 Bacteria 7186
56 Ga0265314_10021662 3300031711 Bacteria 4936
57 Ga0265342_10014067 3300031712 Bacteria 5324
58 Ga0265342_10025805 3300031712 Bacteria 3688
59 Ga0316577_10012983 3300031733 Bacteria 4545
60 Ga0316574_0008138 3300035398 Bacteria 5801
61 Ga0373947_0010496 3300035725 Bacteria 5313
62 Ga0316582_0002034 3300036647 Bacteria 9302
63 Ga0316582_0021076 3300036647 Bacteria 3843
64 Ga0316584_0001133 3300036712 Bacteria 15648
65 Ga0316584_0001935 3300036712 Bacteria 12907
66 Ga0316584_0010167 3300036712 Bacteria 6569
67 Ga0400483_070962 3300039062 Bacteria 33811
68 Ga0400483_276354 3300039062 Bacteria 23675
69 Ga0451577_0000090 3300042876 Bacteria 202241
70 Ga0451577_0001398 3300042876 Bacteria 32345
71 Ga0451577_0027958 3300042876 Bacteria 5102
72 Ga0453683_0000005 3300044673 Bacteria 741657
73 Ga0453683_0000065 3300044673 Bacteria 166630
74 Ga0453683_0000994 3300044673 Bacteria 26742
75 Ga0453683_0001788 3300044673 Bacteria 17781
76 Ga0453683_0002607 3300044673 Bacteria 13826
77 Ga0453683_0002784 3300044673 Bacteria 13301
78 Ga0453683_0005964 3300044673 Bacteria 8397
79 Ga0453683_0008537 3300044673 Bacteria 6872
80 Ga0453683_0012809 3300044673 Bacteria 5489
81 Ga0453683_0035189 3300044673 Bacteria 3156
82 Ga0453684_0000139 3300044712 Bacteria 320330
83 Ga0453684_0000322 3300044712 Bacteria 202241
84 Ga0453684_0000628 3300044712 Bacteria 128416
85 Ga0453684_0001448 3300044712 Bacteria 67464
86 Ga0453684_0001808 3300044712 Bacteria 56660
87 Ga0453684_0003469 3300044712 Bacteria 35413
88 Ga0453684_0004100 3300044712 Bacteria 31606
89 Ga0453684_0005576 3300044712 Bacteria 24800
90 Ga0453684_0006847 3300044712 Bacteria 21415
91 Ga0453684_0009535 3300044712 Bacteria 16959
92 Ga0453684_0009987 3300044712 Bacteria 16361
93 Ga0453684_0013138 3300044712 Bacteria 13504
94 Ga0453684_0013392 3300044712 Bacteria 13328
95 Ga0453684_0014816 3300044712 Bacteria 12415
96 Ga0453684_0015713 3300044712 Bacteria 11925
97 Ga0453684_0025680 3300044712 Bacteria 8543
98 Ga0453684_0037962 3300044712 Bacteria 6598
99 Ga0453684_0061333 3300044712 Bacteria 4828
100 Ga0453684_0086153 3300044712 Bacteria 3899
101 Ga0451576_0000195 3300045051 Bacteria 153276
102 Ga0451576_0000332 3300045051 Bacteria 114268
103 Ga0451576_0000429 3300045051 Bacteria 96447
104 Ga0451576_0000568 3300045051 Bacteria 78861
105 Ga0451576_0000604 3300045051 Bacteria 75646
106 Ga0451576_0001993 3300045051 Bacteria 32352
107 Ga0451576_0004909 3300045051 Bacteria 17064
108 Ga0451576_0007317 3300045051 Bacteria 13252
109 Ga0451576_0007410 3300045051 Bacteria 13127
110 Ga0451576_0023029 3300045051 Bacteria 6750
111 Ga0451576_0026404 3300045051 Bacteria 6247
112 Ga0451576_0031235 3300045051 Bacteria 5681
113 Ga0495580_0018110 3300046472 Bacteria 5250
114 Ga0495587_0022174 3300046536 Bacteria 3912
115 Ga0495602_0026350 3300048088 Bacteria 5608
116 Ga0501034_0000652 3300049571 Bacteria 53317
117 Ga0501043_0000317 3300049579 Bacteria 43799
118 Ga0501046_0000216 3300049580 Bacteria 60174
119 Ga0501047_0018184 3300049581 Bacteria 6735
120 Ga0501048_0004522 3300049582 Bacteria 10591
121 Ga0501073_0064324 3300049589 Bacteria 2558
122 Ga0501083_0000094 3300049744 Bacteria 60217
123 Ga0501035_0008209 3300049822 Bacteria 9732
124 Ga0501044_0072282 3300049823 Bacteria 3507
125 nmdc:mga05p37_25895_c1 3300050507 Bacteria 7131
126 nmdc:mga05p37_26121_c1 3300050507 Bacteria 7101
127 nmdc:mga05p37_33700_c1 3300050507 Bacteria 6273
128 nmdc:mga06r32_48175_c1 3300050510 Bacteria 4073
129 nmdc:mga08y16_21009_c1 3300050511 Bacteria 6892
130 nmdc:mga0a205_11050_c1 3300050515 Bacteria 8307
131 Ga0501082_0000087 3300060353 Bacteria 70464
132 Ga0451577_0020414
133 Ga0070658_10018624
134 Ga0070669_100026178
135 Ga0070671_100006060
136 Ga0070673_100018097
137 Ga0070708_100000026
138 Ga0070698_100000098
139 Ga0068855_100014486
140 Ga0068855_100078691
141 Ga0068858_100011911
142 Ga0068860_100047710
143 Ga0068862_100059445
144 Ga0081539_10008010
145 Ga0081539_10015301
146 Ga0075430_100016846
147 Ga0075431_100043163
148 Ga0114129_10000598
149 Ga0114129_10015267
150 Ga0114129_10016832
151 Ga0114129_10054014
152 Ga0105248_10016402
153 Ga0105248_10021183
154 Ga0105239_10024118
155 Ga0157375_10140377
156 Ga0157379_10032797
157 Ga0207705_10015014
158 Ga0207691_10029136
159 Ga0207711_10020531
160 Ga0207641_10000354
161 Ga0265319_1007390
162 Ga0265334_10007973
163 Ga0265336_10012763
164 Ga0265338_10012431
165 Ga0265338_10036704
166 Ga0265330_10001324
167 Ga0265332_10001918
168 Ga0265328_10002930
169 Ga0265320_10002397
170 Ga0265320_10010755
171 Ga0265325_10000564
172 Ga0265339_10022041
173 Ga0265327_10007704
174 Ga0265316_10001063
175 Ga0265316_10002249
176 Ga0265316_10005212
177 Ga0265316_10022196
178 Ga0265316_10030405
179 Ga0265316_10033270
180 Ga0265313_10004579
181 Ga0265313_10007591
182 Ga0316575_10005172
183 Ga0316579_10005864
184 Ga0316579_10009948
185 Ga0265314_10005429
186 Ga0265314_10011795
187 Ga0265314_10021662
188 Ga0265342_10014067
189 Ga0265342_10025805
190 Ga0316577_10012983
191 Ga0316574_0008138
192 Ga0373947_0010496
193 Ga0316582_0002034
194 Ga0316582_0021076
195 Ga0316584_0001133
196 Ga0316584_0001935
197 Ga0316584_0010167
198 Ga0400483_070962
199 Ga0400483_276354
200 Ga0451577_0000090
201 Ga0451577_0001398
202 Ga0451577_0027958
203 Ga0453683_0000005
204 Ga0453683_0000065
205 Ga0453683_0000994
206 Ga0453683_0001788
207 Ga0453683_0002607
208 Ga0453683_0002784
209 Ga0453683_0005964
210 Ga0453683_0008537
211 Ga0453683_0012809
212 Ga0453683_0035189
213 Ga0453684_0000139
214 Ga0453684_0000322
215 Ga0453684_0000628
216 Ga0453684_0001448
217 Ga0453684_0001808
218 Ga0453684_0003469
219 Ga0453684_0004100
220 Ga0453684_0005576
221 Ga0453684_0006847
222 Ga0453684_0009535
223 Ga0453684_0009987
224 Ga0453684_0013138
225 Ga0453684_0013392
226 Ga0453684_0014816
227 Ga0453684_0015713
228 Ga0453684_0025680
229 Ga0453684_0037962
230 Ga0453684_0061333
231 Ga0453684_0086153
232 Ga0451576_0000195
233 Ga0451576_0000332
234 Ga0451576_0000429
235 Ga0451576_0000568
236 Ga0451576_0000604
237 Ga0451576_0001993
238 Ga0451576_0004909
239 Ga0451576_0007317
240 Ga0451576_0007410
241 Ga0451576_0023029
242 Ga0451576_0026404
243 Ga0451576_0031235
244 Ga0495580_0018110
245 Ga0495587_0022174
246 Ga0495602_0026350
247 Ga0501034_0000652
248 Ga0501043_0000317
249 Ga0501046_0000216
250 Ga0501047_0018184
251 Ga0501048_0004522
252 Ga0501073_0064324
253 Ga0501083_0000094
254 Ga0501035_0008209
255 Ga0501044_0072282
256 nmdc:mga05p37_25895_c1
257 nmdc:mga05p37_26121_c1
258 nmdc:mga05p37_33700_c1
259 nmdc:mga06r32_48175_c1
260 nmdc:mga08y16_21009_c1
261 nmdc:mga0a205_11050_c1
262 Ga0501082_0000087

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02780

Transketolase_C

Transketolase, C-terminal domain

683

805

0.96

PF00676

E1_dh

Dehydrogenase E1 component

171

419

0.9

PF02779

Transket_pyr

Transketolase, pyrimidine binding domain

491

663

0.88

PF00676

E1_dh

Dehydrogenase E1 component

90

171

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1umd-assembly1.cif.gz_D branched-chain 2-oxo acid dehydrogenase (e1) from thermus thermophilus hb8 with 4-methyl-2-oxopentanoate as an intermediate 0.9445 483 801
3duf-assembly2.cif.gz_H snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multi-enzyme complex 0.9408 483 800
1w88-assembly2.cif.gz_F the crystal structure of pyruvate dehydrogenase e1(d180n,e183q) bound to the peripheral subunit binding domain of e2 0.9359 483 800
1olx-assembly1.cif.gz_B-2 roles of his291-alpha and his146-beta' in the reductive acylation reaction catalyzed by human branched-chain alpha-ketoacid dehydrogenase 0.9329 483 803
1w88-assembly2.cif.gz_H the crystal structure of pyruvate dehydrogenase e1(d180n,e183q) bound to the peripheral subunit binding domain of e2 0.9217 483 800
ID Description Score Start End Superfamily
1w85B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.97 675 800 3.40.50.920
af_P9WIS1_221_343_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.965 682 804 3.40.50.920
af_B4FUC1_232_362_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9636 675 802 3.40.50.920
af_P9WIS1_221_343_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9574 682 804 3.40.50.920
1um9D02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9554 679 801 3.40.50.920
ID Description Score Start End GO Terms
AF-A0A7C1DZX5-F1-model_v4 Dehydrogenase 0.9918 695 831 GO:0003824
AF-A0A7C1DZX5-F1-model_v4 Dehydrogenase 0.9847 695 831 GO:0003824
AF-A0A1V6EK92-F1-model_v4 Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) 0.9818 718 831 GO:0004739
AF-A0A6C1PIM0-F1-model_v4 Dehydrogenase 0.9749 224 831 GO:0016624
AF-A0A847AMY7-F1-model_v4 Dehydrogenase 0.9736 222 831 GO:0016624

Map