F149763
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 131 | 51 | 262 | 315 |
Family's Representative Sequence
| Representative Sequence | 3300031727|Ga0316576_10005315|Ga0316576_100053154 |
| Length | 342 |
| Sequence | VPRKSRLDAPGVLHHVIIRGIERRKIFRSDGDRDDFVQRLERLLPETGTSCYGWALLPNHAHFLLRTGDTPLSTLMRRLLTGYAVAFNHRHNRHGQLFQNRYRSIICQEDVYLKELVRYIHLNPLRAGIVGDLSALKAFSYCGHGVLLGQSNRSWQDDTYVLSFFGETGEEARKHYLEFMKAGINQGKRPELVGGGLIRSLGGWQEVKSARVSGQVTEVLAQAHEKLEPSYALKSKGYDLNTVQERVCETFHISPDEIYKKSRKGKTAAARGLYSYWAVRSLGYSLAEVGRVLGMTGQAVGYAVQRGERFATEKKLLLTGETRYSPREVPRSPRTLNKTIHP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 2 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 3 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 4 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 5 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 6 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 7 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 8 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 9 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 10 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 11 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 12 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 13 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 14 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 15 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 16 | 3300038727 | Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 | Metagenome | Unclassified |
| 17 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 18 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 19 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 20 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 21 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 22 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 23 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 24 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 25 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 26 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 27 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 28 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 29 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 30 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 31 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 32 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 33 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 34 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 35 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 36 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 37 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 38 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 39 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 40 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 41 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 42 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 43 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 44 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 45 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 46 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 47 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 48 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 49 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 50 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 51 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 82.44 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 25.95 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0316576_10005315 | 3300031727 | Bacteria | 7847 |
| 2 | Ga0075433_10233335 | 3300006852 | Unclassified | 1634 |
| 3 | Ga0075429_100243035 | 3300006880 | Bacteria | 1576 |
| 4 | Ga0114129_10992546 | 3300009147 | Unclassified | 1058 |
| 5 | Ga0316575_10005715 | 3300031665 | Bacteria | 4442 |
| 6 | Ga0316575_10007404 | 3300031665 | Bacteria | 3975 |
| 7 | Ga0316575_10010547 | 3300031665 | Unclassified | 3399 |
| 8 | Ga0316575_10111358 | 3300031665 | Bacteria | 1117 |
| 9 | Ga0316579_10060466 | 3300031691 | Unclassified | 1782 |
| 10 | Ga0316579_10140475 | 3300031691 | Bacteria | 1164 |
| 11 | Ga0316576_10032354 | 3300031727 | Bacteria | 3716 |
| 12 | Ga0316576_10079565 | 3300031727 | Bacteria | 2430 |
| 13 | Ga0316576_10152497 | 3300031727 | Bacteria | 1741 |
| 14 | Ga0316576_10212940 | 3300031727 | Bacteria | 1454 |
| 15 | Ga0316576_10230246 | 3300031727 | Bacteria | 1393 |
| 16 | Ga0316576_10237696 | 3300031727 | Unclassified | 1369 |
| 17 | Ga0316576_10337622 | 3300031727 | Unclassified | 1122 |
| 18 | Ga0316578_10001828 | 3300031728 | Bacteria | 8956 |
| 19 | Ga0316578_10096390 | 3300031728 | Bacteria | 1771 |
| 20 | Ga0316578_10143234 | 3300031728 | Bacteria | 1440 |
| 21 | Ga0316578_10215862 | 3300031728 | Bacteria | 1154 |
| 22 | Ga0316578_10261398 | 3300031728 | Bacteria | 1038 |
| 23 | Ga0316577_10053786 | 3300031733 | Bacteria | 2247 |
| 24 | Ga0316583_10004396 | 3300032133 | Bacteria | 5027 |
| 25 | Ga0316583_10035351 | 3300032133 | Bacteria | 1773 |
| 26 | Ga0316583_10082544 | 3300032133 | Bacteria | 1122 |
| 27 | Ga0316583_10085223 | 3300032133 | Bacteria | 1103 |
| 28 | Ga0316585_10051844 | 3300032137 | Bacteria | 1318 |
| 29 | Ga0316574_0000633 | 3300035398 | Bacteria | 14724 |
| 30 | Ga0316574_0056656 | 3300035398 | Unclassified | 2452 |
| 31 | Ga0316574_0079713 | 3300035398 | Bacteria | 2077 |
| 32 | Ga0316574_0088036 | 3300035398 | Bacteria | 1977 |
| 33 | Ga0316574_0094334 | 3300035398 | Bacteria | 1911 |
| 34 | Ga0316574_0262182 | 3300035398 | Unclassified | 1103 |
| 35 | Ga0316582_0006184 | 3300036647 | Bacteria | 6253 |
| 36 | Ga0316582_0032696 | 3300036647 | Bacteria | 3190 |
| 37 | Ga0316582_0049002 | 3300036647 | Bacteria | 2672 |
| 38 | Ga0316582_0070816 | 3300036647 | Bacteria | 2257 |
| 39 | Ga0316582_0072949 | 3300036647 | Bacteria | 2226 |
| 40 | Ga0316582_0147505 | 3300036647 | Bacteria | 1589 |
| 41 | Ga0316582_0237697 | 3300036647 | Unclassified | 1247 |
| 42 | Ga0316582_0342884 | 3300036647 | Bacteria | 1028 |
| 43 | Ga0316582_0446828 | 3300036647 | Bacteria | 891 |
| 44 | Ga0316584_0007215 | 3300036712 | Bacteria | 7585 |
| 45 | Ga0316584_0022606 | 3300036712 | Bacteria | 4588 |
| 46 | Ga0316584_0047861 | 3300036712 | Bacteria | 3195 |
| 47 | Ga0316584_0183017 | 3300036712 | Bacteria | 1551 |
| 48 | Ga0316584_0275590 | 3300036712 | Bacteria | 1223 |
| 49 | Ga0316584_0283390 | 3300036712 | Bacteria | 1203 |
| 50 | Ga0400484_02931 | 3300038725 | Unclassified | 2355 |
| 51 | Ga0400490_22743 | 3300038726 | Bacteria | 2061 |
| 52 | Ga0400491_21169 | 3300038727 | Unclassified | 3548 |
| 53 | Ga0400488_10310 | 3300038741 | Unclassified | 1439 |
| 54 | Ga0400488_46299 | 3300038741 | Unclassified | 2774 |
| 55 | Ga0400488_60694 | 3300038741 | Bacteria | 3134 |
| 56 | Ga0400486_08684 | 3300038742 | Bacteria | 2527 |
| 57 | Ga0400483_047492 | 3300039062 | Unclassified | 2751 |
| 58 | Ga0400483_072274 | 3300039062 | Bacteria | 5621 |
| 59 | Ga0400483_099103 | 3300039062 | Bacteria | 1538 |
| 60 | Ga0400483_107580 | 3300039062 | Unclassified | 3131 |
| 61 | Ga0400483_134023 | 3300039062 | Bacteria | 1516 |
| 62 | Ga0400483_151279 | 3300039062 | Bacteria | 1267 |
| 63 | Ga0400483_152019 | 3300039062 | Bacteria | 44527 |
| 64 | Ga0400483_207258 | 3300039062 | Bacteria | 1208 |
| 65 | Ga0400483_264524 | 3300039062 | Unclassified | 1274 |
| 66 | Ga0400489_08162 | 3300039093 | Unclassified | 1547 |
| 67 | Ga0400489_19960 | 3300039093 | Unclassified | 3135 |
| 68 | Ga0400489_28089 | 3300039093 | Bacteria | 1702 |
| 69 | Ga0400489_34862 | 3300039093 | Bacteria | 1317 |
| 70 | Ga0400489_57688 | 3300039093 | Bacteria | 1639 |
| 71 | Ga0400489_70182 | 3300039093 | Bacteria | 7465 |
| 72 | Ga0400489_79974 | 3300039093 | Bacteria | 2764 |
| 73 | Ga0451577_0096488 | 3300042876 | Bacteria | 2640 |
| 74 | Ga0451577_0251289 | 3300042876 | Unclassified | 1600 |
| 75 | Ga0451577_0317313 | 3300042876 | Bacteria | 1413 |
| 76 | Ga0453683_0000160 | 3300044673 | Bacteria | 98289 |
| 77 | Ga0453683_0004206 | 3300044673 | Bacteria | 10292 |
| 78 | Ga0453683_0014859 | 3300044673 | Bacteria | 5053 |
| 79 | Ga0453684_0000594 | 3300044712 | Bacteria | 134181 |
| 80 | Ga0453684_0000861 | 3300044712 | Bacteria | 102147 |
| 81 | Ga0453684_0003010 | 3300044712 | Bacteria | 39194 |
| 82 | Ga0453684_0064343 | 3300044712 | Bacteria | 4686 |
| 83 | Ga0453684_0124744 | 3300044712 | Bacteria | 3102 |
| 84 | Ga0453684_0141220 | 3300044712 | Bacteria | 2875 |
| 85 | Ga0453684_0313667 | 3300044712 | Unclassified | 1778 |
| 86 | Ga0453684_0363067 | 3300044712 | Unclassified | 1630 |
| 87 | Ga0453684_0726717 | 3300044712 | Unclassified | 1077 |
| 88 | Ga0451576_0062923 | 3300045051 | Unclassified | 3868 |
| 89 | Ga0451576_0138713 | 3300045051 | Bacteria | 2536 |
| 90 | Ga0451576_0213918 | 3300045051 | Bacteria | 2013 |
| 91 | Ga0451576_0353432 | 3300045051 | Bacteria | 1539 |
| 92 | Ga0501031_0277506 | 3300049568 | Unclassified | 1087 |
| 93 | Ga0501033_0268858 | 3300049570 | Bacteria | 1205 |
| 94 | Ga0501036_0054513 | 3300049572 | Bacteria | 3387 |
| 95 | Ga0501036_0459564 | 3300049572 | Unclassified | 1060 |
| 96 | Ga0501037_0173180 | 3300049573 | Bacteria | 1533 |
| 97 | Ga0501038_0016667 | 3300049574 | Bacteria | 6659 |
| 98 | Ga0501039_0003836 | 3300049575 | Bacteria | 11289 |
| 99 | Ga0501039_0384758 | 3300049575 | Unclassified | 1102 |
| 100 | Ga0501040_0003318 | 3300049576 | Bacteria | 10407 |
| 101 | Ga0501041_0000315 | 3300049577 | Bacteria | 23642 |
| 102 | Ga0501041_0204863 | 3300049577 | Unclassified | 1237 |
| 103 | Ga0501042_0002390 | 3300049578 | Bacteria | 11506 |
| 104 | Ga0501046_0326951 | 3300049580 | Bacteria | 1116 |
| 105 | Ga0501048_0138127 | 3300049582 | Bacteria | 1722 |
| 106 | Ga0501068_0023207 | 3300049584 | Unclassified | 3634 |
| 107 | Ga0501070_0417020 | 3300049586 | Unclassified | 1085 |
| 108 | Ga0501071_0002449 | 3300049587 | Bacteria | 11267 |
| 109 | Ga0501071_0297301 | 3300049587 | Unclassified | 1223 |
| 110 | Ga0501072_0001964 | 3300049588 | Bacteria | 15322 |
| 111 | Ga0501073_0129237 | 3300049589 | Bacteria | 1751 |
| 112 | Ga0501075_0001780 | 3300049591 | Bacteria | 14178 |
| 113 | Ga0501075_0189530 | 3300049591 | Bacteria | 1568 |
| 114 | Ga0501076_0000549 | 3300049592 | Bacteria | 23984 |
| 115 | Ga0501076_0077914 | 3300049592 | Bacteria | 2659 |
| 116 | Ga0501077_0000628 | 3300049593 | Bacteria | 21396 |
| 117 | Ga0501077_0098222 | 3300049593 | Bacteria | 1856 |
| 118 | Ga0501077_0418196 | 3300049593 | Unclassified | 857 |
| 119 | Ga0501079_0001109 | 3300049741 | Bacteria | 18728 |
| 120 | Ga0501080_0150222 | 3300049742 | Bacteria | 2153 |
| 121 | Ga0501080_0291988 | 3300049742 | Unclassified | 1480 |
| 122 | Ga0501081_0001485 | 3300049743 | Bacteria | 14387 |
| 123 | Ga0501081_0016428 | 3300049743 | Plasmid | 4893 |
| 124 | Ga0501083_0073929 | 3300049744 | Bacteria | 2265 |
| 125 | Ga0501045_0015439 | 3300049824 | Bacteria | 5418 |
| 126 | Ga0501084_0005844 | 3300054114 | Bacteria | 10124 |
| 127 | Ga0501084_0366959 | 3300054114 | Unclassified | 1216 |
| 128 | Ga0501082_0005540 | 3300060353 | Bacteria | 10962 |
| 129 | Ga0501082_0118916 | 3300060353 | Bacteria | 2289 |
| 130 | Ga0530510_0000801 | 3300061734 | Bacteria | 20461 |
| 131 | Ga0530510_0158574 | 3300061734 | Unclassified | 1673 |
| 132 | Ga0316576_10005315 | |||
| 133 | Ga0075433_10233335 | |||
| 134 | Ga0075429_100243035 | |||
| 135 | Ga0114129_10992546 | |||
| 136 | Ga0316575_10005715 | |||
| 137 | Ga0316575_10007404 | |||
| 138 | Ga0316575_10010547 | |||
| 139 | Ga0316575_10111358 | |||
| 140 | Ga0316579_10060466 | |||
| 141 | Ga0316579_10140475 | |||
| 142 | Ga0316576_10032354 | |||
| 143 | Ga0316576_10079565 | |||
| 144 | Ga0316576_10152497 | |||
| 145 | Ga0316576_10212940 | |||
| 146 | Ga0316576_10230246 | |||
| 147 | Ga0316576_10237696 | |||
| 148 | Ga0316576_10337622 | |||
| 149 | Ga0316578_10001828 | |||
| 150 | Ga0316578_10096390 | |||
| 151 | Ga0316578_10143234 | |||
| 152 | Ga0316578_10215862 | |||
| 153 | Ga0316578_10261398 | |||
| 154 | Ga0316577_10053786 | |||
| 155 | Ga0316583_10004396 | |||
| 156 | Ga0316583_10035351 | |||
| 157 | Ga0316583_10082544 | |||
| 158 | Ga0316583_10085223 | |||
| 159 | Ga0316585_10051844 | |||
| 160 | Ga0316574_0000633 | |||
| 161 | Ga0316574_0056656 | |||
| 162 | Ga0316574_0079713 | |||
| 163 | Ga0316574_0088036 | |||
| 164 | Ga0316574_0094334 | |||
| 165 | Ga0316574_0262182 | |||
| 166 | Ga0316582_0006184 | |||
| 167 | Ga0316582_0032696 | |||
| 168 | Ga0316582_0049002 | |||
| 169 | Ga0316582_0070816 | |||
| 170 | Ga0316582_0072949 | |||
| 171 | Ga0316582_0147505 | |||
| 172 | Ga0316582_0237697 | |||
| 173 | Ga0316582_0342884 | |||
| 174 | Ga0316582_0446828 | |||
| 175 | Ga0316584_0007215 | |||
| 176 | Ga0316584_0022606 | |||
| 177 | Ga0316584_0047861 | |||
| 178 | Ga0316584_0183017 | |||
| 179 | Ga0316584_0275590 | |||
| 180 | Ga0316584_0283390 | |||
| 181 | Ga0400484_02931 | |||
| 182 | Ga0400490_22743 | |||
| 183 | Ga0400491_21169 | |||
| 184 | Ga0400488_10310 | |||
| 185 | Ga0400488_46299 | |||
| 186 | Ga0400488_60694 | |||
| 187 | Ga0400486_08684 | |||
| 188 | Ga0400483_047492 | |||
| 189 | Ga0400483_072274 | |||
| 190 | Ga0400483_099103 | |||
| 191 | Ga0400483_107580 | |||
| 192 | Ga0400483_134023 | |||
| 193 | Ga0400483_151279 | |||
| 194 | Ga0400483_152019 | |||
| 195 | Ga0400483_207258 | |||
| 196 | Ga0400483_264524 | |||
| 197 | Ga0400489_08162 | |||
| 198 | Ga0400489_19960 | |||
| 199 | Ga0400489_28089 | |||
| 200 | Ga0400489_34862 | |||
| 201 | Ga0400489_57688 | |||
| 202 | Ga0400489_70182 | |||
| 203 | Ga0400489_79974 | |||
| 204 | Ga0451577_0096488 | |||
| 205 | Ga0451577_0251289 | |||
| 206 | Ga0451577_0317313 | |||
| 207 | Ga0453683_0000160 | |||
| 208 | Ga0453683_0004206 | |||
| 209 | Ga0453683_0014859 | |||
| 210 | Ga0453684_0000594 | |||
| 211 | Ga0453684_0000861 | |||
| 212 | Ga0453684_0003010 | |||
| 213 | Ga0453684_0064343 | |||
| 214 | Ga0453684_0124744 | |||
| 215 | Ga0453684_0141220 | |||
| 216 | Ga0453684_0313667 | |||
| 217 | Ga0453684_0363067 | |||
| 218 | Ga0453684_0726717 | |||
| 219 | Ga0451576_0062923 | |||
| 220 | Ga0451576_0138713 | |||
| 221 | Ga0451576_0213918 | |||
| 222 | Ga0451576_0353432 | |||
| 223 | Ga0501031_0277506 | |||
| 224 | Ga0501033_0268858 | |||
| 225 | Ga0501036_0054513 | |||
| 226 | Ga0501036_0459564 | |||
| 227 | Ga0501037_0173180 | |||
| 228 | Ga0501038_0016667 | |||
| 229 | Ga0501039_0003836 | |||
| 230 | Ga0501039_0384758 | |||
| 231 | Ga0501040_0003318 | |||
| 232 | Ga0501041_0000315 | |||
| 233 | Ga0501041_0204863 | |||
| 234 | Ga0501042_0002390 | |||
| 235 | Ga0501046_0326951 | |||
| 236 | Ga0501048_0138127 | |||
| 237 | Ga0501068_0023207 | |||
| 238 | Ga0501070_0417020 | |||
| 239 | Ga0501071_0002449 | |||
| 240 | Ga0501071_0297301 | |||
| 241 | Ga0501072_0001964 | |||
| 242 | Ga0501073_0129237 | |||
| 243 | Ga0501075_0001780 | |||
| 244 | Ga0501075_0189530 | |||
| 245 | Ga0501076_0000549 | |||
| 246 | Ga0501076_0077914 | |||
| 247 | Ga0501077_0000628 | |||
| 248 | Ga0501077_0098222 | |||
| 249 | Ga0501077_0418196 | |||
| 250 | Ga0501079_0001109 | |||
| 251 | Ga0501080_0150222 | |||
| 252 | Ga0501080_0291988 | |||
| 253 | Ga0501081_0001485 | |||
| 254 | Ga0501081_0016428 | |||
| 255 | Ga0501083_0073929 | |||
| 256 | Ga0501045_0015439 | |||
| 257 | Ga0501084_0005844 | |||
| 258 | Ga0501084_0366959 | |||
| 259 | Ga0501082_0005540 | |||
| 260 | Ga0501082_0118916 | |||
| 261 | Ga0530510_0000801 | |||
| 262 | Ga0530510_0158574 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7bhy-assembly2.cif.gz_C-2 | dna-binding domain of deor in complex with the dna operator | 0.8893 | 281 | 322 |
| 4go1-assembly1.cif.gz_B-2 | crystal structure of full length transcription repressor lsrr from e. coli. | 0.8538 | 278 | 323 |
| 1j1v-assembly1.cif.gz_A | crystal structure of dnaa domainiv complexed with dnaabox dna | 0.8501 | 253 | 322 |
| 2a6m-assembly2.cif.gz_A-2 | crystal structure of the ishp608 transposase | 0.8241 | 16 | 114 |
| 3pvv-assembly2.cif.gz_B | structure of mycobacterium tuberculosis dnaa-dbd in complex with box1 dna | 0.8199 | 253 | 322 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3vfzB00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9385 | 284 | 322 | 1.10.10.10 |
| 2o8xB00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9059 | 284 | 322 | 1.10.10.10 |
| af_Q94K49_1_182_1.10.472.10 | Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Cyclin-like | 0.8731 | 283 | 322 | 1.10.472.10 |
| af_Q54TK5_1_79_1.10.472.10 | Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Cyclin-like | 0.8597 | 284 | 322 | 1.10.472.10 |
| 4go1B01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.8538 | 278 | 323 | 1.10.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A831XVW5-F1-model_v4 | Transposase IS200-like domain-containing protein | 0.9829 | 19 | 164 |
GO:0003677
GO:0004803 GO:0006313 |
| AF-A0A7V1BW83-F1-model_v4 | Transposase | 0.9649 | 6 | 129 |
GO:0003677
GO:0004803 GO:0006313 |
| AF-A0A7C1S8Z4-F1-model_v4 | Transposase | 0.9643 | 23 | 127 |
GO:0003677
GO:0004803 GO:0006313 |
| AF-A0A101HZK1-F1-model_v4 | Chromosomal replication initiator DnaA domain protein | 0.9642 | 13 | 97 |
GO:0003677
GO:0004803 GO:0006313 |
| AF-A0A6J4WXH0-F1-model_v4 | Transposase IS200-like domain-containing protein | 0.9603 | 6 | 142 |
GO:0003677
GO:0004803 GO:0006313 |