F149712

General Info

Members Datasets Scaffolds Average Seq Length
131 66 263 433

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10000023|Ga0265327_10000023197
Length 468
Sequence MNPCPSVESVAKNFPDYASVTEYLYALKAGGVKFGIDRMRRLADALGHPERGYPVIHVAGTNGKGSVSAMLDAIFHAAGWRTGLYTSPHLVKLGERVQVDRRLLTEAEIVAYTNELRPVAAACAAAMPDEHATFFEFMTAMAFLQFQRRQVDVAVVEVGMGGRLDATNVVEPALAVITSIGLDHCAELGGTVELIAREKAGIIKPGRPVVIGRLPPGAERVIREIAAERGAPVHSVREVFGEDVSGYPSTNLAGDYQRWNAGTATLAARVFAETCRAGAGRHAGSTLPDGMATSASPTRGRPPDDAAIAAGLRRVNWPGRWQRTTIGDRPLILDASHNPEGAAVLDQNLRELVAATGRPPVVVAGALGEFRARALLEVVLRHAGEVHLVTPRQARACAFEELLALVPAAQRPRVHRGTIEAIFPDAHTCTVGGPADTVVVTGSIYVLGEVLERIEPGRGGGEGKLQDF

Samples

Sample ID Description Type Environment
1 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
13 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
14 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
21 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
22 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
23 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
24 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
25 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
26 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
27 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
28 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
29 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
30 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
31 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
32 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
33 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
34 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
35 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
36 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
37 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
38 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
39 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
40 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
41 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
42 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
43 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
44 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
45 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
46 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
47 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
48 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
49 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
50 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
51 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
52 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
53 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
54 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
55 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
62 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
63 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
66 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.24
Metatranscriptomes 0
Isolates 0.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 94.66
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265327_10000023 3300031251 Bacteria 382703
2 rootH1_10063340 3300003316 Bacteria 2199
3 rootH1_10063340 3300003323 Bacteria 3836
4 rootH2_10060179 3300003320 Bacteria 7146
5 rootL2_10012957 3300003322 Bacteria 12025
6 rootH1_10054790 3300003323 Bacteria 8810
7 Ga0070683_100015937 3300005329 Bacteria 6611
8 Ga0068869_100000077 3300005334 Bacteria 44272
9 Ga0068868_100032830 3300005338 Bacteria 3995
10 Ga0068868_100097820 3300005338 Bacteria 2372
11 Ga0068857_100054580 3300005577 Bacteria 3546
12 Ga0068856_100084919 3300005614 Bacteria 3145
13 Ga0070717_10000091 3300006028 Bacteria 70818
14 Ga0068871_100002815 3300006358 Bacteria 11902
15 Ga0068865_100002945 3300006881 Bacteria 10153
16 Ga0207700_10019792 3300025928 Bacteria 4553
17 Ga0207689_10000023 3300025942 Bacteria 107806
18 Ga0207661_10007222 3300025944 Bacteria 7897
19 Ga0207677_10060055 3300026023 Bacteria 2626
20 Ga0207677_10085088 3300026023 Bacteria 2281
21 Ga0207702_10010467 3300026078 Bacteria 7758
22 Ga0207674_10092672 3300026116 Bacteria 3011
23 Ga0265337_1001559 3300028556 Bacteria 11226
24 Ga0265337_1005268 3300028556 Bacteria 5166
25 Ga0265337_1012922 3300028556 Bacteria 2820
26 Ga0265319_1000032 3300028563 Bacteria 119321
27 Ga0265319_1001207 3300028563 Bacteria 15941
28 Ga0265319_1001340 3300028563 Bacteria 14851
29 Ga0265319_1002447 3300028563 Bacteria 10145
30 Ga0265319_1005379 3300028563 Bacteria 6133
31 Ga0265319_1005923 3300028563 Bacteria 5749
32 Ga0265319_1028308 3300028563 Bacteria 1977
33 Ga0265319_1034969 3300028563 Bacteria 1726
34 Ga0265334_10007838 3300028573 Bacteria 4570
35 Ga0265318_10000007 3300028577 Bacteria 280699
36 Ga0265318_10000950 3300028577 Bacteria 18624
37 Ga0265318_10001564 3300028577 Bacteria 13294
38 Ga0265318_10005515 3300028577 Bacteria 5936
39 Ga0265318_10006407 3300028577 Bacteria 5419
40 Ga0265318_10030699 3300028577 Bacteria 2089
41 Ga0265323_10000078 3300028653 Bacteria 54941
42 Ga0265323_10002121 3300028653 Bacteria 9246
43 Ga0265323_10002198 3300028653 Bacteria 9085
44 Ga0265323_10004043 3300028653 Bacteria 6357
45 Ga0265323_10004439 3300028653 Bacteria 6047
46 Ga0265322_10022858 3300028654 Bacteria 1788
47 Ga0265336_10008359 3300028666 Bacteria 3634
48 Ga0307515_10240524 3300028794 Bacteria 1582
49 Ga0265338_10003743 3300028800 Bacteria 21131
50 Ga0265338_10013512 3300028800 Bacteria 9206
51 Ga0265324_10011426 3300029957 Bacteria 3382
52 Ga0265330_10022929 3300031235 Bacteria 2837
53 Ga0265332_10015126 3300031238 Bacteria 3409
54 Ga0265332_10057489 3300031238 Bacteria 1666
55 Ga0265320_10001856 3300031240 Bacteria 14984
56 Ga0265320_10003183 3300031240 Bacteria 11132
57 Ga0265320_10006245 3300031240 Bacteria 7529
58 Ga0265320_10008981 3300031240 Bacteria 6064
59 Ga0265320_10009136 3300031240 Bacteria 6002
60 Ga0265320_10010614 3300031240 Bacteria 5468
61 Ga0265320_10011314 3300031240 Bacteria 5256
62 Ga0265320_10017914 3300031240 Bacteria 3915
63 Ga0265320_10024033 3300031240 Bacteria 3231
64 Ga0265325_10023997 3300031241 Bacteria 3320
65 Ga0265331_10004831 3300031250 Bacteria 8299
66 Ga0265331_10008941 3300031250 Bacteria 5661
67 Ga0265331_10019779 3300031250 Bacteria 3469
68 Ga0265327_10001907 3300031251 Bacteria 24075
69 Ga0265327_10005462 3300031251 Bacteria 10603
70 Ga0265316_10003097 3300031344 Bacteria 16948
71 Ga0265316_10021574 3300031344 Bacteria 5450
72 Ga0265316_10022022 3300031344 Bacteria 5384
73 Ga0265316_10031232 3300031344 Bacteria 4358
74 Ga0265316_10045960 3300031344 Bacteria 3463
75 Ga0265316_10090296 3300031344 Bacteria 2337
76 Ga0307408_100000032 3300031548 Bacteria 213693
77 Ga0265313_10003378 3300031595 Bacteria 12983
78 Ga0265313_10003932 3300031595 Bacteria 11696
79 Ga0265313_10004675 3300031595 Bacteria 10343
80 Ga0265313_10019084 3300031595 Bacteria 3831
81 Ga0265313_10052606 3300031595 Bacteria 1942
82 Ga0307508_10000283 3300031616 Bacteria 62443
83 Ga0265314_10001576 3300031711 Bacteria 25071
84 Ga0265314_10001800 3300031711 Bacteria 23116
85 Ga0265314_10002302 3300031711 Bacteria 19739
86 Ga0265314_10127265 3300031711 Bacteria 1593
87 Ga0265342_10001924 3300031712 Bacteria 18650
88 Ga0265342_10053670 3300031712 Bacteria 2398
89 Ga0265342_10054045 3300031712 Bacteria 2388
90 Ga0265342_10065801 3300031712 Bacteria 2123
91 Ga0307410_10000015 3300031852 Bacteria 73395
92 Ga0307407_10003577 3300031903 Bacteria 6417
93 Ga0307412_10057900 3300031911 Bacteria 2589
94 Ga0307409_100000111 3300031995 Bacteria 30018
95 Ga0307416_100000038 3300032002 Bacteria 136704
96 Ga0373928_0002189 3300035084 Bacteria 3808
97 Ga0395905_0000036 3300037471 Bacteria 271733
98 Ga0451577_0000012 3300042876 Bacteria 575467
99 Ga0451577_0312612 3300042876 Bacteria 1424
100 Ga0453684_0000001 3300044712 Bacteria 2623166
101 Ga0453684_0115696 3300044712 Bacteria 3249
102 Ga0451576_0000071 3300045051 Bacteria 258795
103 Ga0451576_0000878 3300045051 Bacteria 57500
104 Ga0451576_0026257 3300045051 Bacteria 6265
105 Ga0451576_0041239 3300045051 Bacteria 4882
106 Ga0466967_0004408 3300045976 Bacteria 9484
107 Ga0501031_0013607 3300049568 Bacteria 5302
108 Ga0501032_0020362 3300049569 Bacteria 4620
109 Ga0501033_0001883 3300049570 Bacteria 18253
110 Ga0501033_0048735 3300049570 Bacteria 3146
111 Ga0501034_0071349 3300049571 Bacteria 3483
112 Ga0501034_0125456 3300049571 Bacteria 2552
113 Ga0501037_0115363 3300049573 Bacteria 1933
114 Ga0501038_0006924 3300049574 Bacteria 10466
115 Ga0501043_0027330 3300049579 Bacteria 4479
116 Ga0501046_0002232 3300049580 Bacteria 18276
117 Ga0501046_0017583 3300049580 Bacteria 5963
118 Ga0501046_0084667 3300049580 Bacteria 2445
119 Ga0501047_0020894 3300049581 Bacteria 6288
120 Ga0501047_0024691 3300049581 Bacteria 5771
121 Ga0501047_0073560 3300049581 Bacteria 3290
122 Ga0501243_001221 3300049675 Bacteria 3682
123 Ga0501083_0000965 3300049744 Bacteria 19030
124 Ga0501083_0003782 3300049744 Bacteria 10629
125 Ga0501035_0000394 3300049822 Bacteria 49952
126 Ga0501035_0014340 3300049822 Bacteria 7316
127 Ga0501035_0032592 3300049822 Bacteria 4739
128 Ga0501044_0000204 3300049823 Bacteria 75175
129 Ga0501044_0003572 3300049823 Bacteria 17498
130 Ga0501044_0004884 3300049823 Bacteria 14984
131 Ga0501045_0198533 3300049824 Bacteria 1495
132 2788434897 2786546940 Bacteria 6396474
133 Ga0265327_10000023
134 rootH1_10063340
135 rootH2_10060179
136 rootL2_10012957
137 rootH1_10054790
138 Ga0070683_100015937
139 Ga0068869_100000077
140 Ga0068868_100032830
141 Ga0068868_100097820
142 Ga0068857_100054580
143 Ga0068856_100084919
144 Ga0070717_10000091
145 Ga0068871_100002815
146 Ga0068865_100002945
147 Ga0207700_10019792
148 Ga0207689_10000023
149 Ga0207661_10007222
150 Ga0207677_10060055
151 Ga0207677_10085088
152 Ga0207702_10010467
153 Ga0207674_10092672
154 Ga0265337_1001559
155 Ga0265337_1005268
156 Ga0265337_1012922
157 Ga0265319_1000032
158 Ga0265319_1001207
159 Ga0265319_1001340
160 Ga0265319_1002447
161 Ga0265319_1005379
162 Ga0265319_1005923
163 Ga0265319_1028308
164 Ga0265319_1034969
165 Ga0265334_10007838
166 Ga0265318_10000007
167 Ga0265318_10000950
168 Ga0265318_10001564
169 Ga0265318_10005515
170 Ga0265318_10006407
171 Ga0265318_10030699
172 Ga0265323_10000078
173 Ga0265323_10002121
174 Ga0265323_10002198
175 Ga0265323_10004043
176 Ga0265323_10004439
177 Ga0265322_10022858
178 Ga0265336_10008359
179 Ga0307515_10240524
180 Ga0265338_10003743
181 Ga0265338_10013512
182 Ga0265324_10011426
183 Ga0265330_10022929
184 Ga0265332_10015126
185 Ga0265332_10057489
186 Ga0265320_10001856
187 Ga0265320_10003183
188 Ga0265320_10006245
189 Ga0265320_10008981
190 Ga0265320_10009136
191 Ga0265320_10010614
192 Ga0265320_10011314
193 Ga0265320_10017914
194 Ga0265320_10024033
195 Ga0265325_10023997
196 Ga0265331_10004831
197 Ga0265331_10008941
198 Ga0265331_10019779
199 Ga0265327_10001907
200 Ga0265327_10005462
201 Ga0265316_10003097
202 Ga0265316_10021574
203 Ga0265316_10022022
204 Ga0265316_10031232
205 Ga0265316_10045960
206 Ga0265316_10090296
207 Ga0307408_100000032
208 Ga0265313_10003378
209 Ga0265313_10003932
210 Ga0265313_10004675
211 Ga0265313_10019084
212 Ga0265313_10052606
213 Ga0307508_10000283
214 Ga0265314_10001576
215 Ga0265314_10001800
216 Ga0265314_10002302
217 Ga0265314_10127265
218 Ga0265342_10001924
219 Ga0265342_10053670
220 Ga0265342_10054045
221 Ga0265342_10065801
222 Ga0307410_10000015
223 Ga0307407_10003577
224 Ga0307412_10057900
225 Ga0307409_100000111
226 Ga0307416_100000038
227 Ga0373928_0002189
228 Ga0395905_0000036
229 Ga0451577_0000012
230 Ga0451577_0312612
231 Ga0453684_0000001
232 Ga0453684_0115696
233 Ga0451576_0000071
234 Ga0451576_0000878
235 Ga0451576_0026257
236 Ga0451576_0041239
237 Ga0466967_0004408
238 Ga0501031_0013607
239 Ga0501032_0020362
240 Ga0501033_0001883
241 Ga0501033_0048735
242 Ga0501034_0071349
243 Ga0501034_0125456
244 Ga0501037_0115363
245 Ga0501038_0006924
246 Ga0501043_0027330
247 Ga0501046_0002232
248 Ga0501046_0017583
249 Ga0501046_0084667
250 Ga0501047_0020894
251 Ga0501047_0024691
252 Ga0501047_0073560
253 Ga0501243_001221
254 Ga0501083_0000965
255 Ga0501083_0003782
256 Ga0501035_0000394
257 Ga0501035_0014340
258 Ga0501035_0032592
259 Ga0501044_0000204
260 Ga0501044_0003572
261 Ga0501044_0004884
262 Ga0501045_0198533
263 2788434897

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08245

Mur_ligase_M

Mur ligase middle domain

58

236

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1w7k-assembly1.cif.gz_A e.coli folc in complex with adp, without folate substrate 0.872 3 429
1w78-assembly1.cif.gz_A e.coli folc in complex with dhpp and adp 0.8653 3 430
3n2a-assembly1.cif.gz_A crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase from yersinia pestis co92 0.865 3 425
3qcz-assembly1.cif.gz_A crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase with mn, amppnp and l-glutamate bound 0.8635 3 425
3pyz-assembly1.cif.gz_A crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase complexed with amppnp and mn ion from yersinia pestis c092 0.8631 3 425
ID Description Score Start End Superfamily
af_Q8IE69_45_322_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9095 3 297 3.40.1190.10
af_Q9UTD0_1_272_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8871 20 289 3.40.1190.10
af_F1Q7N0_41_326_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8827 4 260 3.40.1190.10
af_Q9UTD0_1_272_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8777 20 289 3.40.1190.10
1o5zA01 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8738 5 288 3.40.1190.10
ID Description Score Start End GO Terms
AF-X1RF56-F1-model_v4 Mur ligase central domain-containing protein 0.9848 140 224 GO:0004326
GO:0005524
GO:0005737
GO:0008841
AF-A0A6G3XVQ7-F1-model_v4 Dihydrofolate synthase 0.9767 156 224 GO:0004326
GO:0005524
GO:0005737
GO:0008841
AF-A0A6P9AWN0-F1-model_v4 Folylpolyglutamate synthase, mitochondrial 0.9681 121 224 GO:0004326
GO:0005524
GO:0005739
GO:0005829
AF-A0A6V8PPJ8-F1-model_v4 Dihydrofolate synthase / folylpolyglutamate synthase 0.9662 25 193 GO:0004326
GO:0005524
GO:0005737
GO:0008841
AF-A0A3B8XK06-F1-model_v4 Mur ligase central domain-containing protein 0.9652 4 180 GO:0004326
GO:0005524
GO:0005737
GO:0008841

Map