F149246

General Info

Members Datasets Scaffolds Average Seq Length
131 98 127 833

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10000617|Ga0157372_100006172
Length 920
Sequence MIHLTQLIYIKPGKEAEFDSFEAVALPLIARYNGRLLMRVRPDASAFIEGEEELPYEIHLVSFPTEEDFVNFGKDPERVAALHLKEASVERIVLIKGIRLLLLVLLFPLLLFANLNPPRTITIRNAHLNLTLETGEWACIRSMTVNGQTVLNAADGGYTSVTVGGKTYSSLRLLAAPSVVQRNDSVIVDGIRYGDQKAPIRERWVFITSNAAIRWKIERTLPVATKTDGSATPVLQFNSVATWDGAYQGYGGLAWFYLFNEKLCTYGVHTRLSSFWNRKTGNGLDVTVEAPGKQVAMRYTRTNDDRLAYGVTVSDAPMLPRYDSGTHRRRFIRGKTDVWASFDQPAGKSMETIVLGYFNVNDRYGRGHFVGIDGSRVSAVLNTIARIGVIDSLHFGGNSWHTPYGPICLHEQYIAQLGLGIDDPHYLKGYQSCLDFYRDHAIRPDGRVIPRWAYTDEDMMPGQNTPEGFYEAQWGFLLDSNPDLVTNVSDLYDQTGDLRWVRTHQASCEKALDWILARDSDGDGLVEMMTDNEHAKRGSDWIDIVWASYENAFVNAKLYHALIKWADIERQLNDPAKAGYYEAAAAKLRVSFNKPTREGGFWDEENRCYVHWLDKDGSVHGRNRVTPVNFMAIAYGICDDAVRSHHILDTIETQMQQENLFFWPLCMTSYAPGEGNDWQWPFPNYENGDLFLSWGSVAARAYADYRPEVAIRYIRKVLDQYGKDGLAFQRYGRQKQDGRGDDILSGNSLSIVGLYQAIYGVNPLYNRFYLEPHITPELAGTELNYYFRGRKLKVRLDRGRYTVADRTFSISAATAFGFFHTGDTLQYFSGADATPALQAISKDSLKWEIGEWKKGEREWKQAAAGAVEYISRGLEPRVEYSLFRNGKLLKKIKSDRKGQLRFRLEAYFLHSFCDLRLRVE

Samples

Sample ID Description Type Environment
1 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
2 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
3 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
40 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
41 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
43 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
44 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
46 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
69 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
70 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
78 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
79 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
80 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
81 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
82 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
83 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
84 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
85 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
90 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
91 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
92 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
93 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
94 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
95 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
96 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
97 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
98 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.95
Metatranscriptomes 0
Isolates 3.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.85
Nodule 0
Rhizoplane 0
Rhizosphere 70.23
Stem 0
Stem Tuber 0
Unclassified 9.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000518 3300001979 Bacteria 16597
2 JGI25154J39366_1000040 3300002738 Bacteria 147410
3 JGI25165J46597_1001772 3300003214 Bacteria 9365
4 JGI25153J46596_10000841 3300003215 Bacteria 18779
5 rootH1_10117125 3300003316 Bacteria 4247
6 rootH2_10008600 3300003320 Bacteria 44340
7 rootH2_10009372 3300003320 Bacteria 36656
8 rootH2_10044770 3300003320 Bacteria 33117
9 JGI25160J50197_1004046 3300003354 Bacteria 6396
10 Ga0055531_10000085 3300003794 Bacteria 102372
11 Ga0070676_10002356 3300005328 Bacteria 9668
12 Ga0070670_100004868 3300005331 Bacteria 11294
13 Ga0070666_10028440 3300005335 Unclassified 3668
14 Ga0070660_100043125 3300005339 Bacteria 3446
15 Ga0070678_100004523 3300005456 Bacteria 7894
16 Ga0070685_10016444 3300005466 Bacteria 3942
17 Ga0070679_100016368 3300005530 Bacteria 7151
18 Ga0070679_100067873 3300005530 Bacteria 3557
19 Ga0070679_100087841 3300005530 Bacteria 3096
20 Ga0068853_100002397 3300005539 Bacteria 14013
21 Ga0070665_100000001 3300005548 Bacteria 1083363
22 Ga0070665_100000234 3300005548 Bacteria 91915
23 Ga0068855_100000014 3300005563 Bacteria 232720
24 Ga0068855_100007588 3300005563 Bacteria 13122
25 Ga0068855_100013467 3300005563 Bacteria 9858
26 Ga0068855_100020923 3300005563 Bacteria 7845
27 Ga0068859_100019574 3300005617 Bacteria 6800
28 Ga0068860_100000097 3300005843 Bacteria 146573
29 Ga0097621_100000394 3300006237 Bacteria 30453
30 Ga0068871_100001064 3300006358 Bacteria 18418
31 Ga0068871_100026981 3300006358 Bacteria 4487
32 Ga0068865_100000219 3300006881 Bacteria 31881
33 Ga0097620_100019574 3300006931 Bacteria 6800
34 Ga0105240_10001686 3300009093 Bacteria 37429
35 Ga0105240_10060347 3300009093 Bacteria 4728
36 Ga0105237_10000503 3300009545 Bacteria 55383
37 Ga0105237_10009349 3300009545 Bacteria 10497
38 Ga0105237_10044146 3300009545 Bacteria 4488
39 Ga0105239_10000643 3300010375 Bacteria 49700
40 Ga0105239_10004198 3300010375 Bacteria 17304
41 Ga0105239_10006531 3300010375 Bacteria 13509
42 Ga0157373_10016036 3300013100 Bacteria 5468
43 Ga0157371_10005643 3300013102 Bacteria 10505
44 Ga0157371_10014309 3300013102 Bacteria 5992
45 Ga0157370_10007779 3300013104 Bacteria 11620
46 Ga0157369_10048788 3300013105 Bacteria 4593
47 Ga0157374_10000002 3300013296 Bacteria 1054226
48 Ga0163162_10000041 3300013306 Bacteria 132375
49 Ga0163162_10001127 3300013306 Bacteria 24862
50 Ga0157372_10000617 3300013307 Bacteria 38817
51 Ga0157372_10003151 3300013307 Bacteria 17789
52 Ga0157372_10079115 3300013307 Unclassified 3717
53 Ga0157372_10107967 3300013307 Bacteria 3185
54 Ga0157376_10003996 3300014969 Bacteria 10195
55 Ga0207427_100113 3300025231 Bacteria 107320
56 Ga0209437_100010 3300025233 Bacteria 838447
57 Ga0209258_100156 3300025242 Bacteria 156926
58 Ga0209646_1000002 3300025246 Bacteria 1425781
59 Ga0209026_1000429 3300025250 Bacteria 35110
60 Ga0209148_1000427 3300025254 Bacteria 46722
61 Ga0209233_1000017 3300025261 Bacteria 898076
62 Ga0209455_1004249 3300025272 Bacteria 4764
63 Ga0209050_1000969 3300025298 Bacteria 36769
64 Ga0207426_1000518 3300025302 Bacteria 56268
65 Ga0209257_1000001 3300025304 Bacteria 2274655
66 Ga0207647_10001102 3300025904 Bacteria 20838
67 Ga0207645_10002596 3300025907 Bacteria 14091
68 Ga0207707_10036276 3300025912 Bacteria 4312
69 Ga0207695_10000048 3300025913 Bacteria 421800
70 Ga0207695_10010467 3300025913 Bacteria 11343
71 Ga0207671_10001992 3300025914 Bacteria 22504
72 Ga0207671_10002527 3300025914 Bacteria 19488
73 Ga0207671_10017077 3300025914 Bacteria 5611
74 Ga0207660_10002010 3300025917 Bacteria 13524
75 Ga0207657_10012338 3300025919 Bacteria 8439
76 Ga0207657_10031409 3300025919 Unclassified 4811
77 Ga0207690_10017924 3300025932 Bacteria 4334
78 Ga0207704_10000113 3300025938 Bacteria 44819
79 Ga0207667_10000049 3300025949 Bacteria 235027
80 Ga0207667_10000355 3300025949 Bacteria 62384
81 Ga0207667_10013804 3300025949 Bacteria 9229
82 Ga0207667_10017811 3300025949 Bacteria 7986
83 Ga0207639_10009170 3300026041 Bacteria 6821
84 Ga0207648_10002173 3300026089 Bacteria 21296
85 Ga0207683_10064110 3300026121 Bacteria 3238
86 Ga0207698_10007415 3300026142 Bacteria 6871
87 Ga0268266_10000038 3300028379 Bacteria 325729
88 Ga0268266_10000244 3300028379 Bacteria 91958
89 Ga0268264_10000167 3300028381 Bacteria 146190
90 Ga0268264_10001952 3300028381 Bacteria 18525
91 Ga0307515_10007801 3300028794 Bacteria 21063
92 Ga0265327_10000191 3300031251 Bacteria 130083
93 Ga0307516_10001138 3300031730 Bacteria 37091
94 Ga0307507_10000225 3300033179 Bacteria 107651
95 Ga0307510_10003645 3300033180 Bacteria 17974
96 Ga0395899_0007414 3300037312 Bacteria 8476
97 Ga0395900_0032130 3300037418 Bacteria 5395
98 Ga0395898_0023096 3300037466 Bacteria 6289
99 Ga0395901_0124198 3300038443 Bacteria 2712
100 Ga0453684_0011027 3300044712 Bacteria 15266
101 Ga0451576_0032848 3300045051 Bacteria 5518
102 Ga0495638_0000008 3300046460 Bacteria 565643
103 Ga0495585_0000111 3300046492 Bacteria 87559
104 Ga0495631_0001819 3300046518 Bacteria 12602
105 Ga0495648_0007683 3300046524 Bacteria 8594
106 Ga0495648_0021079 3300046524 Bacteria 4524
107 Ga0495668_0000011 3300046616 Bacteria 472186
108 Ga0495611_0000199 3300046648 Bacteria 42046
109 Ga0495625_0001438 3300046660 Bacteria 28970
110 Ga0495687_000001 3300047443 Bacteria 1215582
111 Ga0495686_0000098 3300047472 Bacteria 183131
112 Ga0501034_0025157 3300049571 Bacteria 6059
113 Ga0501043_0026045 3300049579 Unclassified 4589
114 Ga0501070_0070657 3300049586 Bacteria 2891
115 Ga0500578_0000018 3300053086 Bacteria 172537
116 Ga0500644_0000017 3300053088 Bacteria 106518
117 Ga0500583_0000118 3300053092 Bacteria 38092
118 Ga0500583_0000529 3300053092 Bacteria 11609
119 Ga0500607_010754 3300053121 Bacteria 5432
120 Ga0500608_001216 3300053122 Bacteria 9204
121 Ga0500652_003483 3300053131 Bacteria 4778
122 Ga0500616_0000003 3300053153 Bacteria 1220687
123 Ga0500616_0006794 3300053153 Bacteria 7410
124 Ga0500622_0000024 3300053156 Bacteria 249623
125 Ga0500622_0000027 3300053156 Bacteria 232414
126 Ga0500622_0000979 3300053156 Bacteria 24232
127 Ga0500634_0026194 3300053161 Bacteria 3176

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0070657 Ga0501070_0070657_25_2259 742
2 3300038443 Ga0395901_0124198 Ga0395901_0124198_342_2687 764
3 3300013102 Ga0157371_10014309 Ga0157371_100143094 778
4 3300013307 Ga0157372_10107967 Ga0157372_101079673 778
5 3300028794 Ga0307515_10007801 Ga0307515_100078012 790
6 3300003320 rootH2_10008600 rootH2_1000860019 791
7 3300049579 Ga0501043_0026045 Ga0501043_0026045_99_2516 793
8 3300031730 Ga0307516_10001138 Ga0307516_1000113823 800
9 3300046524 Ga0495648_0021079 Ga0495648_0021079_1911_4409 802
10 3300053092 Ga0500583_0000529 Ga0500583_0000529_5367_7865 802
11 3300053156 Ga0500622_0000979 Ga0500622_0000979_19115_21613 802
12 3300031251 Ga0265327_10000191 Ga0265327_1000019148 805
13 3300045051 Ga0451576_0032848 Ga0451576_0032848_2196_4706 805
14 3300053153 Ga0500616_0000003 Ga0500616_0000003_63099_65549 806
15 3300025242 Ga0209258_100156 Ga0209258_10015642 807
16 3300025254 Ga0209148_1000427 Ga0209148_100042729 807
17 3300053088 Ga0500644_0000017 Ga0500644_0000017_81621_84074 809
18 3300053121 Ga0500607_010754 Ga0500607_010754_348_2801 809
19 3300053161 Ga0500634_0026194 Ga0500634_0026194_290_2743 809
20 3300013296 Ga0157374_10000002 Ga0157374_10000002567 811
21 3300014969 Ga0157376_10003996 Ga0157376_100039967 811
22 3300005548 Ga0070665_100000001 Ga0070665_100000001528 812
23 3300028379 Ga0268266_10000038 Ga0268266_10000038112 812
24 3300046648 Ga0495611_0000199 Ga0495611_0000199_34789_37317 812
25 3300005530 Ga0070679_100067873 Ga0070679_1000678733 813
26 3300005563 Ga0068855_100013467 Ga0068855_1000134673 813
27 3300013102 Ga0157371_10005643 Ga0157371_100056437 813
28 3300013104 Ga0157370_10007779 Ga0157370_100077793 813
29 3300013307 Ga0157372_10003151 Ga0157372_100031518 813
30 3300025932 Ga0207690_10017924 Ga0207690_100179242 813
31 3300025949 Ga0207667_10013804 Ga0207667_100138047 813
32 3300037312 Ga0395899_0007414 Ga0395899_0007414_4863_7355 813
33 3300037418 Ga0395900_0032130 Ga0395900_0032130_2462_4954 813
34 3300037466 Ga0395898_0023096 Ga0395898_0023096_2676_5168 813
35 3300053156 Ga0500622_0000027 Ga0500622_0000027_98153_100735 813
36 3300049571 Ga0501034_0025157 Ga0501034_0025157_835_3315 814
37 3300003320 rootH2_10044770 rootH2_1004477026 815
38 3300005843 Ga0068860_100000097 Ga0068860_10000009796 818
39 3300013306 Ga0163162_10001127 Ga0163162_1000112711 818
40 3300028381 Ga0268264_10000167 Ga0268264_1000016755 818
41 3300044712 Ga0453684_0011027 Ga0453684_0011027_12701_15199 818
42 3300047443 Ga0495687_000001 Ga0495687_000001_585189_587687 818
43 3300009545 Ga0105237_10044146 Ga0105237_100441461 819
44 3300025272 Ga0209455_1004249 Ga0209455_10042493 819
45 3300025914 Ga0207671_10017077 Ga0207671_100170773 819
46 3300053153 Ga0500616_0006794 Ga0500616_0006794_2722_5208 819
47 3300005530 Ga0070679_100016368 Ga0070679_1000163682 822
48 3300005563 Ga0068855_100000014 Ga0068855_100000014108 822
49 3300025949 Ga0207667_10000049 Ga0207667_10000049106 822
50 3300025949 Ga0207667_10000355 Ga0207667_1000035538 823
51 3300033180 Ga0307510_10003645 Ga0307510_1000364510 823
52 3300046492 Ga0495585_0000111 Ga0495585_0000111_30310_32787 823
53 3300046518 Ga0495631_0001819 Ga0495631_0001819_2982_5456 823
54 3300046616 Ga0495668_0000011 Ga0495668_0000011_233823_236300 823
55 3300046660 Ga0495625_0001438 Ga0495625_0001438_4208_6685 823
56 3300053122 Ga0500608_001216 Ga0500608_001216_2696_5170 823
57 3300005563 Ga0068855_100020923 Ga0068855_1000209233 826
58 3300006358 Ga0068871_100026981 Ga0068871_1000269812 826
59 3300009093 Ga0105240_10060347 Ga0105240_100603472 826
60 3300010375 Ga0105239_10006531 Ga0105239_100065312 826
61 3300013307 Ga0157372_10000617 Ga0157372_100006172 826
62 3300025298 Ga0209050_1000969 Ga0209050_100096913 826
63 3300046460 Ga0495638_0000008 Ga0495638_0000008_498508_501036 826
64 3300053092 Ga0500583_0000118 Ga0500583_0000118_22082_24616 826
65 3300003214 JGI25165J46597_1001772 JGI25165J46597_10017727 827
66 3300003794 Ga0055531_10000085 Ga0055531_1000008543 827
67 3300005335 Ga0070666_10028440 Ga0070666_100284402 827
68 3300009545 Ga0105237_10000503 Ga0105237_100005037 827
69 3300010375 Ga0105239_10000643 Ga0105239_1000064343 827
70 3300025231 Ga0207427_100113 Ga0207427_10011378 827
71 3300025233 Ga0209437_100010 Ga0209437_100010696 827
72 3300025261 Ga0209233_1000017 Ga0209233_1000017709 827
73 3300025304 Ga0209257_1000001 Ga0209257_10000011209 827
74 3300025904 Ga0207647_10001102 Ga0207647_1000110217 827
75 3300025912 Ga0207707_10036276 Ga0207707_100362761 827
76 3300025914 Ga0207671_10001992 Ga0207671_100019927 827
77 3300025919 Ga0207657_10012338 Ga0207657_100123387 827
78 3300026142 Ga0207698_10007415 Ga0207698_100074152 827
79 3300053086 Ga0500578_0000018 Ga0500578_0000018_4540_7095 827
80 iso_pu_bacteria 2852623160 2852624325 827
81 iso_pu_bacteria 2884933994 2884936727 827
82 3300003316 rootH1_10117125 rootH1_101171252 828
83 3300005331 Ga0070670_100004868 Ga0070670_1000048683 828
84 3300005466 Ga0070685_10016444 Ga0070685_100164442 828
85 3300005617 Ga0068859_100019574 Ga0068859_1000195743 828
86 3300006931 Ga0097620_100019574 Ga0097620_1000195743 828
87 3300028381 Ga0268264_10001952 Ga0268264_100019525 828
88 3300005530 Ga0070679_100087841 Ga0070679_1000878412 829
89 3300053156 Ga0500622_0000024 Ga0500622_0000024_123766_126330 829
90 iso_pu_bacteria 2929921140 2929923180 829
91 iso_pu_bacteria 8003151029 8003153625 829
92 3300005339 Ga0070660_100043125 Ga0070660_1000431252 830
93 3300005539 Ga0068853_100002397 Ga0068853_1000023974 830
94 3300005548 Ga0070665_100000234 Ga0070665_10000023424 830
95 3300005563 Ga0068855_100007588 Ga0068855_1000075882 830
96 3300009093 Ga0105240_10001686 Ga0105240_1000168636 830
97 3300010375 Ga0105239_10004198 Ga0105239_100041987 830
98 3300013100 Ga0157373_10016036 Ga0157373_100160361 830
99 3300013105 Ga0157369_10048788 Ga0157369_100487882 830
100 3300013307 Ga0157372_10079115 Ga0157372_100791153 830
101 3300025913 Ga0207695_10000048 Ga0207695_10000048154 830
102 3300025913 Ga0207695_10010467 Ga0207695_100104674 830
103 3300025914 Ga0207671_10002527 Ga0207671_1000252713 830
104 3300025919 Ga0207657_10031409 Ga0207657_100314091 830
105 3300025949 Ga0207667_10017811 Ga0207667_100178115 830
106 3300026041 Ga0207639_10009170 Ga0207639_100091702 830
107 3300028379 Ga0268266_10000244 Ga0268266_1000024423 830
108 3300003320 rootH2_10009372 rootH2_1000937222 832
109 3300005328 Ga0070676_10002356 Ga0070676_100023566 832
110 3300005456 Ga0070678_100004523 Ga0070678_1000045234 832
111 3300006237 Ga0097621_100000394 Ga0097621_10000039420 832
112 3300006358 Ga0068871_100001064 Ga0068871_10000106410 832
113 3300006881 Ga0068865_100000219 Ga0068865_1000002198 832
114 3300009545 Ga0105237_10009349 Ga0105237_100093496 832
115 3300013306 Ga0163162_10000041 Ga0163162_1000004177 832
116 3300025907 Ga0207645_10002596 Ga0207645_100025964 832
117 3300025938 Ga0207704_10000113 Ga0207704_1000011314 832
118 3300026089 Ga0207648_10002173 Ga0207648_100021739 832
119 3300026121 Ga0207683_10064110 Ga0207683_100641102 832
120 3300047472 Ga0495686_0000098 Ga0495686_0000098_61948_64467 832
121 3300001979 JGI24740J21852_10000518 JGI24740J21852_100005183 833
122 3300002738 JGI25154J39366_1000040 JGI25154J39366_100004078 833
123 3300003215 JGI25153J46596_10000841 JGI25153J46596_100008417 833
124 3300003354 JGI25160J50197_1004046 JGI25160J50197_10040463 833
125 3300025246 Ga0209646_1000002 Ga0209646_1000002459 833
126 3300025250 Ga0209026_1000429 Ga0209026_100042927 833
127 3300025302 Ga0207426_1000518 Ga0207426_10005187 833
128 3300025917 Ga0207660_10002010 Ga0207660_1000201018 833
129 3300033179 Ga0307507_10000225 Ga0307507_1000022567 833
130 3300046524 Ga0495648_0007683 Ga0495648_0007683_2300_4810 833
131 3300053131 Ga0500652_003483 Ga0500652_003483_1276_3792 833

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01204

Trehalase

Trehalase

536

746

0.86

PF17389

Bac_rhamnosid6H

Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain

458

660

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
5z73-assembly1.cif.gz_B crystal structure of alkaline/neutral invertase invb from anabaena sp. pcc 7120 0.658 287 669
3skv-assembly3.cif.gz_B salicylyl-acyltransferase ssfx3 from a tetracycline biosynthetic pathway 0.6514 783 832
2jjb-assembly1.cif.gz_A family 37 trehalase from escherichia coli in complex with casuarine-6- o-alpha-glucopyranose 0.6506 306 665
5z6h-assembly2.cif.gz_B structure of periplasmic trehalase from diamondback moth gut bacteria in the apo form 0.6421 322 665
5z74-assembly1.cif.gz_A crystal structure of alkaline/neutral invertase invb from anabaena sp. pcc 7120 complexed with sucrose 0.6414 287 669
ID Description Score Start End Superfamily
4ktpA02 Mainly Beta;Sandwich;Maltose phosphorylase, domain 3;Maltose phosphorylase, domain 3 0.8413 668 718 2.60.420.10
af_Q54D71_948_1250_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.7052 353 666 1.50.10.10
af_Q54D71_948_1250_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.695 353 666 1.50.10.10
af_P77154_664_736_2.60.420.10 Mainly Beta;Sandwich;Maltose phosphorylase, domain 3;Maltose phosphorylase, domain 3 0.6896 668 731 2.60.420.10
1v7wA03 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.6763 325 669 1.50.10.10
ID Description Score Start End GO Terms
AF-A0A841J4N3-F1-model_v4 Alpha-L-rhamnosidase six-hairpin glycosidase domain-containing protein 0.9687 42 832 GO:0005975
AF-A0A7V8CYB1-F1-model_v4 Bacterial Ig-like domain-containing protein 0.9681 781 821
AF-A0A841J4N3-F1-model_v4 Alpha-L-rhamnosidase six-hairpin glycosidase domain-containing protein 0.9627 42 832 GO:0005975
AF-A0A4V1UZJ6-F1-model_v4 deleted 0.9559 32 155
AF-A0A7X8MAW0-F1-model_v4 Alpha-L-rhamnosidase six-hairpin glycosidase domain-containing protein 0.9532 57 832 GO:0004555
GO:0005991

Feature Viewer

pLDDT pTM Quality
85.63 0.88 High
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Predicted Structure (AlphaFold2)

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