F147401

General Info

Members Datasets Scaffolds Average Seq Length
130 114 260 314

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2919713450|2919718230
Length 361
Sequence DNAESHTPREDSGGDAAASRVSTDAAASRVGTDITTGADTAVTASGTDPAVVVDDVRKSFGEVQALQGISFTAARASVLGILGPNGAGKTTTVKILSTLLRPDSGSASVAGHDVVADAAGVRRSIMMTGQYAALDENLSGRENLELFGRLMGLPKKDARRRADTLLEEFDLVGAGKRAVRHYSGGMRRRVDIACGLVVRPEVVFLDEPTTGLDPRSRQGVWDLVNALKEQGITVLLTTQYLEEADVLSDNIIVIDKGTVIAEGTADELKEKTGGSYCEVVPLDPTQLRKAVTALGELVPEALRHEFAGDRISIPAPDGASTLAEAVRRLDAAGLELADIALRRPSLDDVFLSITGHSGGVQ

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
3 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
10 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
15 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
16 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
17 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
18 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
19 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
20 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
21 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
31 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
32 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
33 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
34 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
35 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
36 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
37 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
38 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
39 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
40 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
41 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
42 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
43 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
44 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
45 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
46 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
47 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
48 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
49 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
50 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
51 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
52 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
53 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
55 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
60 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
61 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
62 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
63 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
64 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
65 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
66 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
67 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
68 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
69 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
71 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
72 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
73 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
74 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
75 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
76 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
77 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
78 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
79 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
80 2547132424 Nocardia nova SH22a Isolate Unclassified
81 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
82 2582580736 Prauserella sp. Am3 Isolate Unclassified
83 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
84 2643221549 Agromyces sp. Root1464 Isolate Unclassified
85 2643221572 Leifsonia sp. Root60 Isolate Unclassified
86 2643221576 Nocardioides sp. Root614 Isolate Unclassified
87 2643221590 Nocardioides sp. Root682 Isolate Unclassified
88 2643221619 Agromyces sp. Root81 Isolate Unclassified
89 2643221649 Leifsonia sp. Root4 Isolate Unclassified
90 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
91 2643221692 Nocardia sp. Root136 Isolate Unclassified
92 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
93 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
94 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
95 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
96 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
97 2808606372 Agromyces sp. 23-23 Isolate Unclassified
98 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
99 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
100 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
101 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
102 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
103 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
104 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
105 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
106 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
107 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
108 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
109 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
110 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
111 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
112 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
113 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
114 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 70.77
Metatranscriptomes 0
Isolates 29.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.38
Nodule 0
Rhizoplane 0.77
Rhizosphere 76.92
Stem 0
Stem Tuber 0
Unclassified 0.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10218759 3300005327 Bacteria 1610
2 Ga0070660_100085815 3300005339 Bacteria 2476
3 Ga0070659_100004551 3300005366 Bacteria 9908
4 Ga0070667_100003167 3300005367 Bacteria 14102
5 Ga0070714_100084907 3300005435 Bacteria 2764
6 Ga0070663_100001282 3300005455 Bacteria 13765
7 Ga0070685_10001128 3300005466 Bacteria 14294
8 Ga0068853_100038641 3300005539 Bacteria 4066
9 Ga0068852_100048331 3300005616 Bacteria 3634
10 Ga0068870_10183447 3300005840 Bacteria 1258
11 Ga0075364_10014853 3300006051 Bacteria 4819
12 Ga0105245_10015557 3300009098 Bacteria 6633
13 Ga0105245_10243792 3300009098 Bacteria 1743
14 Ga0105243_10003110 3300009148 Bacteria 13646
15 Ga0105248_10573069 3300009177 Bacteria 1274
16 Ga0105238_10034155 3300009551 Bacteria 5176
17 Ga0105028_100032 3300009993 Bacteria 15715
18 Ga0157370_10452240 3300013104 Bacteria 1181
19 Ga0157379_10022257 3300014968 Bacteria 5614
20 Ga0213872_10037945 3300021361 Bacteria 2200
21 Ga0209784_100393 3300025224 Bacteria 19953
22 Ga0207643_10128236 3300025908 Bacteria 1507
23 Ga0207705_10020924 3300025909 Bacteria 4667
24 Ga0207695_10143742 3300025913 Bacteria 2332
25 Ga0207657_10041004 3300025919 Bacteria 4096
26 Ga0207646_10711161 3300025922 Bacteria 898
27 Ga0207664_10094565 3300025929 Bacteria 2456
28 Ga0207667_10000485 3300025949 Bacteria 52690
29 Ga0207678_10000313 3300026067 Bacteria 43785
30 Ga0207678_10446942 3300026067 Bacteria 1123
31 Ga0268266_10244071 3300028379 Bacteria 1659
32 Ga0307405_10176008 3300031731 Bacteria 1531
33 Ga0307406_10000554 3300031901 Bacteria 21507
34 Ga0307415_100389124 3300032126 Bacteria 1187
35 Ga0307415_100565456 3300032126 Bacteria 1006
36 Ga0307507_10082592 3300033179 Bacteria 2816
37 Ga0436360_0266088 3300039438 Bacteria 3177
38 Ga0436361_0633485 3300039447 Bacteria 6170
39 Ga0466969_0042992 3300044656 Bacteria 2253
40 Ga0453683_0085169 3300044673 Bacteria 1980
41 Ga0495627_000659 3300046453 Bacteria 26624
42 Ga0495583_0012572 3300046506 Unclassified 4780
43 Ga0496109_0358484 3300048912 Bacteria 1378
44 Ga0496118_0072736 3300048921 Bacteria 2467
45 Ga0496119_0007924 3300048922 Bacteria 9452
46 Ga0496120_0000503 3300048923 Bacteria 61033
47 Ga0496122_0054263 3300048925 Bacteria 3012
48 Ga0496125_0039965 3300048928 Bacteria 4031
49 Ga0496126_0027992 3300048929 Bacteria 5375
50 Ga0501033_0032607 3300049570 Bacteria 3912
51 Ga0501034_0136623 3300049571 Bacteria 2432
52 Ga0501036_0053131 3300049572 Bacteria 3432
53 Ga0501037_0046278 3300049573 Bacteria 3191
54 Ga0501038_0108788 3300049574 Bacteria 2298
55 Ga0501039_0030965 3300049575 Bacteria 4125
56 Ga0501040_0000479 3300049576 Bacteria 23837
57 Ga0501040_0017481 3300049576 Bacteria 4759
58 Ga0501041_0008332 3300049577 Bacteria 6101
59 Ga0501041_0069432 3300049577 Bacteria 2161
60 Ga0501042_0000633 3300049578 Bacteria 18819
61 Ga0501042_0043642 3300049578 Bacteria 3193
62 Ga0501046_0011681 3300049580 Bacteria 7506
63 Ga0501046_0170249 3300049580 Bacteria 1635
64 Ga0501047_0016719 3300049581 Bacteria 7007
65 Ga0501047_0016946 3300049581 Bacteria 6965
66 Ga0501047_0062649 3300049581 Bacteria 3587
67 Ga0501048_0066253 3300049582 Bacteria 2553
68 Ga0501068_0055754 3300049584 Bacteria 2395
69 Ga0501070_0028132 3300049586 Bacteria 4714
70 Ga0501071_0009615 3300049587 Bacteria 6450
71 Ga0501072_0009871 3300049588 Bacteria 7261
72 Ga0501074_0035238 3300049590 Bacteria 3625
73 Ga0501075_0043680 3300049591 Bacteria 3361
74 Ga0501075_0089432 3300049591 Bacteria 2335
75 Ga0501076_0006541 3300049592 Bacteria 8455
76 Ga0501076_0068056 3300049592 Bacteria 2844
77 Ga0501077_0048049 3300049593 Bacteria 2711
78 Ga0501079_0006941 3300049741 Bacteria 8534
79 Ga0501081_0003176 3300049743 Bacteria 10453
80 Ga0501044_0014072 3300049823 Bacteria 8640
81 Ga0501044_0271811 3300049823 Bacteria 1630
82 Ga0501045_0013822 3300049824 Bacteria 5708
83 Ga0501045_0106914 3300049824 Bacteria 2073
84 nmdc:mga03n38_83188_c1 3300050490 Bacteria 1508
85 nmdc:mga00v17_20772_c1 3300050491 Bacteria 3766
86 Ga0500651_0017106 3300053093 Bacteria 4466
87 Ga0500568_0000727 3300053139 Bacteria 23611
88 Ga0500570_000001 3300053724 Bacteria 243552
89 Ga0501084_0016350 3300054114 Bacteria 6161
90 Ga0501082_0004404 3300060353 Bacteria 12297
91 Ga0530510_0031366 3300061734 Bacteria 3821
92 Ga0530510_0293689 3300061734 Bacteria 1215
93 2919718230 2919713450 Bacteria 7431245
94 2548693092 2547132424 Bacteria 8348532
95 2552105762 2551306166 Bacteria 9731570
96 2552109702 2551306166 Bacteria 9731570
97 2583149619 2582580736 Bacteria 5325865
98 2587863006 2585428094 Bacteria 3604039
99 2643769524 2643221549 Bacteria 4042819
100 2643874728 2643221572 Bacteria 3614809
101 2643890949 2643221576 Bacteria 5214352
102 2643960005 2643221590 Bacteria 5214697
103 2644114143 2643221619 Bacteria 4158469
104 2644277469 2643221649 Bacteria 3867359
105 2644381784 2643221669 Bacteria 3611286
106 2644515419 2643221692 Bacteria 7282860
107 2712198418 2711768088 Bacteria 3195027
108 2723642805 2721755702 Bacteria 4373124
109 2739202786 2738543005 Bacteria 5278128
110 2739236139 2738543011 Bacteria 5731169
111 2744954534 2744054611 Bacteria 5611514
112 2808902801 2808606372 Bacteria 4649509
113 2881639640 2881636855 Bacteria 5205297
114 2889304507 2889300758 Bacteria 5690814
115 2895662897 2895660088 Bacteria 3782833
116 2904766154 2904765812 Bacteria 5369154
117 2904773355 2904770941 Bacteria 5580202
118 2908812083 2908811453 Bacteria 5478616
119 2919421420 2919420072 Bacteria 5390363
120 2919432822 2919432681 Bacteria 5390474
121 2919716451 2919713450 Bacteria 7431245
122 2935413023 2935409751 Bacteria 4179611
123 2939745095 2939743619 Bacteria 5762299
124 2946042997 2946041624 Bacteria 4191385
125 2946081969 2946080515 Bacteria 4310960
126 2956940969 2956939328 Bacteria 3474458
127 3001120662 3001119090 Bacteria 3449530
128 3001275458 3001272096 Bacteria 4729684
129 3006990403 3006988479 Bacteria 4767936
130 8004183385 8004182704 Bacteria 3391155
131 Ga0070658_10218759
132 Ga0070660_100085815
133 Ga0070659_100004551
134 Ga0070667_100003167
135 Ga0070714_100084907
136 Ga0070663_100001282
137 Ga0070685_10001128
138 Ga0068853_100038641
139 Ga0068852_100048331
140 Ga0068870_10183447
141 Ga0075364_10014853
142 Ga0105245_10015557
143 Ga0105245_10243792
144 Ga0105243_10003110
145 Ga0105248_10573069
146 Ga0105238_10034155
147 Ga0105028_100032
148 Ga0157370_10452240
149 Ga0157379_10022257
150 Ga0213872_10037945
151 Ga0209784_100393
152 Ga0207643_10128236
153 Ga0207705_10020924
154 Ga0207695_10143742
155 Ga0207657_10041004
156 Ga0207646_10711161
157 Ga0207664_10094565
158 Ga0207667_10000485
159 Ga0207678_10000313
160 Ga0207678_10446942
161 Ga0268266_10244071
162 Ga0307405_10176008
163 Ga0307406_10000554
164 Ga0307415_100389124
165 Ga0307415_100565456
166 Ga0307507_10082592
167 Ga0436360_0266088
168 Ga0436361_0633485
169 Ga0466969_0042992
170 Ga0453683_0085169
171 Ga0495627_000659
172 Ga0495583_0012572
173 Ga0496109_0358484
174 Ga0496118_0072736
175 Ga0496119_0007924
176 Ga0496120_0000503
177 Ga0496122_0054263
178 Ga0496125_0039965
179 Ga0496126_0027992
180 Ga0501033_0032607
181 Ga0501034_0136623
182 Ga0501036_0053131
183 Ga0501037_0046278
184 Ga0501038_0108788
185 Ga0501039_0030965
186 Ga0501040_0000479
187 Ga0501040_0017481
188 Ga0501041_0008332
189 Ga0501041_0069432
190 Ga0501042_0000633
191 Ga0501042_0043642
192 Ga0501046_0011681
193 Ga0501046_0170249
194 Ga0501047_0016719
195 Ga0501047_0016946
196 Ga0501047_0062649
197 Ga0501048_0066253
198 Ga0501068_0055754
199 Ga0501070_0028132
200 Ga0501071_0009615
201 Ga0501072_0009871
202 Ga0501074_0035238
203 Ga0501075_0043680
204 Ga0501075_0089432
205 Ga0501076_0006541
206 Ga0501076_0068056
207 Ga0501077_0048049
208 Ga0501079_0006941
209 Ga0501081_0003176
210 Ga0501044_0014072
211 Ga0501044_0271811
212 Ga0501045_0013822
213 Ga0501045_0106914
214 nmdc:mga03n38_83188_c1
215 nmdc:mga00v17_20772_c1
216 Ga0500651_0017106
217 Ga0500568_0000727
218 Ga0500570_000001
219 Ga0501084_0016350
220 Ga0501082_0004404
221 Ga0530510_0031366
222 Ga0530510_0293689
223 2919718230
224 2548693092
225 2552105762
226 2552109702
227 2583149619
228 2587863006
229 2643769524
230 2643874728
231 2643890949
232 2643960005
233 2644114143
234 2644277469
235 2644381784
236 2644515419
237 2712198418
238 2723642805
239 2739202786
240 2739236139
241 2744954534
242 2808902801
243 2881639640
244 2889304507
245 2895662897
246 2904766154
247 2904773355
248 2908812083
249 2919421420
250 2919432822
251 2919716451
252 2935413023
253 2939745095
254 2946042997
255 2946081969
256 2956940969
257 3001120662
258 3001275458
259 3006990403
260 8004183385

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

66

210

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vpl-assembly1.cif.gz_A-2 crystal structure of abc transporter atp-binding protein (tm0544) from thermotoga maritima at 2.10 a resolution 0.9624 29 250
6z4w-assembly1.cif.gz_A ftse structure from streptococcus pneumoniae in complex with adp (space group p 1) 0.9524 28 243
6z67-assembly2.cif.gz_B ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.9404 28 243
3gfo-assembly1.cif.gz_A structure of cbio1 from clostridium perfringens: part of the abc transporter complex cbionq. 0.9382 26 247
8idd-assembly1.cif.gz_B cryo-em structure of mycobacterium tuberculosis atp bound ftsex/ripc complex in peptidisc 0.9274 29 243
ID Description Score Start End Superfamily
af_P9WQL9_1_244_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9705 23 252 3.40.50.300
1vplA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9624 29 250 3.40.50.300
af_Q9VVK6_333_568_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9491 28 251 3.40.50.300
af_A4I2P8_1496_1744_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9468 27 250 3.40.50.300
af_O05779_1_226_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9434 29 243 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A0N1KPJ6-F1-model_v4 ABC transporter ATP-binding protein 0.9646 28 251 GO:0005524
GO:0016887
AF-A0A0U3H3Q4-F1-model_v4 ABC transporter ATP-binding protein 0.9607 28 250 GO:0005524
GO:0016887
AF-A0A0R0D0B4-F1-model_v4 ABC transporter domain-containing protein 0.9576 29 248 GO:0005524
GO:0016887
AF-A0A7V0KKK6-F1-model_v4 ABC transporter ATP-binding protein 0.951 29 251 GO:0005524
GO:0016887
AF-A0A842TW32-F1-model_v4 ATP-binding cassette domain-containing protein 0.9505 26 250 GO:0005524
GO:0016887

Map