F146487

General Info

Members Datasets Scaffolds Average Seq Length
130 69 260 465

Family's Representative Sequence

Representative Sequence 3300044693|Ga0466961_0035076|Ga0466961_0035076_1571_3028
Length 485
Sequence LERDDKVQRFDFVAIGGGSAGFNAARLAASLGLKAAVVDGAKDLGGLCILKGCMPSKTLLYMAEVLHLAQKAKTFGLSIPKAAANMKAIHARKRKIIGEFADYRVKALESGKFALIRAHAKFVDSHTIELSTGERLRAKYFLVGTGSKVSVPPIPGLADVPFWTSDDVLDLDVVPKSVIVLGGGIVACELAQMLNRFGARVTLVQRSPNILRDHSAAASVVVQEAFVDEGIELFAGTQLQQVDHAHRKGFTVEFVHDGKLIRRRADHLFNALGREPNTAGLALDAAGIAARPNGQIITNEWQQTSQSHIYAAGDCAGPAEIVHIAIQQAELAVRHAVGVKGIKPIDYSLLLNVVFTDPQLATIGRLERDLDEEGVRYLSASYPFNDHGKSILMDANYGYVKVIAEPGSGRILGAEIVGKDAGELIHCFSGPLALKATVHDLLRAPWYHPTLAEIITYPLEEIAERIGPLPTEPRAPKKRHPGRRA

Samples

Sample ID Description Type Environment
1 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
13 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
14 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
15 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
26 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
27 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
28 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
29 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
30 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
31 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
32 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
33 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
34 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
35 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
38 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
39 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
40 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
41 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
42 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
43 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
44 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
45 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
46 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
47 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
48 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
49 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
50 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
51 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
52 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
53 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
54 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
55 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
65 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
66 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
68 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
69 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.23
Metatranscriptomes 0
Isolates 0.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.77
Nodule 0
Rhizoplane 0
Rhizosphere 92.31
Stem 0
Stem Tuber 0
Unclassified 0.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466961_0035076 3300044693 Bacteria 3221
2 rootH2_10017543 3300003320 Bacteria 8460
3 rootH2_10028108 3300003320 Bacteria 5682
4 rootH2_10064476 3300003320 Bacteria 4372
5 rootL2_10118467 3300003322 Bacteria 2185
6 rootH1_10020349 3300003323 Bacteria 10517
7 rootH1_10051477 3300003323 Bacteria 2085
8 Ga0068869_100000305 3300005334 Bacteria 26137
9 Ga0068868_100112730 3300005338 Bacteria 2211
10 Ga0070713_100025946 3300005436 Bacteria 4591
11 Ga0068867_100030056 3300005459 Bacteria 3918
12 Ga0068853_100301949 3300005539 Bacteria 1480
13 Ga0068857_100073319 3300005577 Bacteria 3050
14 Ga0068856_100031044 3300005614 Bacteria 5226
15 Ga0070717_10000060 3300006028 Bacteria 92521
16 Ga0068871_100001257 3300006358 Bacteria 16953
17 Ga0068865_100134617 3300006881 Bacteria 1855
18 Ga0207662_10110526 3300025918 Bacteria 1713
19 Ga0207700_10054695 3300025928 Bacteria 2998
20 Ga0207704_10012934 3300025938 Bacteria 4158
21 Ga0207689_10001056 3300025942 Bacteria 26494
22 Ga0207661_10006284 3300025944 Bacteria 8402
23 Ga0207661_10113714 3300025944 Bacteria 2294
24 Ga0207677_10088636 3300026023 Bacteria 2244
25 Ga0207639_10211354 3300026041 Bacteria 1670
26 Ga0207702_10000829 3300026078 Bacteria 32602
27 Ga0207648_10043456 3300026089 Bacteria 3944
28 Ga0207674_10088856 3300026116 Bacteria 3082
29 Ga0265337_1003028 3300028556 Bacteria 7430
30 Ga0265337_1022897 3300028556 Bacteria 1929
31 Ga0265319_1000008 3300028563 Bacteria 215029
32 Ga0265319_1000880 3300028563 Bacteria 19045
33 Ga0265319_1005050 3300028563 Bacteria 6414
34 Ga0265319_1007968 3300028563 Bacteria 4696
35 Ga0265319_1019453 3300028563 Bacteria 2534
36 Ga0265318_10000023 3300028577 Bacteria 160826
37 Ga0265318_10006010 3300028577 Bacteria 5631
38 Ga0265318_10007643 3300028577 Bacteria 4869
39 Ga0265323_10000126 3300028653 Bacteria 43711
40 Ga0265323_10003563 3300028653 Bacteria 6845
41 Ga0265323_10009503 3300028653 Bacteria 3966
42 Ga0265323_10010631 3300028653 Bacteria 3726
43 Ga0265323_10014792 3300028653 Bacteria 3078
44 Ga0265323_10038600 3300028653 Bacteria 1745
45 Ga0265322_10000638 3300028654 Bacteria 13191
46 Ga0265322_10001869 3300028654 Bacteria 6659
47 Ga0265336_10010694 3300028666 Bacteria 3138
48 Ga0307515_10144568 3300028794 Bacteria 2528
49 Ga0265338_10000299 3300028800 Bacteria 89317
50 Ga0265338_10008545 3300028800 Bacteria 12398
51 Ga0265338_10178995 3300028800 Unclassified 1618
52 Ga0265324_10012328 3300029957 Bacteria 3225
53 Ga0265330_10039044 3300031235 Bacteria 2110
54 Ga0265328_10032772 3300031239 Bacteria 1928
55 Ga0265320_10000160 3300031240 Bacteria 56027
56 Ga0265320_10001002 3300031240 Bacteria 20988
57 Ga0265320_10003968 3300031240 Bacteria 9760
58 Ga0265320_10005803 3300031240 Bacteria 7865
59 Ga0265320_10007602 3300031240 Bacteria 6716
60 Ga0265320_10022064 3300031240 Bacteria 3413
61 Ga0265320_10049738 3300031240 Bacteria 2040
62 Ga0265331_10008176 3300031250 Bacteria 5970
63 Ga0265327_10000023 3300031251 Bacteria 382703
64 Ga0265327_10003888 3300031251 Bacteria 13751
65 Ga0265327_10004005 3300031251 Bacteria 13426
66 Ga0265327_10043213 3300031251 Bacteria 2413
67 Ga0265316_10018297 3300031344 Bacteria 6023
68 Ga0265316_10029911 3300031344 Bacteria 4471
69 Ga0265316_10032951 3300031344 Bacteria 4224
70 Ga0265316_10036431 3300031344 Bacteria 3978
71 Ga0265316_10039790 3300031344 Bacteria 3774
72 Ga0307408_100000007 3300031548 Bacteria 463086
73 Ga0265313_10001729 3300031595 Bacteria 20091
74 Ga0265313_10004119 3300031595 Bacteria 11312
75 Ga0265313_10005634 3300031595 Bacteria 9155
76 Ga0265313_10005659 3300031595 Bacteria 9132
77 Ga0265313_10017894 3300031595 Bacteria 4003
78 Ga0307508_10000031 3300031616 Bacteria 163301
79 Ga0265314_10001764 3300031711 Bacteria 23355
80 Ga0265314_10019337 3300031711 Bacteria 5278
81 Ga0265314_10020848 3300031711 Bacteria 5054
82 Ga0265314_10027262 3300031711 Bacteria 4279
83 Ga0265314_10033586 3300031711 Bacteria 3759
84 Ga0265342_10005430 3300031712 Bacteria 9722
85 Ga0265342_10006997 3300031712 Bacteria 8331
86 Ga0265342_10011202 3300031712 Bacteria 6154
87 Ga0307410_10000001 3300031852 Bacteria 162839
88 Ga0307407_10000671 3300031903 Bacteria 11050
89 Ga0307407_10025568 3300031903 Bacteria 3113
90 Ga0307409_100000033 3300031995 Bacteria 48825
91 Ga0307416_100000111 3300032002 Bacteria 50097
92 Ga0307416_100014804 3300032002 Bacteria 5361
93 Ga0395905_0000018 3300037471 Bacteria 369321
94 Ga0451577_0000024 3300042876 Bacteria 411758
95 Ga0451577_0001997 3300042876 Bacteria 25424
96 Ga0451577_0074605 3300042876 Bacteria 3025
97 Ga0451577_0134848 3300042876 Bacteria 2217
98 Ga0453683_0001465 3300044673 Bacteria 20324
99 Ga0453683_0096797 3300044673 Bacteria 1852
100 Ga0453684_0000266 3300044712 Bacteria 225447
101 Ga0453684_0004779 3300044712 Bacteria 27934
102 Ga0453684_0015958 3300044712 Bacteria 11809
103 Ga0453684_0153426 3300044712 Bacteria 2734
104 Ga0451576_0001196 3300045051 Bacteria 46432
105 Ga0451576_0001600 3300045051 Bacteria 38061
106 Ga0451576_0003090 3300045051 Bacteria 23358
107 Ga0451576_0014366 3300045051 Bacteria 8817
108 Ga0466967_0012502 3300045976 Bacteria 6498
109 Ga0501032_0012602 3300049569 Bacteria 6036
110 Ga0501032_0033405 3300049569 Bacteria 3525
111 Ga0501033_0001853 3300049570 Bacteria 18386
112 Ga0501033_0018884 3300049570 Bacteria 5211
113 Ga0501034_0058763 3300049571 Bacteria 3863
114 Ga0501036_0042096 3300049572 Bacteria 3867
115 Ga0501037_0001002 3300049573 Bacteria 20926
116 Ga0501037_0003650 3300049573 Bacteria 11166
117 Ga0501038_0000256 3300049574 Bacteria 44941
118 Ga0501042_0000209 3300049578 Bacteria 27784
119 Ga0501046_0000645 3300049580 Bacteria 34119
120 Ga0501046_0146163 3300049580 Bacteria 1785
121 Ga0501047_0017488 3300049581 Bacteria 6867
122 Ga0501047_0031279 3300049581 Bacteria 5133
123 Ga0501047_0252376 3300049581 Bacteria 1612
124 Ga0501070_0106112 3300049586 Bacteria 2322
125 Ga0501083_0017043 3300049744 Bacteria 5071
126 Ga0501035_0022721 3300049822 Bacteria 5760
127 Ga0501044_0000599 3300049823 Bacteria 43688
128 Ga0501044_0000882 3300049823 Bacteria 36193
129 Ga0500622_0034339 3300053156 Bacteria 2657
130 2788436478 2786546940 Bacteria 6396474
131 Ga0466961_0035076
132 rootH2_10017543
133 rootH2_10028108
134 rootH2_10064476
135 rootL2_10118467
136 rootH1_10020349
137 rootH1_10051477
138 Ga0068869_100000305
139 Ga0068868_100112730
140 Ga0070713_100025946
141 Ga0068867_100030056
142 Ga0068853_100301949
143 Ga0068857_100073319
144 Ga0068856_100031044
145 Ga0070717_10000060
146 Ga0068871_100001257
147 Ga0068865_100134617
148 Ga0207662_10110526
149 Ga0207700_10054695
150 Ga0207704_10012934
151 Ga0207689_10001056
152 Ga0207661_10006284
153 Ga0207661_10113714
154 Ga0207677_10088636
155 Ga0207639_10211354
156 Ga0207702_10000829
157 Ga0207648_10043456
158 Ga0207674_10088856
159 Ga0265337_1003028
160 Ga0265337_1022897
161 Ga0265319_1000008
162 Ga0265319_1000880
163 Ga0265319_1005050
164 Ga0265319_1007968
165 Ga0265319_1019453
166 Ga0265318_10000023
167 Ga0265318_10006010
168 Ga0265318_10007643
169 Ga0265323_10000126
170 Ga0265323_10003563
171 Ga0265323_10009503
172 Ga0265323_10010631
173 Ga0265323_10014792
174 Ga0265323_10038600
175 Ga0265322_10000638
176 Ga0265322_10001869
177 Ga0265336_10010694
178 Ga0307515_10144568
179 Ga0265338_10000299
180 Ga0265338_10008545
181 Ga0265338_10178995
182 Ga0265324_10012328
183 Ga0265330_10039044
184 Ga0265328_10032772
185 Ga0265320_10000160
186 Ga0265320_10001002
187 Ga0265320_10003968
188 Ga0265320_10005803
189 Ga0265320_10007602
190 Ga0265320_10022064
191 Ga0265320_10049738
192 Ga0265331_10008176
193 Ga0265327_10000023
194 Ga0265327_10003888
195 Ga0265327_10004005
196 Ga0265327_10043213
197 Ga0265316_10018297
198 Ga0265316_10029911
199 Ga0265316_10032951
200 Ga0265316_10036431
201 Ga0265316_10039790
202 Ga0307408_100000007
203 Ga0265313_10001729
204 Ga0265313_10004119
205 Ga0265313_10005634
206 Ga0265313_10005659
207 Ga0265313_10017894
208 Ga0307508_10000031
209 Ga0265314_10001764
210 Ga0265314_10019337
211 Ga0265314_10020848
212 Ga0265314_10027262
213 Ga0265314_10033586
214 Ga0265342_10005430
215 Ga0265342_10006997
216 Ga0265342_10011202
217 Ga0307410_10000001
218 Ga0307407_10000671
219 Ga0307407_10025568
220 Ga0307409_100000033
221 Ga0307416_100000111
222 Ga0307416_100014804
223 Ga0395905_0000018
224 Ga0451577_0000024
225 Ga0451577_0001997
226 Ga0451577_0074605
227 Ga0451577_0134848
228 Ga0453683_0001465
229 Ga0453683_0096797
230 Ga0453684_0000266
231 Ga0453684_0004779
232 Ga0453684_0015958
233 Ga0453684_0153426
234 Ga0451576_0001196
235 Ga0451576_0001600
236 Ga0451576_0003090
237 Ga0451576_0014366
238 Ga0466967_0012502
239 Ga0501032_0012602
240 Ga0501032_0033405
241 Ga0501033_0001853
242 Ga0501033_0018884
243 Ga0501034_0058763
244 Ga0501036_0042096
245 Ga0501037_0001002
246 Ga0501037_0003650
247 Ga0501038_0000256
248 Ga0501042_0000209
249 Ga0501046_0000645
250 Ga0501046_0146163
251 Ga0501047_0017488
252 Ga0501047_0031279
253 Ga0501047_0252376
254 Ga0501070_0106112
255 Ga0501083_0017043
256 Ga0501035_0022721
257 Ga0501044_0000599
258 Ga0501044_0000882
259 Ga0500622_0034339
260 2788436478

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02852

Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

351

458

0.98

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

10

329

0.95

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

177

258

0.92

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

80

313

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4mig-assembly1.cif.gz_A pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9775 4 33
4mif-assembly1.cif.gz_D pyranose 2-oxidase from phanerochaete chrysosporium, wild type from natural source 0.9765 4 33
4mig-assembly1.cif.gz_B pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9746 4 33
4mig-assembly1.cif.gz_C pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9714 4 33
4mif-assembly1.cif.gz_B pyranose 2-oxidase from phanerochaete chrysosporium, wild type from natural source 0.9706 4 33
ID Description Score Start End Superfamily
af_A0A1D6LYX0_29_117_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.964 161 230 3.50.50.60
af_Q8LLD4_13_381_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9499 2 35 3.50.50.60
1ebdB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.948 156 265 3.50.50.60
4k8dA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9449 144 263 3.50.50.60
5x1yA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9398 144 264 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A350UWE4-F1-model_v4 Dihydrolipoyl dehydrogenase 0.9676 2 458 GO:0003955
GO:0016668
GO:0050660
AF-A0A6N4X3T6-F1-model_v4 Mercuric ion reductase (EC) (EC 1.16.1.1) 0.9646 2 458 GO:0000166
GO:0016152
GO:0016668
AF-A0A350UWE4-F1-model_v4 Dihydrolipoyl dehydrogenase 0.9634 2 458 GO:0003955
GO:0016668
GO:0050660
AF-A0A537HML6-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9598 150 409 GO:0003955
GO:0050660
AF-A0A6N4X3T6-F1-model_v4 Mercuric ion reductase (EC) (EC 1.16.1.1) 0.9544 2 458 GO:0000166
GO:0016152
GO:0016668

Map