F145316

General Info

Members Datasets Scaffolds Average Seq Length
130 59 130 242

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10039993|Ga0114129_100399934
Length 265
Sequence MEQALLLLYWLPCTPVKLLFGSMTKLGVNIDHIATIREVRKTNEPDPVAAAVIAELAGADGITVHLRADRRHIQDRDVELLRETVKTRLNVEMATTEEMVQIALEIKPDTVTLVPEFPGEITTQGGLDCVRNFEQIRSAVQKLEAGGVAVSLFIDPEDLQIEAAQKLEVGIIEINTARYSDASLYLTLKTEPQTEKALDELRAAAELAESLGLRVHAGHGLTYRNVKAVSGIPQMEEFNIGHNIIARAVLVGLDRAVREMIELLK

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
37 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
38 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
39 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
40 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
41 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
42 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
43 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
44 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
45 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
46 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
47 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
48 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
49 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
50 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
51 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
52 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
53 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
54 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
55 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
56 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
57 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
58 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
59 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_13186264 2162886012 Bacteria 1007
2 Ga0065715_10355670 3300005293 Bacteria 943
3 Ga0065707_10004196 3300005295 Bacteria 5070
4 Ga0070670_100173799 3300005331 Bacteria 1869
5 Ga0070666_10433270 3300005335 Bacteria 948
6 Ga0070680_100062139 3300005336 Bacteria 3058
7 Ga0070673_100060566 3300005364 Bacteria 3000
8 Ga0070700_100077874 3300005441 Bacteria 2133
9 Ga0070694_100227073 3300005444 Bacteria 1403
10 Ga0070708_100514696 3300005445 Bacteria 1129
11 Ga0070706_100010385 3300005467 Bacteria 8648
12 Ga0070706_100043410 3300005467 Bacteria 4154
13 Ga0070707_100014683 3300005468 Bacteria 7340
14 Ga0070707_100347490 3300005468 Bacteria 1441
15 Ga0070707_100573640 3300005468 Bacteria 1090
16 Ga0070698_100000410 3300005471 Bacteria 45619
17 Ga0070698_100002582 3300005471 Bacteria 19939
18 Ga0070698_100025365 3300005471 Bacteria 6179
19 Ga0070699_100001342 3300005518 Bacteria 22665
20 Ga0070697_100005258 3300005536 Bacteria 9939
21 Ga0070697_100007478 3300005536 Bacteria 8502
22 Ga0070696_100016633 3300005546 Bacteria 4958
23 Ga0070693_100230987 3300005547 Bacteria 1217
24 Ga0068858_100061706 3300005842 Bacteria 3466
25 Ga0068860_100454599 3300005843 Bacteria 1274
26 Ga0075431_100172722 3300006847 Bacteria 2221
27 Ga0075431_100176561 3300006847 Bacteria 2194
28 Ga0075433_10441414 3300006852 Bacteria 1147
29 Ga0075434_100003466 3300006871 Bacteria 14097
30 Ga0075434_100183296 3300006871 Bacteria 2114
31 Ga0111539_10268781 3300009094 Bacteria 1985
32 Ga0114129_10022971 3300009147 Bacteria 8847
33 Ga0114129_10039993 3300009147 Bacteria 6614
34 Ga0114129_10059296 3300009147 Bacteria 5352
35 Ga0114129_10683162 3300009147 Bacteria 1321
36 Ga0105239_10166813 3300010375 Bacteria 2463
37 Ga0163162_10011804 3300013306 Bacteria 8520
38 Ga0163163_10321913 3300014325 Bacteria 1600
39 Ga0157380_10052905 3300014326 Bacteria 3217
40 Ga0207684_10011638 3300025910 Bacteria 7683
41 Ga0207684_10068468 3300025910 Bacteria 3017
42 Ga0207646_10003419 3300025922 Bacteria 17929
43 Ga0207646_10119845 3300025922 Bacteria 2364
44 Ga0207659_10075847 3300025926 Bacteria 2469
45 Ga0207651_10054777 3300025960 Bacteria 2735
46 Ga0207703_10102961 3300026035 Bacteria 2423
47 Ga0207708_10065244 3300026075 Bacteria 2783
48 Ga0268264_10141767 3300028381 Bacteria 2144
49 Ga0268264_10630498 3300028381 Bacteria 1059
50 Ga0265318_10011269 3300028577 Bacteria 3856
51 Ga0316575_10002435 3300031665 Bacteria 6243
52 Ga0316583_10000559 3300032133 Bacteria 11244
53 Ga0373928_0006155 3300035084 Bacteria 2304
54 Ga0373932_0044531 3300035112 Bacteria 1294
55 Ga0373956_0207662 3300035119 Bacteria 929
56 Ga0316574_0000019 3300035398 Bacteria 40791
57 Ga0316574_0400829 3300035398 Bacteria 864
58 Ga0373937_0040040 3300036401 Bacteria 4272
59 Ga0373937_0873306 3300036401 Bacteria 848
60 Ga0316584_0007962 3300036712 Bacteria 7272
61 Ga0316584_0293563 3300036712 Bacteria 1179
62 Ga0316584_0597313 3300036712 Unclassified 766
63 Ga0451577_0000357 3300042876 Bacteria 85114
64 Ga0451577_0000916 3300042876 Bacteria 43257
65 Ga0451577_0004548 3300042876 Bacteria 14597
66 Ga0451577_0006999 3300042876 Bacteria 11139
67 Ga0451577_0010381 3300042876 Bacteria 8908
68 Ga0451577_0047843 3300042876 Bacteria 3822
69 Ga0451577_0092989 3300042876 Bacteria 2693
70 Ga0451577_0246918 3300042876 Bacteria 1615
71 Ga0451577_0275081 3300042876 Unclassified 1525
72 Ga0451577_0628414 3300042876 Bacteria 974
73 Ga0453683_0000002 3300044673 Bacteria 1244396
74 Ga0453683_0000052 3300044673 Bacteria 199548
75 Ga0453683_0000058 3300044673 Bacteria 189089
76 Ga0453683_0000127 3300044673 Bacteria 113365
77 Ga0453683_0000208 3300044673 Bacteria 79154
78 Ga0453683_0000279 3300044673 Bacteria 66929
79 Ga0453683_0004172 3300044673 Bacteria 10344
80 Ga0453683_0019237 3300044673 Bacteria 4375
81 Ga0453683_0020895 3300044673 Unclassified 4181
82 Ga0453683_0027467 3300044673 Bacteria 3609
83 Ga0453683_0057044 3300044673 Bacteria 2444
84 Ga0453683_0170393 3300044673 Bacteria 1379
85 Ga0453683_0458932 3300044673 Bacteria 824
86 Ga0453684_0000380 3300044712 Bacteria 182003
87 Ga0453684_0000690 3300044712 Bacteria 120137
88 Ga0453684_0001026 3300044712 Bacteria 89275
89 Ga0453684_0001103 3300044712 Bacteria 84832
90 Ga0453684_0001336 3300044712 Bacteria 72324
91 Ga0453684_0001446 3300044712 Bacteria 67629
92 Ga0453684_0021658 3300044712 Bacteria 9587
93 Ga0453684_0034713 3300044712 Bacteria 6990
94 Ga0453684_0039133 3300044712 Bacteria 6468
95 Ga0453684_0054684 3300044712 Bacteria 5197
96 Ga0453684_0054789 3300044712 Bacteria 5190
97 Ga0453684_0083529 3300044712 Bacteria 3974
98 Ga0453684_0088630 3300044712 Bacteria 3831
99 Ga0453684_0090719 3300044712 Bacteria 3775
100 Ga0453684_0120323 3300044712 Bacteria 3172
101 Ga0453684_0122297 3300044712 Bacteria 3140
102 Ga0453684_0229274 3300044712 Unclassified 2145
103 Ga0453684_0248588 3300044712 Bacteria 2043
104 Ga0453684_0295763 3300044712 Bacteria 1842
105 Ga0453684_0826322 3300044712 Bacteria 997
106 Ga0453684_0989828 3300044712 Bacteria 895
107 Ga0451576_0000382 3300045051 Bacteria 103605
108 Ga0451576_0000601 3300045051 Bacteria 75939
109 Ga0451576_0072421 3300045051 Bacteria 3586
110 Ga0451576_0087271 3300045051 Bacteria 3245
111 Ga0451576_0088139 3300045051 Bacteria 3228
112 Ga0451576_0138474 3300045051 Bacteria 2539
113 Ga0451576_0151952 3300045051 Bacteria 2415
114 Ga0451576_0152433 3300045051 Bacteria 2410
115 Ga0451576_0217609 3300045051 Bacteria 1995
116 Ga0451576_0595440 3300045051 Bacteria 1162
117 Ga0501032_0238089 3300049569 Bacteria 1183
118 Ga0501048_0367325 3300049582 Bacteria 1027
119 Ga0501073_0109488 3300049589 Bacteria 1916
120 Ga0501075_0501662 3300049591 Bacteria 926
121 nmdc:mga05p37_15709_c1 3300050507 Bacteria 9101
122 nmdc:mga05p37_302068_c1 3300050507 Bacteria 1901
123 nmdc:mga05p37_385355_c1 3300050507 Bacteria 1641
124 nmdc:mga06r32_375950_c1 3300050510 Bacteria 1404
125 nmdc:mga08y16_281168_c1 3300050511 Bacteria 1716
126 nmdc:mga0n895_172314_c1 3300050512 Bacteria 2196
127 nmdc:mga0n895_3501_c1 3300050512 Bacteria 12674
128 nmdc:mga0rr50_371729_c1 3300050513 Bacteria 1204
129 nmdc:mga0a205_2354_c1 3300050515 Bacteria 15411
130 Ga0530510_0110647 3300061734 Bacteria 2011

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300036712 Ga0316584_0597313 Ga0316584_0597313_111_755 214
2 3300044673 Ga0453683_0057044 Ga0453683_0057044_39_683 214
3 3300005468 Ga0070707_100573640 Ga0070707_1005736401 226
4 3300005471 Ga0070698_100002582 Ga0070698_10000258216 226
5 3300005536 Ga0070697_100005258 Ga0070697_1000052589 226
6 3300036712 Ga0316584_0007962 Ga0316584_0007962_3031_3711 226
7 3300044712 Ga0453684_0120323 Ga0453684_0120323_882_1607 226
8 3300042876 Ga0451577_0010381 Ga0451577_0010381_7908_8699 228
9 3300044712 Ga0453684_0083529 Ga0453684_0083529_1428_2117 229
10 3300014325 Ga0163163_10321913 Ga0163163_103219132 231
11 3300044673 Ga0453683_0004172 Ga0453683_0004172_4502_5206 234
12 3300042876 Ga0451577_0092989 Ga0451577_0092989_886_1596 236
13 3300044712 Ga0453684_0989828 Ga0453684_0989828_45_755 236
14 3300035398 Ga0316574_0400829 Ga0316574_0400829_10_726 238
15 3300042876 Ga0451577_0246918 Ga0451577_0246918_754_1476 238
16 3300049589 Ga0501073_0109488 Ga0501073_0109488_1186_1902 238
17 3300005295 Ga0065707_10004196 Ga0065707_100041964 239
18 3300028577 Ga0265318_10011269 Ga0265318_100112692 239
19 3300031665 Ga0316575_10002435 Ga0316575_100024354 239
20 3300032133 Ga0316583_10000559 Ga0316583_100005595 239
21 3300035084 Ga0373928_0006155 Ga0373928_0006155_577_1296 239
22 3300035112 Ga0373932_0044531 Ga0373932_0044531_531_1250 239
23 3300035119 Ga0373956_0207662 Ga0373956_0207662_118_837 239
24 3300035398 Ga0316574_0000019 Ga0316574_0000019_24715_25434 239
25 3300036401 Ga0373937_0040040 Ga0373937_0040040_3488_4207 239
26 3300036401 Ga0373937_0873306 Ga0373937_0873306_29_748 239
27 3300036712 Ga0316584_0293563 Ga0316584_0293563_62_781 239
28 3300042876 Ga0451577_0000357 Ga0451577_0000357_25653_26372 239
29 3300042876 Ga0451577_0000916 Ga0451577_0000916_24094_24813 239
30 3300042876 Ga0451577_0004548 Ga0451577_0004548_1848_2567 239
31 3300042876 Ga0451577_0006999 Ga0451577_0006999_5416_6135 239
32 3300042876 Ga0451577_0275081 Ga0451577_0275081_397_1116 239
33 3300042876 Ga0451577_0628414 Ga0451577_0628414_53_772 239
34 3300044673 Ga0453683_0000002 Ga0453683_0000002_1023853_1024572 239
35 3300044673 Ga0453683_0000058 Ga0453683_0000058_74134_74853 239
36 3300044673 Ga0453683_0000127 Ga0453683_0000127_57482_58201 239
37 3300044673 Ga0453683_0000208 Ga0453683_0000208_17861_18580 239
38 3300044673 Ga0453683_0000279 Ga0453683_0000279_23123_23842 239
39 3300044673 Ga0453683_0019237 Ga0453683_0019237_3595_4314 239
40 3300044673 Ga0453683_0020895 Ga0453683_0020895_2854_3573 239
41 3300044673 Ga0453683_0027467 Ga0453683_0027467_1834_2553 239
42 3300044673 Ga0453683_0458932 Ga0453683_0458932_40_759 239
43 3300044712 Ga0453684_0000380 Ga0453684_0000380_130946_131665 239
44 3300044712 Ga0453684_0000690 Ga0453684_0000690_15975_16694 239
45 3300044712 Ga0453684_0001026 Ga0453684_0001026_30940_31659 239
46 3300044712 Ga0453684_0001103 Ga0453684_0001103_25342_26061 239
47 3300044712 Ga0453684_0021658 Ga0453684_0021658_6950_7669 239
48 3300044712 Ga0453684_0034713 Ga0453684_0034713_5808_6527 239
49 3300044712 Ga0453684_0039133 Ga0453684_0039133_4959_5678 239
50 3300044712 Ga0453684_0054684 Ga0453684_0054684_4364_5083 239
51 3300044712 Ga0453684_0054789 Ga0453684_0054789_1815_2534 239
52 3300044712 Ga0453684_0088630 Ga0453684_0088630_2746_3465 239
53 3300044712 Ga0453684_0122297 Ga0453684_0122297_1502_2221 239
54 3300044712 Ga0453684_0229274 Ga0453684_0229274_378_1097 239
55 3300044712 Ga0453684_0248588 Ga0453684_0248588_440_1159 239
56 3300044712 Ga0453684_0295763 Ga0453684_0295763_585_1304 239
57 3300044712 Ga0453684_0826322 Ga0453684_0826322_66_785 239
58 3300045051 Ga0451576_0000382 Ga0451576_0000382_81072_81791 239
59 3300045051 Ga0451576_0000601 Ga0451576_0000601_41060_41779 239
60 3300045051 Ga0451576_0072421 Ga0451576_0072421_1195_1914 239
61 3300045051 Ga0451576_0087271 Ga0451576_0087271_44_763 239
62 3300045051 Ga0451576_0088139 Ga0451576_0088139_518_1237 239
63 3300045051 Ga0451576_0138474 Ga0451576_0138474_441_1160 239
64 3300045051 Ga0451576_0151952 Ga0451576_0151952_450_1169 239
65 3300045051 Ga0451576_0152433 Ga0451576_0152433_387_1106 239
66 3300045051 Ga0451576_0217609 Ga0451576_0217609_707_1426 239
67 3300045051 Ga0451576_0595440 Ga0451576_0595440_126_845 239
68 3300049569 Ga0501032_0238089 Ga0501032_0238089_38_775 239
69 3300005445 Ga0070708_100514696 Ga0070708_1005146962 240
70 3300005467 Ga0070706_100010385 Ga0070706_1000103858 240
71 3300005467 Ga0070706_100043410 Ga0070706_1000434104 240
72 3300005468 Ga0070707_100014683 Ga0070707_1000146833 240
73 3300005468 Ga0070707_100347490 Ga0070707_1003474901 240
74 3300005471 Ga0070698_100025365 Ga0070698_1000253656 240
75 3300005518 Ga0070699_100001342 Ga0070699_10000134218 240
76 3300005536 Ga0070697_100007478 Ga0070697_1000074788 240
77 3300005546 Ga0070696_100016633 Ga0070696_1000166332 240
78 3300005547 Ga0070693_100230987 Ga0070693_1002309871 240
79 3300006871 Ga0075434_100183296 Ga0075434_1001832962 240
80 3300009147 Ga0114129_10022971 Ga0114129_100229716 240
81 3300025910 Ga0207684_10011638 Ga0207684_100116384 240
82 3300025910 Ga0207684_10068468 Ga0207684_100684682 240
83 3300025922 Ga0207646_10003419 Ga0207646_1000341911 240
84 3300025922 Ga0207646_10119845 Ga0207646_101198452 240
85 3300042876 Ga0451577_0047843 Ga0451577_0047843_1685_2419 240
86 3300044673 Ga0453683_0000052 Ga0453683_0000052_117378_118136 240
87 3300044673 Ga0453683_0170393 Ga0453683_0170393_64_789 240
88 3300044712 Ga0453684_0001336 Ga0453684_0001336_31701_32471 240
89 3300044712 Ga0453684_0001446 Ga0453684_0001446_31089_31823 240
90 3300044712 Ga0453684_0090719 Ga0453684_0090719_2636_3364 240
91 3300049591 Ga0501075_0501662 Ga0501075_0501662_28_750 240
92 3300050507 nmdc:mga05p37_15709_c1 nmdc:mga05p37_15709_c1_3826_4548 240
93 3300050512 nmdc:mga0n895_172314_c1 nmdc:mga0n895_172314_c1_1066_1788 240
94 3300005331 Ga0070670_100173799 Ga0070670_1001737992 243
95 3300006871 Ga0075434_100003466 Ga0075434_10000346611 243
96 3300009147 Ga0114129_10683162 Ga0114129_106831622 243
97 3300050512 nmdc:mga0n895_3501_c1 nmdc:mga0n895_3501_c1_8700_9431 243
98 3300050515 nmdc:mga0a205_2354_c1 nmdc:mga0a205_2354_c1_9600_10331 243
99 3300009147 Ga0114129_10039993 Ga0114129_100399934 244
100 3300050507 nmdc:mga05p37_302068_c1 nmdc:mga05p37_302068_c1_47_844 244
101 3300006847 Ga0075431_100172722 Ga0075431_1001727223 245
102 3300006852 Ga0075433_10441414 Ga0075433_104414142 245
103 3300009094 Ga0111539_10268781 Ga0111539_102687813 245
104 3300050510 nmdc:mga06r32_375950_c1 nmdc:mga06r32_375950_c1_493_1239 245
105 3300050511 nmdc:mga08y16_281168_c1 nmdc:mga08y16_281168_c1_74_820 245
106 2162886012 MBSR1b_contig_13186264 MBSR1b_0841.00001710 249
107 3300005293 Ga0065715_10355670 Ga0065715_103556701 249
108 3300005335 Ga0070666_10433270 Ga0070666_104332701 249
109 3300005336 Ga0070680_100062139 Ga0070680_1000621393 249
110 3300005364 Ga0070673_100060566 Ga0070673_1000605663 249
111 3300005441 Ga0070700_100077874 Ga0070700_1000778741 249
112 3300005444 Ga0070694_100227073 Ga0070694_1002270732 249
113 3300005471 Ga0070698_100000410 Ga0070698_10000041032 249
114 3300005842 Ga0068858_100061706 Ga0068858_1000617063 249
115 3300005843 Ga0068860_100454599 Ga0068860_1004545992 249
116 3300006847 Ga0075431_100176561 Ga0075431_1001765613 249
117 3300009147 Ga0114129_10059296 Ga0114129_100592963 249
118 3300010375 Ga0105239_10166813 Ga0105239_101668132 249
119 3300013306 Ga0163162_10011804 Ga0163162_100118044 249
120 3300014326 Ga0157380_10052905 Ga0157380_100529052 249
121 3300025926 Ga0207659_10075847 Ga0207659_100758472 249
122 3300025960 Ga0207651_10054777 Ga0207651_100547772 249
123 3300026035 Ga0207703_10102961 Ga0207703_101029612 249
124 3300026075 Ga0207708_10065244 Ga0207708_100652441 249
125 3300028381 Ga0268264_10141767 Ga0268264_101417673 249
126 3300028381 Ga0268264_10630498 Ga0268264_106304982 249
127 3300049582 Ga0501048_0367325 Ga0501048_0367325_52_807 249
128 3300050507 nmdc:mga05p37_385355_c1 nmdc:mga05p37_385355_c1_129_884 249
129 3300050513 nmdc:mga0rr50_371729_c1 nmdc:mga0rr50_371729_c1_341_1090 249
130 3300061734 Ga0530510_0110647 Ga0530510_0110647_68_820 249

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03740

PdxJ

Pyridoxal phosphate biosynthesis protein PdxJ

25

264

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ixo-assembly3.cif.gz_A-2 enzyme-analogue substrate complex of pyridoxine 5'-phosphate synthase 0.9718 1 246
3f4n-assembly5.cif.gz_B crystal structure of pyridoxal phosphate biosynthetic protein pdxj from yersinia pestis 0.9703 4 248
3f4n-assembly2.cif.gz_C crystal structure of pyridoxal phosphate biosynthetic protein pdxj from yersinia pestis 0.9612 4 248
5dlc-assembly2.cif.gz_D x-ray crystal structure of a pyridoxine 5-prime-phosphate synthase from pseudomonas aeruginosa 0.9549 1 248
1ho1-assembly1.cif.gz_C crystal structure of pyridoxine 5'-phosphate synthase 0.9526 1 248
ID Description Score Start End Superfamily
3gk0A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9518 2 248 3.20.20.70
3o6cA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9093 3 246 3.20.20.70
3gk0A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9066 2 248 3.20.20.70
3o6cA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8883 3 246 3.20.20.70
2yw3A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7966 4 246 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A3S4I4N7-F1-model_v4 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.9999 177 246 GO:0005829
GO:0008615
GO:0033856
AF-A0A3B9TW44-F1-model_v4 Pyridoxine 5'-phosphate synthase 0.9941 4 90 GO:0005829
GO:0008615
GO:0033856
AF-A0A4Q5SB90-F1-model_v4 Pyridoxine 5'-phosphate synthase 0.9904 4 84 GO:0005829
GO:0008615
GO:0033856
AF-A0A7V3W116-F1-model_v4 Pyridoxine 5'-phosphate synthase 0.9899 3 93 GO:0005829
GO:0008615
GO:0033856
AF-A0A0B6X0N5-F1-model_v4 Pyridoxine 5'-phosphate synthase (PNP synthase) (EC 2.6.99.2) 0.9886 1 246 GO:0005829
GO:0008615
GO:0033856

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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