F141768

General Info

Members Datasets Scaffolds Average Seq Length
129 77 258 554

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10042009|Ga0157370_100420093
Length 578
Sequence VNLLDYLVLFSTMLGIAAYGIWRTRGRRDLHRYLKGDGNTRWFVIGLSVMATQASAITFLSTPGQGYESGLGFVQNYFGAPFALIIISIVFLPIYRRLNVYTAYEYLGKRFDGKTRLLGAGLFLLQRGLGAGITIYAPAIVLSTVMGWRLDLTIVLSGLVAIAYTVWGGSAAVNVTQKYQIGVIFIGMIAAFVVLLMKLPTDLRFTDSLALAGGFQKLNGVDYSLNVRSRYTFWSGLLGGMFLALSYFGTDQSQVQRYLTGASLRESRLGLMFNAVLKIPMQFFILLLGVLLFVFYQFQPPPVYFNDAAWNAELHGKSGASLRAIDQEFAAAHTARKDLIEKWVDARHSHNPTAEAHARDEAIAADARVQSIRQQARKALHDANPGASANDSDYMFISFIINFLPHGLIGLLVAVFFAAALSSKAAELNALGATTTIDIYRHLVNRQASDAHFVAASRLFTVFWGVVALGVALFANLVENLIQATNILGSIFYGVVLGLFLTAFFFKRVGGTAVFWGALAAQLLVFVLYFTLNISYLWYNVIGCAALIAFACAIQWVVKRSSIERRGFPAILENPQSS

Samples

Sample ID Description Type Environment
1 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
13 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
14 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
15 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
16 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
18 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
19 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
20 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
31 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
32 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
33 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
34 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
37 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
38 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
39 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
40 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
41 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
42 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
45 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
46 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
47 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
48 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
49 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
50 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
51 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
52 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
53 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
54 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
55 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
56 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
57 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
58 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
59 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
60 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
61 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
62 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
63 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
64 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
65 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
66 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
67 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
68 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
69 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
76 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.22
Metatranscriptomes 0.78
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 96.12
Stem 0
Stem Tuber 0
Unclassified 6.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157370_10042009 3300013104 Bacteria 4407
2 rootH2_10017314 3300003320 Bacteria 24162
3 rootL2_10232848 3300003322 Bacteria 3017
4 Ga0070694_100000430 3300005444 Bacteria 22877
5 Ga0070708_100072039 3300005445 Bacteria 3113
6 Ga0070679_100004480 3300005530 Bacteria 12898
7 Ga0070665_100000059 3300005548 Bacteria 224560
8 Ga0068856_100000160 3300005614 Bacteria 69926
9 Ga0068863_100028911 3300005841 Bacteria 5293
10 Ga0068860_100176327 3300005843 Bacteria 2066
11 Ga0070717_10001738 3300006028 Bacteria 15184
12 Ga0070712_100005048 3300006175 Bacteria 8174
13 Ga0075428_100068539 3300006844 Bacteria 3881
14 Ga0105240_10000108 3300009093 Bacteria 171434
15 Ga0105240_10190365 3300009093 Bacteria 2413
16 Ga0105247_10011097 3300009101 Bacteria 5433
17 Ga0114129_10109863 3300009147 Bacteria 3806
18 Ga0105238_10008393 3300009551 Bacteria 10334
19 Ga0105239_10004681 3300010375 Bacteria 16243
20 Ga0105239_10129877 3300010375 Bacteria 2801
21 Ga0213875_10000070 3300021388 Bacteria 120272
22 Ga0207710_10032445 3300025900 Unclassified 2287
23 Ga0207695_10000034 3300025913 Bacteria 496728
24 Ga0207695_10196465 3300025913 Bacteria 1933
25 Ga0207693_10005286 3300025915 Bacteria 10794
26 Ga0207652_10020666 3300025921 Bacteria 5425
27 Ga0207667_10083739 3300025949 Bacteria 3303
28 Ga0207712_10033662 3300025961 Bacteria 3466
29 Ga0207702_10132456 3300026078 Unclassified 2245
30 Ga0207674_10056491 3300026116 Bacteria 3986
31 Ga0207675_100027610 3300026118 Bacteria 5287
32 Ga0268266_10000033 3300028379 Bacteria 388374
33 Ga0265337_1000445 3300028556 Bacteria 21986
34 Ga0265337_1008340 3300028556 Bacteria 3775
35 Ga0265319_1000049 3300028563 Bacteria 98925
36 Ga0265319_1000533 3300028563 Bacteria 26038
37 Ga0265319_1002617 3300028563 Bacteria 9700
38 Ga0265334_10008038 3300028573 Bacteria 4503
39 Ga0265318_10000016 3300028577 Bacteria 184782
40 Ga0265318_10001565 3300028577 Bacteria 13289
41 Ga0265318_10004471 3300028577 Bacteria 6771
42 Ga0265336_10002024 3300028666 Bacteria 8648
43 Ga0265338_10000495 3300028800 Bacteria 70342
44 Ga0265338_10001849 3300028800 Bacteria 33240
45 Ga0265338_10005649 3300028800 Bacteria 16241
46 Ga0265338_10055711 3300028800 Bacteria 3515
47 Ga0265338_10072720 3300028800 Bacteria 2934
48 Ga0265324_10004177 3300029957 Bacteria 6607
49 Ga0265324_10010460 3300029957 Bacteria 3575
50 Ga0265760_10002258 3300031090 Bacteria 5636
51 Ga0265320_10000725 3300031240 Bacteria 25219
52 Ga0265320_10001346 3300031240 Bacteria 17923
53 Ga0265320_10001487 3300031240 Bacteria 17114
54 Ga0265320_10001561 3300031240 Bacteria 16482
55 Ga0265320_10002131 3300031240 Bacteria 13882
56 Ga0265320_10007381 3300031240 Bacteria 6827
57 Ga0265320_10016610 3300031240 Bacteria 4119
58 Ga0265320_10024304 3300031240 Bacteria 3207
59 Ga0265320_10030740 3300031240 Unclassified 2765
60 Ga0265320_10045218 3300031240 Bacteria 2164
61 Ga0265325_10005235 3300031241 Bacteria 8054
62 Ga0265340_10000564 3300031247 Bacteria 20575
63 Ga0265331_10024711 3300031250 Bacteria 3037
64 Ga0265327_10000032 3300031251 Bacteria 318763
65 Ga0265327_10000188 3300031251 Bacteria 130649
66 Ga0265327_10026421 3300031251 Bacteria 3362
67 Ga0265327_10030270 3300031251 Bacteria 3063
68 Ga0265316_10009610 3300031344 Bacteria 8886
69 Ga0265313_10000413 3300031595 Bacteria 45863
70 Ga0265313_10000905 3300031595 Bacteria 29781
71 Ga0265313_10005753 3300031595 Bacteria 9022
72 Ga0265313_10006331 3300031595 Bacteria 8421
73 Ga0265313_10010602 3300031595 Bacteria 5805
74 Ga0307508_10000116 3300031616 Bacteria 94844
75 Ga0265314_10000596 3300031711 Bacteria 45506
76 Ga0265314_10009921 3300031711 Bacteria 7984
77 Ga0265314_10010848 3300031711 Bacteria 7572
78 Ga0265314_10046021 3300031711 Bacteria 3081
79 Ga0265342_10060481 3300031712 Unclassified 2234
80 Ga0373933_0011081 3300035724 Bacteria 4956
81 Ga0373937_0007073 3300036401 Bacteria 9695
82 Ga0373937_0061598 3300036401 Unclassified 3449
83 Ga0436364_0070103 3300037853 Bacteria 509097
84 Ga0451577_0000017 3300042876 Bacteria 523453
85 Ga0451577_0001515 3300042876 Bacteria 30616
86 Ga0453683_0001276 3300044673 Bacteria 22339
87 Ga0453684_0011589 3300044712 Bacteria 14739
88 Ga0453684_0021335 3300044712 Bacteria 9686
89 Ga0453684_0077010 3300044712 Bacteria 4184
90 Ga0453684_0086841 3300044712 Bacteria 3880
91 Ga0451576_0000443 3300045051 Bacteria 94447
92 Ga0451576_0001225 3300045051 Bacteria 45502
93 Ga0451576_0048695 3300045051 Unclassified 4450
94 Ga0495592_0000045 3300046454 Bacteria 118163
95 Ga0495592_0018744 3300046454 Bacteria 5268
96 Ga0495629_0016309 3300046459 Bacteria 5330
97 Ga0495608_0039588 3300046511 Unclassified 3159
98 Ga0495618_0002205 3300046514 Bacteria 12740
99 Ga0495628_0000028 3300046516 Bacteria 126332
100 Ga0495628_0107740 3300046516 Bacteria 2145
101 Ga0495630_0009365 3300046517 Bacteria 7040
102 Ga0495652_0016125 3300046529 Bacteria 6684
103 Ga0495586_0000312 3300046535 Bacteria 30763
104 Ga0495586_0000351 3300046535 Bacteria 28823
105 Ga0495634_0000607 3300046642 Bacteria 34699
106 Ga0495634_0095465 3300046642 Unclassified 1926
107 Ga0495599_0016698 3300046678 Bacteria 4559
108 Ga0495613_0000430 3300046689 Bacteria 35890
109 Ga0495613_0023057 3300046689 Bacteria 4639
110 Ga0495674_0020238 3300047319 Bacteria 6162
111 Ga0495680_0083177 3300047322 Bacteria 2414
112 Ga0495675_0032941 3300047444 Bacteria 3306
113 Ga0501032_0000106 3300049569 Bacteria 71183
114 Ga0501032_0028606 3300049569 Bacteria 3828
115 Ga0501033_0025906 3300049570 Bacteria 4415
116 Ga0501034_0000789 3300049571 Bacteria 47088
117 Ga0501034_0023072 3300049571 Bacteria 6341
118 Ga0501034_0055032 3300049571 Bacteria 4004
119 Ga0501046_0006895 3300049580 Bacteria 10013
120 Ga0501047_0005571 3300049581 Bacteria 11857
121 Ga0501048_0023116 3300049582 Bacteria 4544
122 Ga0501083_0006985 3300049744 Bacteria 8011
123 Ga0501035_0003593 3300049822 Bacteria 14811
124 Ga0501035_0016393 3300049822 Bacteria 6835
125 Ga0501035_0034874 3300049822 Bacteria 4571
126 Ga0501044_0000307 3300049823 Bacteria 61638
127 Ga0501044_0000574 3300049823 Bacteria 44666
128 Ga0501044_0018728 3300049823 Bacteria 7415
129 Ga0501044_0028223 3300049823 Bacteria 5924
130 Ga0157370_10042009
131 rootH2_10017314
132 rootL2_10232848
133 Ga0070694_100000430
134 Ga0070708_100072039
135 Ga0070679_100004480
136 Ga0070665_100000059
137 Ga0068856_100000160
138 Ga0068863_100028911
139 Ga0068860_100176327
140 Ga0070717_10001738
141 Ga0070712_100005048
142 Ga0075428_100068539
143 Ga0105240_10000108
144 Ga0105240_10190365
145 Ga0105247_10011097
146 Ga0114129_10109863
147 Ga0105238_10008393
148 Ga0105239_10004681
149 Ga0105239_10129877
150 Ga0213875_10000070
151 Ga0207710_10032445
152 Ga0207695_10000034
153 Ga0207695_10196465
154 Ga0207693_10005286
155 Ga0207652_10020666
156 Ga0207667_10083739
157 Ga0207712_10033662
158 Ga0207702_10132456
159 Ga0207674_10056491
160 Ga0207675_100027610
161 Ga0268266_10000033
162 Ga0265337_1000445
163 Ga0265337_1008340
164 Ga0265319_1000049
165 Ga0265319_1000533
166 Ga0265319_1002617
167 Ga0265334_10008038
168 Ga0265318_10000016
169 Ga0265318_10001565
170 Ga0265318_10004471
171 Ga0265336_10002024
172 Ga0265338_10000495
173 Ga0265338_10001849
174 Ga0265338_10005649
175 Ga0265338_10055711
176 Ga0265338_10072720
177 Ga0265324_10004177
178 Ga0265324_10010460
179 Ga0265760_10002258
180 Ga0265320_10000725
181 Ga0265320_10001346
182 Ga0265320_10001487
183 Ga0265320_10001561
184 Ga0265320_10002131
185 Ga0265320_10007381
186 Ga0265320_10016610
187 Ga0265320_10024304
188 Ga0265320_10030740
189 Ga0265320_10045218
190 Ga0265325_10005235
191 Ga0265340_10000564
192 Ga0265331_10024711
193 Ga0265327_10000032
194 Ga0265327_10000188
195 Ga0265327_10026421
196 Ga0265327_10030270
197 Ga0265316_10009610
198 Ga0265313_10000413
199 Ga0265313_10000905
200 Ga0265313_10005753
201 Ga0265313_10006331
202 Ga0265313_10010602
203 Ga0307508_10000116
204 Ga0265314_10000596
205 Ga0265314_10009921
206 Ga0265314_10010848
207 Ga0265314_10046021
208 Ga0265342_10060481
209 Ga0373933_0011081
210 Ga0373937_0007073
211 Ga0373937_0061598
212 Ga0436364_0070103
213 Ga0451577_0000017
214 Ga0451577_0001515
215 Ga0453683_0001276
216 Ga0453684_0011589
217 Ga0453684_0021335
218 Ga0453684_0077010
219 Ga0453684_0086841
220 Ga0451576_0000443
221 Ga0451576_0001225
222 Ga0451576_0048695
223 Ga0495592_0000045
224 Ga0495592_0018744
225 Ga0495629_0016309
226 Ga0495608_0039588
227 Ga0495618_0002205
228 Ga0495628_0000028
229 Ga0495628_0107740
230 Ga0495630_0009365
231 Ga0495652_0016125
232 Ga0495586_0000312
233 Ga0495586_0000351
234 Ga0495634_0000607
235 Ga0495634_0095465
236 Ga0495599_0016698
237 Ga0495613_0000430
238 Ga0495613_0023057
239 Ga0495674_0020238
240 Ga0495680_0083177
241 Ga0495675_0032941
242 Ga0501032_0000106
243 Ga0501032_0028606
244 Ga0501033_0025906
245 Ga0501034_0000789
246 Ga0501034_0023072
247 Ga0501034_0055032
248 Ga0501046_0006895
249 Ga0501047_0005571
250 Ga0501048_0023116
251 Ga0501083_0006985
252 Ga0501035_0003593
253 Ga0501035_0016393
254 Ga0501035_0034874
255 Ga0501044_0000307
256 Ga0501044_0000574
257 Ga0501044_0018728
258 Ga0501044_0028223

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00474

SSF

Sodium:solute symporter family

376

521

0.93

PF00474

SSF

Sodium:solute symporter family

33

307

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5nva-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.9111 2 560
5nv9-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.9019 2 563
5nva-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.9018 2 560
5nv9-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.8947 2 563
7uv0-assembly1.cif.gz_A structure of the sodium/iodide symporter (nis) in complex with iodide and sodium 0.8215 2 561
ID Description Score Start End Superfamily
af_Q2G161_32_508_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.9263 29 561 1.20.1730.10
af_Q2G161_32_508_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8738 29 561 1.20.1730.10
af_P83740_46_534_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8448 40 556 1.20.1730.10
af_P16256_31_481_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8418 30 563 1.20.1730.10
af_Q1EHB4_32_596_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8352 25 560 1.20.1730.10
ID Description Score Start End GO Terms
AF-A0A362XK85-F1-model_v4 Sodium:solute symporter 0.9811 1 517 GO:0005886
GO:0006814
GO:0015293
AF-A0A7X5W6Y9-F1-model_v4 deleted 0.981 1 556
AF-A0A7V9SRH9-F1-model_v4 Sodium:solute symporter 0.9788 1 556 GO:0005886
GO:0006814
GO:0015293
AF-A0A3C0IE07-F1-model_v4 Sodium:solute symporter 0.9787 1 555 GO:0005886
GO:0006814
GO:0015293
AF-A0A5C6RVD9-F1-model_v4 Sodium:solute symporter 0.9783 1 557 GO:0005886
GO:0006814
GO:0015293

Map