F141614

General Info

Members Datasets Scaffolds Average Seq Length
129 89 258 290

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10409906|Ga0114129_104099063
Length 307
Sequence MTVDFPPATAEGSEAMARAAARLPENAAGDLYVDDTCIDCALCRQLAPRVFHRSARGLSYVHAQPSSEEDRGRSLMAVVACPTASIGTADRAGVRAASLRFPDPIAPDVEQCGYASADSYGASSYLIRRPRGNVLVDSPRAAGPLLRRIAERGGVRFMFLTHRDDVADHRAFRERFGCERILHAADVTAGTGAVERRIEGHDPVQIDQDLIAIPVPGHTRGSTALLYQETFLFTGDHLWGLEGRSGLGASRDVCWYSWTEQVRSLERLLDWRFSWVLPGHGSPYCAESPEAMQRDLRALLARARQIR

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
58 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
59 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
62 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
63 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
64 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
65 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
66 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
67 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
68 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
72 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
73 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
74 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
80 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
81 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
82 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
83 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
84 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
85 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
86 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
87 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
88 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
89 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.78
Rhizosphere 97.67
Stem 0
Stem Tuber 0
Unclassified 11.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10409906 3300009147 Bacteria 1785
2 Ga0070670_100107338 3300005331 Bacteria 2406
3 Ga0070680_100009696 3300005336 Bacteria 7408
4 Ga0070692_10024989 3300005345 Bacteria 2941
5 Ga0070675_100075108 3300005354 Bacteria 2809
6 Ga0070671_100001397 3300005355 Bacteria 18030
7 Ga0070659_100414258 3300005366 Bacteria 1139
8 Ga0070667_100326687 3300005367 Bacteria 1385
9 Ga0070711_100319309 3300005439 Bacteria 1240
10 Ga0070694_100042419 3300005444 Bacteria 3039
11 Ga0070708_100112415 3300005445 Bacteria 2505
12 Ga0070708_100171300 3300005445 Bacteria 2027
13 Ga0070708_100396946 3300005445 Unclassified 1300
14 Ga0070681_10003819 3300005458 Bacteria 14164
15 Ga0070707_100036133 3300005468 Bacteria 4714
16 Ga0070707_100160765 3300005468 Bacteria 2189
17 Ga0070698_100025965 3300005471 Bacteria 6102
18 Ga0070699_100114005 3300005518 Bacteria 2375
19 Ga0070679_100016085 3300005530 Bacteria 7207
20 Ga0070697_100026533 3300005536 Bacteria 4629
21 Ga0070672_100058491 3300005543 Bacteria 3030
22 Ga0070695_100013919 3300005545 Bacteria 4842
23 Ga0070695_100078959 3300005545 Unclassified 2171
24 Ga0070695_100207624 3300005545 Bacteria 1404
25 Ga0070704_100322723 3300005549 Bacteria 1294
26 Ga0068857_100015656 3300005577 Bacteria 6629
27 Ga0068859_100766577 3300005617 Bacteria 1053
28 Ga0068860_100051873 3300005843 Bacteria 3902
29 Ga0068860_100256885 3300005843 Unclassified 1702
30 Ga0068862_100005689 3300005844 Bacteria 10399
31 Ga0075428_100121737 3300006844 Bacteria 2841
32 Ga0075428_100316848 3300006844 Bacteria 1676
33 Ga0075431_100021421 3300006847 Bacteria 6611
34 Ga0075433_10037989 3300006852 Bacteria 4156
35 Ga0075433_10042782 3300006852 Bacteria 3932
36 Ga0075434_100004530 3300006871 Bacteria 12544
37 Ga0075434_100063631 3300006871 Bacteria 3672
38 Ga0075434_100094425 3300006871 Bacteria 2996
39 Ga0075434_100191759 3300006871 Bacteria 2064
40 Ga0075429_100005155 3300006880 Bacteria 11239
41 Ga0075429_100376905 3300006880 Bacteria 1242
42 Ga0075429_100464854 3300006880 Bacteria 1108
43 Ga0075436_100029914 3300006914 Bacteria 3747
44 Ga0097620_100766684 3300006931 Bacteria 1053
45 Ga0075435_100161734 3300007076 Unclassified 1886
46 Ga0075435_100360601 3300007076 Unclassified 1247
47 Ga0099794_10001097 3300007265 Bacteria 9256
48 Ga0105240_10001207 3300009093 Bacteria 45060
49 Ga0111539_10368810 3300009094 Bacteria 1671
50 Ga0114129_10005148 3300009147 Bacteria 18405
51 Ga0114129_10017627 3300009147 Bacteria 10166
52 Ga0114129_10028511 3300009147 Bacteria 7911
53 Ga0114129_10046007 3300009147 Bacteria 6133
54 Ga0114129_10058510 3300009147 Bacteria 5391
55 Ga0114129_10118525 3300009147 Bacteria 3646
56 Ga0105249_10013881 3300009553 Bacteria 7120
57 Ga0105239_10063513 3300010375 Unclassified 4054
58 Ga0157380_10196907 3300014326 Unclassified 1784
59 Ga0207684_10015955 3300025910 Bacteria 6456
60 Ga0207684_10232268 3300025910 Bacteria 1591
61 Ga0207707_10002587 3300025912 Bacteria 16213
62 Ga0207695_10000846 3300025913 Bacteria 56209
63 Ga0207660_10139657 3300025917 Bacteria 1851
64 Ga0207652_10002427 3300025921 Bacteria 15728
65 Ga0207646_10011489 3300025922 Bacteria 8571
66 Ga0207646_10057615 3300025922 Bacteria 3471
67 Ga0207646_10403694 3300025922 Unclassified 1234
68 Ga0207659_10085430 3300025926 Bacteria 2344
69 Ga0207644_10001956 3300025931 Bacteria 13333
70 Ga0207691_10118080 3300025940 Bacteria 2353
71 Ga0207689_10078287 3300025942 Bacteria 2717
72 Ga0207667_10198393 3300025949 Bacteria 2059
73 Ga0207658_10253394 3300025986 Bacteria 1497
74 Ga0207677_10303389 3300026023 Bacteria 1320
75 Ga0207678_10358798 3300026067 Bacteria 1258
76 Ga0207674_10064212 3300026116 Unclassified 3704
77 Ga0209588_1055283 3300027671 Bacteria 1283
78 Ga0268264_10005860 3300028381 Bacteria 10399
79 Ga0265338_10003975 3300028800 Bacteria 20350
80 Ga0265328_10001404 3300031239 Bacteria 11081
81 Ga0265320_10001759 3300031240 Bacteria 15351
82 Ga0265339_10003593 3300031249 Bacteria 10828
83 Ga0265339_10006882 3300031249 Bacteria 7408
84 Ga0265314_10010031 3300031711 Bacteria 7940
85 Ga0265342_10000731 3300031712 Bacteria 33812
86 Ga0373923_0002605 3300035111 Bacteria 5595
87 Ga0373923_0037799 3300035111 Bacteria 1976
88 Ga0373956_0013799 3300035119 Bacteria 3365
89 Ga0373943_0238378 3300035170 Bacteria 1018
90 Ga0373946_0060958 3300035171 Bacteria 1605
91 Ga0373955_0003455 3300035172 Bacteria 6942
92 Ga0373931_0053309 3300035691 Bacteria 2158
93 Ga0373933_0009962 3300035724 Bacteria 5202
94 Ga0373937_0014858 3300036401 Bacteria 6876
95 Ga0373937_0344196 3300036401 Bacteria 1412
96 Ga0373925_0278917 3300037068 Bacteria 1346
97 Ga0395905_0113346 3300037471 Unclassified 2547
98 Ga0436364_1403638 3300037853 Bacteria 1598
99 Ga0436363_1201768 3300039450 Unclassified 1890
100 Ga0451577_0038940 3300042876 Bacteria 4273
101 Ga0451577_0348119 3300042876 Bacteria 1344
102 Ga0453684_0006701 3300044712 Bacteria 21730
103 Ga0453684_0020126 3300044712 Bacteria 10097
104 Ga0466959_0083693 3300045049 Unclassified 2297
105 Ga0451576_0033386 3300045051 Bacteria 5470
106 Ga0451576_0059573 3300045051 Bacteria 3985
107 Ga0451576_0441204 3300045051 Bacteria 1366
108 Ga0495667_0037933 3300046559 Bacteria 3210
109 Ga0495604_0371646 3300047317 Bacteria 946
110 Ga0496112_0315748 3300048915 Bacteria 1507
111 nmdc:mga05p37_102891_c1 3300050507 Bacteria 3516
112 nmdc:mga05p37_118673_c1 3300050507 Unclassified 3250
113 nmdc:mga05p37_37812_c1 3300050507 Bacteria 5920
114 nmdc:mga05p37_83015_c1 3300050507 Bacteria 3948
115 nmdc:mga09592_420962_c1 3300050508 Bacteria 1154
116 nmdc:mga09592_7905_c1 3300050508 Bacteria 8640
117 nmdc:mga09592_80807_c1 3300050508 Bacteria 2768
118 nmdc:mga0qj67_134891_c1 3300050509 Bacteria 2000
119 nmdc:mga0qj67_244599_c1 3300050509 Bacteria 1455
120 nmdc:mga06r32_15729_c1 3300050510 Bacteria 6875
121 nmdc:mga08y16_302285_c1 3300050511 Bacteria 1649
122 nmdc:mga08y16_81270_c1 3300050511 Unclassified 3379
123 nmdc:mga0n895_277660_c1 3300050512 Bacteria 1699
124 nmdc:mga0n895_32744_c1 3300050512 Bacteria 4990
125 nmdc:mga0rr50_149483_c1 3300050513 Unclassified 1886
126 nmdc:mga0a205_19692_c1 3300050515 Bacteria 6367
127 nmdc:mga0a205_31185_c1 3300050515 Bacteria 5106
128 Ga0501082_0381849 3300060353 Bacteria 1229
129 Ga0501082_0584146 3300060353 Bacteria 977
130 Ga0114129_10409906
131 Ga0070670_100107338
132 Ga0070680_100009696
133 Ga0070692_10024989
134 Ga0070675_100075108
135 Ga0070671_100001397
136 Ga0070659_100414258
137 Ga0070667_100326687
138 Ga0070711_100319309
139 Ga0070694_100042419
140 Ga0070708_100112415
141 Ga0070708_100171300
142 Ga0070708_100396946
143 Ga0070681_10003819
144 Ga0070707_100036133
145 Ga0070707_100160765
146 Ga0070698_100025965
147 Ga0070699_100114005
148 Ga0070679_100016085
149 Ga0070697_100026533
150 Ga0070672_100058491
151 Ga0070695_100013919
152 Ga0070695_100078959
153 Ga0070695_100207624
154 Ga0070704_100322723
155 Ga0068857_100015656
156 Ga0068859_100766577
157 Ga0068860_100051873
158 Ga0068860_100256885
159 Ga0068862_100005689
160 Ga0075428_100121737
161 Ga0075428_100316848
162 Ga0075431_100021421
163 Ga0075433_10037989
164 Ga0075433_10042782
165 Ga0075434_100004530
166 Ga0075434_100063631
167 Ga0075434_100094425
168 Ga0075434_100191759
169 Ga0075429_100005155
170 Ga0075429_100376905
171 Ga0075429_100464854
172 Ga0075436_100029914
173 Ga0097620_100766684
174 Ga0075435_100161734
175 Ga0075435_100360601
176 Ga0099794_10001097
177 Ga0105240_10001207
178 Ga0111539_10368810
179 Ga0114129_10005148
180 Ga0114129_10017627
181 Ga0114129_10028511
182 Ga0114129_10046007
183 Ga0114129_10058510
184 Ga0114129_10118525
185 Ga0105249_10013881
186 Ga0105239_10063513
187 Ga0157380_10196907
188 Ga0207684_10015955
189 Ga0207684_10232268
190 Ga0207707_10002587
191 Ga0207695_10000846
192 Ga0207660_10139657
193 Ga0207652_10002427
194 Ga0207646_10011489
195 Ga0207646_10057615
196 Ga0207646_10403694
197 Ga0207659_10085430
198 Ga0207644_10001956
199 Ga0207691_10118080
200 Ga0207689_10078287
201 Ga0207667_10198393
202 Ga0207658_10253394
203 Ga0207677_10303389
204 Ga0207678_10358798
205 Ga0207674_10064212
206 Ga0209588_1055283
207 Ga0268264_10005860
208 Ga0265338_10003975
209 Ga0265328_10001404
210 Ga0265320_10001759
211 Ga0265339_10003593
212 Ga0265339_10006882
213 Ga0265314_10010031
214 Ga0265342_10000731
215 Ga0373923_0002605
216 Ga0373923_0037799
217 Ga0373956_0013799
218 Ga0373943_0238378
219 Ga0373946_0060958
220 Ga0373955_0003455
221 Ga0373931_0053309
222 Ga0373933_0009962
223 Ga0373937_0014858
224 Ga0373937_0344196
225 Ga0373925_0278917
226 Ga0395905_0113346
227 Ga0436364_1403638
228 Ga0436363_1201768
229 Ga0451577_0038940
230 Ga0451577_0348119
231 Ga0453684_0006701
232 Ga0453684_0020126
233 Ga0466959_0083693
234 Ga0451576_0033386
235 Ga0451576_0059573
236 Ga0451576_0441204
237 Ga0495667_0037933
238 Ga0495604_0371646
239 Ga0496112_0315748
240 nmdc:mga05p37_102891_c1
241 nmdc:mga05p37_118673_c1
242 nmdc:mga05p37_37812_c1
243 nmdc:mga05p37_83015_c1
244 nmdc:mga09592_420962_c1
245 nmdc:mga09592_7905_c1
246 nmdc:mga09592_80807_c1
247 nmdc:mga0qj67_134891_c1
248 nmdc:mga0qj67_244599_c1
249 nmdc:mga06r32_15729_c1
250 nmdc:mga08y16_302285_c1
251 nmdc:mga08y16_81270_c1
252 nmdc:mga0n895_277660_c1
253 nmdc:mga0n895_32744_c1
254 nmdc:mga0rr50_149483_c1
255 nmdc:mga0a205_19692_c1
256 nmdc:mga0a205_31185_c1
257 Ga0501082_0381849
258 Ga0501082_0584146

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13370

Fer4_13

4Fe-4S single cluster domain of Ferredoxin I

33

88

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1siz-assembly1.cif.gz_C crystal structure of the [fe3s4]-ferredoxin from the hyperthermophilic archaeon pyrococcus furiosus 0.9168 7 68
4dhv-assembly1.cif.gz_A crystal structure of the pyrococcus furiosus ferredoxin d14c variant containing the heterometallic [agfe3s4] cluster 0.893 7 68
3pni-assembly1.cif.gz_A crystal structure of d14c [3fe-4s] pyrococcus furiosus ferredoxin 0.8767 7 68
1vjw-assembly1.cif.gz_A structure of oxidoreductase (nadp+(a),ferredoxin(a)) 0.8724 7 67
1fxd-assembly1.cif.gz_A-2 refined crystal structure of ferredoxin ii from desulfovibrio gigas at 1.7 angstroms 0.8592 7 64
ID Description Score Start End Superfamily
af_Q8RWE1_65_123_3.30.70.20 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9673 8 67 3.30.70.20
af_Q8RWE1_144_338_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9563 86 278 3.60.15.10
af_Q8RWE1_65_123_3.30.70.20 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.936 8 67 3.30.70.20
af_Q8RWE1_144_338_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9325 86 278 3.60.15.10
1sizA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9203 7 68 3.30.70.20
ID Description Score Start End GO Terms
AF-A0A832HRI1-F1-model_v4 Ferredoxin 1.007 2 66
AF-A0A6N6PZY6-F1-model_v4 Ferredoxin 1.006 2 66
AF-A0A2D5MTB6-F1-model_v4 Ferredoxin 1.006 2 66
AF-A0A6G6JY25-F1-model_v4 Ferredoxin 1.006 2 66
AF-A0A1J4VHX8-F1-model_v4 Ferredoxin 1.005 2 66

Map