F138883

General Info

Members Datasets Scaffolds Average Seq Length
128 93 256 263

Family's Representative Sequence

Representative Sequence 3300041443|Ga0451789_0739093|Ga0451789_0739093_65_910
Length 281
Sequence MTSETTSLSANNDADAPREDRPLAVVTGASSGIGLELARQFVNHHFDLIVAAEDAEIAVAAAVLRAESSGQVEHVQVDLRDEQGVADLYARIRADGRPLAAIALNAGHGQGGAFIDTDLADELSIIDLNITSTVRLAKLVLRDMVAADEGRVLVTSSIASTMPGSFQAVYNASKSFLQSFTEALQDELKDTGVTLTSLMPGPTETDFFERADMAEDTKVGTSKKDDPAQVAQQGFEALMAGKARVVGGGLKTKVQEAAGKAMPDKLKAAMHRSMAEPGSGG

Samples

Sample ID Description Type Environment
1 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
2 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
33 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
48 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
49 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
50 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
51 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
52 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
53 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
54 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
55 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
56 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
57 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
58 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
59 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
60 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
61 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
62 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
63 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
67 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
68 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
73 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
74 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
84 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
85 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
86 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
87 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
88 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
89 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
90 2643221641 Nocardioides sp. Root122 Isolate Unclassified
91 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
92 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
93 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.75
Metatranscriptomes 3.12
Isolates 3.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.69
Nodule 0
Rhizoplane 3.91
Rhizosphere 82.03
Stem 0
Stem Tuber 0
Unclassified 2.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451789_0739093 3300041443 Bacteria 1010
2 Ga0006777J48905_1033588 3300003308 Bacteria 1476
3 Ga0007429J51699_1039023 3300003579 Bacteria 1869
4 Ga0032354_1033783 3300003693 Bacteria 1490
5 Ga0070658_10000037 3300005327 Bacteria 141493
6 Ga0070677_10000676 3300005333 Bacteria 11429
7 Ga0070666_10009240 3300005335 Bacteria 6143
8 Ga0070660_100000617 3300005339 Bacteria 23758
9 Ga0070692_10010565 3300005345 Bacteria 4209
10 Ga0070659_100013820 3300005366 Bacteria 6022
11 Ga0070667_100007930 3300005367 Bacteria 8806
12 Ga0070714_100828203 3300005435 Bacteria 897
13 Ga0070685_10000012 3300005466 Bacteria 128823
14 Ga0070665_100002291 3300005548 Bacteria 21281
15 Ga0068854_100616578 3300005578 Bacteria 928
16 Ga0068856_100376968 3300005614 Bacteria 1438
17 Ga0068852_100114157 3300005616 Bacteria 2461
18 Ga0068859_100445517 3300005617 Bacteria 1391
19 Ga0068858_100178747 3300005842 Bacteria 2003
20 Ga0075365_10232225 3300006038 Bacteria 1295
21 Ga0075363_100072130 3300006048 Bacteria 1877
22 Ga0075362_10028604 3300006177 Bacteria 2395
23 Ga0075369_10041784 3300006186 Bacteria 1964
24 Ga0097620_100445469 3300006931 Bacteria 1391
25 Ga0111539_10894359 3300009094 Unclassified 1033
26 Ga0105239_11004302 3300010375 Bacteria 959
27 Ga0157369_10005210 3300013105 Bacteria 15193
28 Ga0157369_10289086 3300013105 Bacteria 1707
29 Ga0157372_10968509 3300013307 Bacteria 986
30 Ga0163163_10216401 3300014325 Bacteria 1965
31 Ga0206353_11835034 3300020082 Bacteria 2259
32 Ga0213876_10000628 3300021384 Bacteria 25724
33 Ga0213875_10000325 3300021388 Bacteria 45288
34 Ga0213875_10039463 3300021388 Unclassified 2224
35 Ga0207680_10001792 3300025903 Bacteria 10142
36 Ga0207705_10000008 3300025909 Bacteria 589717
37 Ga0207657_10000867 3300025919 Bacteria 31897
38 Ga0207690_10002879 3300025932 Bacteria 10367
39 Ga0207640_10114273 3300025981 Bacteria 1921
40 Ga0207658_10005444 3300025986 Bacteria 8730
41 Ga0207677_10040510 3300026023 Bacteria 3072
42 Ga0207703_10125397 3300026035 Bacteria 2210
43 Ga0207702_10188455 3300026078 Bacteria 1904
44 Ga0207702_10583264 3300026078 Bacteria 1096
45 Ga0207698_10138759 3300026142 Bacteria 2090
46 Ga0268266_10001725 3300028379 Bacteria 25033
47 Ga0265327_10003610 3300031251 Bacteria 14572
48 Ga0265342_10136666 3300031712 Bacteria 1370
49 Ga0307409_100032735 3300031995 Bacteria 3774
50 Ga0395898_0113171 3300037466 Bacteria 2601
51 Ga0436364_0091919 3300037853 Bacteria 2115
52 Ga0436364_0315625 3300037853 Bacteria 3625
53 Ga0436364_1130831 3300037853 Bacteria 43198
54 Ga0436364_1149794 3300037853 Bacteria 788
55 Ga0436364_1335652 3300037853 Bacteria 9811
56 Ga0436365_1654841 3300039437 Bacteria 47529
57 Ga0436365_1750188 3300039437 Bacteria 5072
58 Ga0436360_0725790 3300039438 Bacteria 1327
59 Ga0436361_0182747 3300039447 Bacteria 1141
60 Ga0436362_0054243 3300039453 Bacteria 1755
61 Ga0439466_0004494 3300041411 Bacteria 5362
62 Ga0439465_0000542 3300041413 Bacteria 11332
63 Ga0451843_1369882 3300041509 Bacteria 1233
64 Ga0466969_0108864 3300044656 Bacteria 1299
65 Ga0466965_0001495 3300044683 Bacteria 9475
66 Ga0466966_0004421 3300044684 Bacteria 9272
67 Ga0466966_0011168 3300044684 Bacteria 5957
68 Ga0466966_0014325 3300044684 Bacteria 5250
69 Ga0466966_0237660 3300044684 Bacteria 1099
70 Ga0466961_0006975 3300044693 Bacteria 7184
71 Ga0466963_0003993 3300044694 Bacteria 8534
72 Ga0466963_0115690 3300044694 Bacteria 1843
73 Ga0466963_0274361 3300044694 Bacteria 1185
74 Ga0466963_0399542 3300044694 Bacteria 969
75 Ga0466964_0187239 3300044706 Bacteria 985
76 Ga0466971_0007625 3300044719 Bacteria 4718
77 Ga0466968_0092146 3300044735 Bacteria 1344
78 Ga0466970_0064753 3300044765 Bacteria 1961
79 Ga0466970_0069526 3300044765 Bacteria 1893
80 Ga0466957_0042910 3300044842 Bacteria 2737
81 Ga0466957_0055033 3300044842 Bacteria 2431
82 Ga0466957_0368791 3300044842 Bacteria 977
83 Ga0466960_0058028 3300044901 Bacteria 1889
84 Ga0466960_0087914 3300044901 Bacteria 1579
85 Ga0466959_0014256 3300045049 Bacteria 5769
86 Ga0466959_0016855 3300045049 Bacteria 5347
87 Ga0466959_0130387 3300045049 Bacteria 1782
88 Ga0466958_0000681 3300045836 Bacteria 14756
89 Ga0466958_0002565 3300045836 Bacteria 9171
90 Ga0466958_0022267 3300045836 Bacteria 3710
91 Ga0466958_0132337 3300045836 Bacteria 1567
92 Ga0466958_0252506 3300045836 Bacteria 1128
93 Ga0466967_0003718 3300045976 Bacteria 10054
94 Ga0466967_0009318 3300045976 Bacteria 7275
95 Ga0466967_0031749 3300045976 Bacteria 4452
96 Ga0466967_0269682 3300045976 Bacteria 1631
97 Ga0466967_0295276 3300045976 Bacteria 1558
98 Ga0466967_0463042 3300045976 Bacteria 1240
99 Ga0466967_0659337 3300045976 Bacteria 1035
100 Ga0466967_0730006 3300045976 Bacteria 982
101 Ga0466967_1001620 3300045976 Bacteria 832
102 Ga0495656_0223874 3300046615 Bacteria 942
103 Ga0496108_0381805 3300048911 Bacteria 1230
104 Ga0496109_0184904 3300048912 Bacteria 1958
105 Ga0496113_0320733 3300048916 Bacteria 1242
106 Ga0496113_0495865 3300048916 Bacteria 981
107 Ga0501031_0122090 3300049568 Unclassified 1702
108 Ga0501033_0092273 3300049570 Bacteria 2215
109 Ga0501034_0011140 3300049571 Bacteria 9331
110 Ga0501036_0197624 3300049572 Bacteria 1692
111 Ga0501038_0213705 3300049574 Bacteria 1542
112 Ga0501040_0036384 3300049576 Bacteria 3341
113 Ga0501040_0413932 3300049576 Bacteria 969
114 Ga0501042_0221599 3300049578 Bacteria 1364
115 Ga0501046_0178792 3300049580 Bacteria 1588
116 Ga0501048_0065417 3300049582 Bacteria 2571
117 Ga0501077_0103599 3300049593 Bacteria 1803
118 Ga0501081_0088694 3300049743 Bacteria 2173
119 Ga0501035_0236325 3300049822 Bacteria 1556
120 nmdc:mga03683_39271_c1 3300050489 Bacteria 1937
121 nmdc:mga03n38_44686_c1 3300050490 Bacteria 1947
122 Ga0501082_0115564 3300060353 Bacteria 2324
123 Ga0466962_0008674 3300061719 Bacteria 4875
124 Ga0466962_0112555 3300061719 Bacteria 1311
125 2644229908 2643221641 Bacteria 4490190
126 2799184872 2799112218 Bacteria 4315149
127 3000405874 3000405567 Bacteria 3779330
128 8054164424 8054160619 Bacteria 7783213
129 Ga0451789_0739093
130 Ga0006777J48905_1033588
131 Ga0007429J51699_1039023
132 Ga0032354_1033783
133 Ga0070658_10000037
134 Ga0070677_10000676
135 Ga0070666_10009240
136 Ga0070660_100000617
137 Ga0070692_10010565
138 Ga0070659_100013820
139 Ga0070667_100007930
140 Ga0070714_100828203
141 Ga0070685_10000012
142 Ga0070665_100002291
143 Ga0068854_100616578
144 Ga0068856_100376968
145 Ga0068852_100114157
146 Ga0068859_100445517
147 Ga0068858_100178747
148 Ga0075365_10232225
149 Ga0075363_100072130
150 Ga0075362_10028604
151 Ga0075369_10041784
152 Ga0097620_100445469
153 Ga0111539_10894359
154 Ga0105239_11004302
155 Ga0157369_10005210
156 Ga0157369_10289086
157 Ga0157372_10968509
158 Ga0163163_10216401
159 Ga0206353_11835034
160 Ga0213876_10000628
161 Ga0213875_10000325
162 Ga0213875_10039463
163 Ga0207680_10001792
164 Ga0207705_10000008
165 Ga0207657_10000867
166 Ga0207690_10002879
167 Ga0207640_10114273
168 Ga0207658_10005444
169 Ga0207677_10040510
170 Ga0207703_10125397
171 Ga0207702_10188455
172 Ga0207702_10583264
173 Ga0207698_10138759
174 Ga0268266_10001725
175 Ga0265327_10003610
176 Ga0265342_10136666
177 Ga0307409_100032735
178 Ga0395898_0113171
179 Ga0436364_0091919
180 Ga0436364_0315625
181 Ga0436364_1130831
182 Ga0436364_1149794
183 Ga0436364_1335652
184 Ga0436365_1654841
185 Ga0436365_1750188
186 Ga0436360_0725790
187 Ga0436361_0182747
188 Ga0436362_0054243
189 Ga0439466_0004494
190 Ga0439465_0000542
191 Ga0451843_1369882
192 Ga0466969_0108864
193 Ga0466965_0001495
194 Ga0466966_0004421
195 Ga0466966_0011168
196 Ga0466966_0014325
197 Ga0466966_0237660
198 Ga0466961_0006975
199 Ga0466963_0003993
200 Ga0466963_0115690
201 Ga0466963_0274361
202 Ga0466963_0399542
203 Ga0466964_0187239
204 Ga0466971_0007625
205 Ga0466968_0092146
206 Ga0466970_0064753
207 Ga0466970_0069526
208 Ga0466957_0042910
209 Ga0466957_0055033
210 Ga0466957_0368791
211 Ga0466960_0058028
212 Ga0466960_0087914
213 Ga0466959_0014256
214 Ga0466959_0016855
215 Ga0466959_0130387
216 Ga0466958_0000681
217 Ga0466958_0002565
218 Ga0466958_0022267
219 Ga0466958_0132337
220 Ga0466958_0252506
221 Ga0466967_0003718
222 Ga0466967_0009318
223 Ga0466967_0031749
224 Ga0466967_0269682
225 Ga0466967_0295276
226 Ga0466967_0463042
227 Ga0466967_0659337
228 Ga0466967_0730006
229 Ga0466967_1001620
230 Ga0495656_0223874
231 Ga0496108_0381805
232 Ga0496109_0184904
233 Ga0496113_0320733
234 Ga0496113_0495865
235 Ga0501031_0122090
236 Ga0501033_0092273
237 Ga0501034_0011140
238 Ga0501036_0197624
239 Ga0501038_0213705
240 Ga0501040_0036384
241 Ga0501040_0413932
242 Ga0501042_0221599
243 Ga0501046_0178792
244 Ga0501048_0065417
245 Ga0501077_0103599
246 Ga0501081_0088694
247 Ga0501035_0236325
248 nmdc:mga03683_39271_c1
249 nmdc:mga03n38_44686_c1
250 Ga0501082_0115564
251 Ga0466962_0008674
252 Ga0466962_0112555
253 2644229908
254 2799184872
255 3000405874
256 8054164424

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

22

216

0.95

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

28

233

0.91

PF08659

KR

KR domain

23

202

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7e28-assembly1.cif.gz_B crystal structure of sdr family nad(p)-dependent oxidoreductase from exiguobacterium 0.9242 7 233
7e24-assembly2.cif.gz_C crystal structure of sdr family nad(p)-dependent oxidoreductase from exiguobacterium 0.9215 8 233
7e3x-assembly1.cif.gz_B crystal structure of sdr family nad(p)-dependent oxidoreductase from exiguobacterium 0.9206 8 235
8g93-assembly1.cif.gz_A crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9192 7 244
8g93-assembly1.cif.gz_B crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9188 7 247
ID Description Score Start End Superfamily
af_Q10782_3_250_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9402 7 249 3.40.50.720
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9366 92 190 3.40.50.720
af_Q54CD7_32_271_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9233 7 222 3.40.50.720
af_Q8SX47_51_284_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9074 8 228 3.40.50.720
af_Q10782_3_250_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9072 7 249 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A656KVA4-F1-model_v4 deleted 0.9868 85 263
AF-A0A560E2F4-F1-model_v4 Short-subunit dehydrogenase 0.9853 31 261 GO:0016020
GO:0016491
AF-A0A848FFC4-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.985 2 261 GO:0016020
GO:0016491
AF-A0A1I1KE30-F1-model_v4 Short-chain dehydrogenase 0.9838 2 263 GO:0016020
GO:0016491
AF-A0A434R1G6-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9838 4 221 GO:0016491

Map