F135345

General Info

Members Datasets Scaffolds Average Seq Length
127 96 119 218

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0151273|Ga0466963_0151273_334_1104
Length 256
Sequence MPGDCGGAPRYGFRIWLLGHPAFSDEERHGHYAQEDSVRLLLTSGGITNASIQNALVDLLGKPIAESVALCIPTAQWGHPMCGPVSVRGFVSGVSPWGGMTSMEWKSLGVLELTALPTAGAERWVPWVRAADVLLVDGGDATYLCHWMRESGLADLLPSLPDTVWVGVSAGSMVMTPRVGADFVEWESAPDDRTLGVVDFSIFPHLDVFPENTMSDAERWAADIASRAYAIDDQTAIKVANGTVEVVSEGRWKLFP

Samples

Sample ID Description Type Environment
1 2643221597 Microbacterium sp. Root180 Isolate Unclassified
2 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
3 2643221711 Terrabacter sp. Root85 Isolate Unclassified
4 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
5 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
6 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
7 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
22 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
23 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
25 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
39 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
40 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
41 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
42 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
43 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
44 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
45 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
46 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
47 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
48 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
49 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
50 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
51 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
52 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
53 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
54 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
55 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
56 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
57 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
58 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
59 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
60 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
61 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
62 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
63 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
64 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
65 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
66 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
67 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
68 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
69 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
70 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
71 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
72 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
73 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
74 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
75 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
76 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
77 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
78 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
79 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
80 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
81 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
82 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
83 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
84 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
85 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
86 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
91 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
92 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
93 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
94 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
95 649633069 Micromonospora sp. L5 Isolate Unclassified
96 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.13
Metatranscriptomes 1.57
Isolates 6.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.94
Nodule 0.79
Rhizoplane 17.32
Rhizosphere 70.87
Stem 0
Stem Tuber 0
Unclassified 7.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10062677 3300001990 Bacteria 1117
2 Ga0070680_100332914 3300005336 Bacteria 1290
3 Ga0070714_100096890 3300005435 Bacteria 2592
4 Ga0070713_100088249 3300005436 Bacteria 2661
5 Ga0070710_10066451 3300005437 Bacteria 2067
6 Ga0070707_100164165 3300005468 Bacteria 2164
7 Ga0070679_100035441 3300005530 Bacteria 4951
8 Ga0070684_100277684 3300005535 Bacteria 1534
9 Ga0068856_100050414 3300005614 Bacteria 4103
10 Ga0068852_100005287 3300005616 Bacteria 9217
11 Ga0081539_10010315 3300005985 Bacteria 7612
12 Ga0075365_10353880 3300006038 Bacteria 1035
13 Ga0075370_10472869 3300006353 Bacteria 755
14 Ga0105248_10190711 3300009177 Bacteria 2310
15 Ga0157372_10016027 3300013307 Bacteria 8039
16 Ga0182007_10048230 3300015262 Bacteria 1407
17 Ga0206353_11087691 3300020082 Bacteria 987
18 Ga0206353_11344247 3300020082 Bacteria 740
19 Ga0209758_1070420 3300025297 Bacteria 1103
20 Ga0207692_10048712 3300025898 Bacteria 2135
21 Ga0207647_10240526 3300025904 Bacteria 1039
22 Ga0207684_10448925 3300025910 Bacteria 1107
23 Ga0207693_10078448 3300025915 Bacteria 2585
24 Ga0207660_10504687 3300025917 Bacteria 981
25 Ga0207652_10280583 3300025921 Bacteria 1503
26 Ga0207700_10094054 3300025928 Bacteria 2374
27 Ga0207664_10062925 3300025929 Bacteria 2964
28 Ga0207661_10231813 3300025944 Bacteria 1635
29 Ga0207676_10079526 3300026095 Bacteria 2659
30 Ga0207674_10292556 3300026116 Bacteria 1577
31 Ga0207698_10013544 3300026142 Bacteria 5386
32 Ga0268266_10022723 3300028379 Bacteria 5340
33 Ga0307517_10284132 3300028786 Bacteria 941
34 Ga0307406_10134295 3300031901 Bacteria 1742
35 Ga0451797_0186588 3300041453 Bacteria 1106
36 Ga0451853_3602683 3300041512 Bacteria 5358
37 Ga0466965_0027225 3300044683 Bacteria 2774
38 Ga0466966_0122461 3300044684 Bacteria 1597
39 Ga0466961_0085000 3300044693 Bacteria 2001
40 Ga0466961_0153131 3300044693 Bacteria 1439
41 Ga0466963_0030964 3300044694 Bacteria 3456
42 Ga0466963_0138801 3300044694 Bacteria 1683
43 Ga0466963_0151273 3300044694 Bacteria 1611
44 Ga0466963_0265335 3300044694 Bacteria 1206
45 Ga0466963_0343950 3300044694 Bacteria 1050
46 Ga0466963_0515949 3300044694 Bacteria 844
47 Ga0466964_0131295 3300044706 Bacteria 1141
48 Ga0453684_0005662 3300044712 Bacteria 24532
49 Ga0466971_0261460 3300044719 Bacteria 826
50 Ga0466957_0157022 3300044842 Bacteria 1475
51 Ga0466960_0020936 3300044901 Bacteria 2905
52 Ga0466959_0103150 3300045049 Bacteria 2041
53 Ga0466959_0123349 3300045049 Bacteria 1840
54 Ga0466959_0295812 3300045049 Bacteria 1109
55 Ga0466959_0527469 3300045049 Bacteria 797
56 Ga0466959_0529124 3300045049 Bacteria 796
57 Ga0466958_0025154 3300045836 Bacteria 3508
58 Ga0466967_0118327 3300045976 Bacteria 2444
59 Ga0466967_0385262 3300045976 Bacteria 1362
60 Ga0466967_1567111 3300045976 Bacteria 656
61 Ga0495603_0050583 3300046455 Bacteria 2471
62 Ga0495605_0164264 3300046474 Bacteria 984
63 Ga0495605_0196625 3300046474 Bacteria 880
64 Ga0495620_0031858 3300046515 Bacteria 2409
65 Ga0495632_0017339 3300046519 Bacteria 3979
66 Ga0495652_0389916 3300046529 Bacteria 989
67 Ga0495640_0129468 3300046533 Bacteria 1634
68 Ga0495597_0168681 3300046542 Bacteria 890
69 Ga0495625_0106794 3300046660 Bacteria 1917
70 Ga0495625_0495257 3300046660 Bacteria 748
71 Ga0495635_0349049 3300046663 Bacteria 987
72 Ga0495659_0218334 3300046664 Bacteria 787
73 Ga0495657_0267652 3300046675 Bacteria 1025
74 Ga0495613_0139096 3300046689 Bacteria 1736
75 Ga0495613_0207858 3300046689 Bacteria 1377
76 Ga0495670_0215390 3300046691 Bacteria 1019
77 Ga0495649_0002665 3300046694 Bacteria 12438
78 Ga0495649_0030346 3300046694 Bacteria 2986
79 Ga0495600_0036026 3300046809 Bacteria 3215
80 Ga0495600_0083575 3300046809 Bacteria 2084
81 Ga0495581_0181376 3300047315 Bacteria 1231
82 Ga0495581_0292572 3300047315 Bacteria 952
83 Ga0495672_0035018 3300047320 Bacteria 3095
84 Ga0495676_0081194 3300047321 Bacteria 2458
85 Ga0495683_0176186 3300047323 Bacteria 980
86 Ga0495687_001198 3300047443 Bacteria 24832
87 Ga0495687_011191 3300047443 Bacteria 4842
88 Ga0495687_015688 3300047443 Bacteria 3842
89 Ga0495675_0094653 3300047444 Bacteria 1873
90 Ga0495593_0041276 3300047673 Bacteria 2481
91 Ga0496100_0066377 3300048903 Bacteria 2393
92 Ga0496100_0081392 3300048903 Bacteria 2188
93 Ga0496101_0029252 3300048904 Bacteria 3853
94 Ga0496101_0054173 3300048904 Bacteria 2896
95 Ga0496101_0489780 3300048904 Bacteria 971
96 Ga0496102_0003154 3300048905 Bacteria 13980
97 Ga0496102_0659305 3300048905 Bacteria 970
98 Ga0496103_0226802 3300048906 Bacteria 1201
99 Ga0496104_0001045 3300048907 Bacteria 23660
100 Ga0496104_0521620 3300048907 Bacteria 1099
101 Ga0496105_0008182 3300048908 Bacteria 8128
102 Ga0496105_0407753 3300048908 Bacteria 1078
103 Ga0496106_0452396 3300048909 Bacteria 1031
104 Ga0496107_0401004 3300048910 Bacteria 1020
105 Ga0496110_0038472 3300048913 Bacteria 4163
106 Ga0496111_0009411 3300048914 Bacteria 6518
107 Ga0496111_0061737 3300048914 Bacteria 2717
108 Ga0496112_0384318 3300048915 Bacteria 1345
109 Ga0496112_0672111 3300048915 Bacteria 964
110 Ga0496114_0014844 3300048917 Bacteria 6260
111 Ga0496114_0611300 3300048917 Bacteria 961
112 Ga0496124_0149113 3300048927 Bacteria 1837
113 Ga0496124_0224735 3300048927 Bacteria 1409
114 Ga0501040_0225498 3300049576 Bacteria 1334
115 Ga0501074_0459307 3300049590 Bacteria 903
116 Ga0495612_0004879 3300053078 Bacteria 5552
117 Ga0500658_0005659 3300053134 Bacteria 4650
118 Ga0500600_0280791 3300053149 Bacteria 726
119 Ga0466962_0108874 3300061719 Bacteria 1333

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044719 Ga0466971_0261460 Ga0466971_0261460_29_562 176
2 3300045976 Ga0466967_1567111 Ga0466967_1567111_81_614 176
3 3300053149 Ga0500600_0280791 Ga0500600_0280791_116_652 176
4 3300025297 Ga0209758_1070420 Ga0209758_10704201 202
5 3300046474 Ga0495605_0164264 Ga0495605_0164264_76_735 202
6 3300046515 Ga0495620_0031858 Ga0495620_0031858_1504_2166 202
7 3300046542 Ga0495597_0168681 Ga0495597_0168681_70_738 202
8 3300046675 Ga0495657_0267652 Ga0495657_0267652_190_849 202
9 3300046689 Ga0495613_0207858 Ga0495613_0207858_434_1096 202
10 3300046694 Ga0495649_0030346 Ga0495649_0030346_409_1071 202
11 3300047315 Ga0495581_0181376 Ga0495581_0181376_478_1140 202
12 3300047321 Ga0495676_0081194 Ga0495676_0081194_247_909 202
13 3300047323 Ga0495683_0176186 Ga0495683_0176186_50_712 202
14 3300047443 Ga0495687_015688 Ga0495687_015688_2916_3578 202
15 3300047673 Ga0495593_0041276 Ga0495593_0041276_222_884 202
16 3300044683 Ga0466965_0027225 Ga0466965_0027225_916_1575 207
17 3300044693 Ga0466961_0085000 Ga0466961_0085000_232_891 207
18 3300044901 Ga0466960_0020936 Ga0466960_0020936_392_1051 207
19 3300045049 Ga0466959_0529124 Ga0466959_0529124_27_689 208
20 3300044694 Ga0466963_0265335 Ga0466963_0265335_453_1085 210
21 3300044712 Ga0453684_0005662 Ga0453684_0005662_824_1459 210
22 3300046664 Ga0495659_0218334 Ga0495659_0218334_97_732 210
23 3300046691 Ga0495670_0215390 Ga0495670_0215390_23_655 210
24 3300046455 Ga0495603_0050583 Ga0495603_0050583_196_858 212
25 iso_pu_bacteria 2929219909 2929223654 212
26 iso_pu_bacteria 649633069 649815793 212
27 iso_pu_bacteria 2818991469 2819728239 213
28 3300046689 Ga0495613_0139096 Ga0495613_0139096_320_964 214
29 3300049590 Ga0501074_0459307 Ga0501074_0459307_195_857 214
30 iso_pu_bacteria 8055412473 8055412524 214
31 iso_pu_bacteria 2643221597 2643994908 215
32 iso_pu_bacteria 2643221690 2644506017 215
33 iso_pu_bacteria 2643221711 2644609341 215
34 iso_pu_bacteria 2884994152 2884994164 215
35 3300005435 Ga0070714_100096890 Ga0070714_1000968902 216
36 3300005436 Ga0070713_100088249 Ga0070713_1000882492 216
37 3300005437 Ga0070710_10066451 Ga0070710_100664512 216
38 3300025898 Ga0207692_10048712 Ga0207692_100487122 216
39 3300025915 Ga0207693_10078448 Ga0207693_100784482 216
40 3300025928 Ga0207700_10094054 Ga0207700_100940542 216
41 3300025929 Ga0207664_10062925 Ga0207664_100629252 216
42 3300045049 Ga0466959_0527469 Ga0466959_0527469_58_711 216
43 3300048908 Ga0496105_0407753 Ga0496105_0407753_100_753 216
44 3300005468 Ga0070707_100164165 Ga0070707_1001641652 218
45 3300005985 Ga0081539_10010315 Ga0081539_100103156 218
46 3300006353 Ga0075370_10472869 Ga0075370_104728691 218
47 3300025910 Ga0207684_10448925 Ga0207684_104489251 218
48 3300028786 Ga0307517_10284132 Ga0307517_102841322 218
49 3300031901 Ga0307406_10134295 Ga0307406_101342953 218
50 3300041453 Ga0451797_0186588 Ga0451797_0186588_159_824 218
51 3300041512 Ga0451853_3602683 Ga0451853_3602683_4111_4776 218
52 3300044694 Ga0466963_0030964 Ga0466963_0030964_2202_2858 218
53 3300044694 Ga0466963_0515949 Ga0466963_0515949_38_706 218
54 3300049576 Ga0501040_0225498 Ga0501040_0225498_393_1052 218
55 3300053134 Ga0500658_0005659 Ga0500658_0005659_898_1557 218
56 3300005336 Ga0070680_100332914 Ga0070680_1003329141 219
57 3300005530 Ga0070679_100035441 Ga0070679_1000354414 219
58 3300005535 Ga0070684_100277684 Ga0070684_1002776843 219
59 3300005614 Ga0068856_100050414 Ga0068856_1000504144 219
60 3300006038 Ga0075365_10353880 Ga0075365_103538801 219
61 3300009177 Ga0105248_10190711 Ga0105248_101907113 219
62 3300013307 Ga0157372_10016027 Ga0157372_100160279 219
63 3300015262 Ga0182007_10048230 Ga0182007_100482301 219
64 3300020082 Ga0206353_11087691 Ga0206353_110876911 219
65 3300020082 Ga0206353_11344247 Ga0206353_113442471 219
66 3300025904 Ga0207647_10240526 Ga0207647_102405262 219
67 3300025917 Ga0207660_10504687 Ga0207660_105046871 219
68 3300025921 Ga0207652_10280583 Ga0207652_102805831 219
69 3300025944 Ga0207661_10231813 Ga0207661_102318133 219
70 3300026095 Ga0207676_10079526 Ga0207676_100795261 219
71 3300026116 Ga0207674_10292556 Ga0207674_102925561 219
72 3300028379 Ga0268266_10022723 Ga0268266_100227236 219
73 3300044684 Ga0466966_0122461 Ga0466966_0122461_822_1490 219
74 3300044693 Ga0466961_0153131 Ga0466961_0153131_304_996 219
75 3300044694 Ga0466963_0138801 Ga0466963_0138801_311_973 219
76 3300044694 Ga0466963_0151273 Ga0466963_0151273_334_1104 219
77 3300044694 Ga0466963_0343950 Ga0466963_0343950_378_1040 219
78 3300044706 Ga0466964_0131295 Ga0466964_0131295_54_716 219
79 3300044842 Ga0466957_0157022 Ga0466957_0157022_163_867 219
80 3300045049 Ga0466959_0103150 Ga0466959_0103150_753_1427 219
81 3300045049 Ga0466959_0123349 Ga0466959_0123349_484_1176 219
82 3300045049 Ga0466959_0295812 Ga0466959_0295812_293_961 219
83 3300045836 Ga0466958_0025154 Ga0466958_0025154_2257_2925 219
84 3300045976 Ga0466967_0118327 Ga0466967_0118327_526_1185 219
85 3300045976 Ga0466967_0385262 Ga0466967_0385262_462_1169 219
86 3300046474 Ga0495605_0196625 Ga0495605_0196625_26_688 219
87 3300046519 Ga0495632_0017339 Ga0495632_0017339_1179_1841 219
88 3300046529 Ga0495652_0389916 Ga0495652_0389916_208_867 219
89 3300046533 Ga0495640_0129468 Ga0495640_0129468_236_895 219
90 3300046660 Ga0495625_0106794 Ga0495625_0106794_543_1211 219
91 3300046660 Ga0495625_0495257 Ga0495625_0495257_51_713 219
92 3300046663 Ga0495635_0349049 Ga0495635_0349049_297_956 219
93 3300046694 Ga0495649_0002665 Ga0495649_0002665_2507_3169 219
94 3300046809 Ga0495600_0036026 Ga0495600_0036026_809_1489 219
95 3300046809 Ga0495600_0083575 Ga0495600_0083575_1129_1791 219
96 3300047315 Ga0495581_0292572 Ga0495581_0292572_249_908 219
97 3300047320 Ga0495672_0035018 Ga0495672_0035018_2027_2701 219
98 3300047443 Ga0495687_001198 Ga0495687_001198_15368_16030 219
99 3300047443 Ga0495687_011191 Ga0495687_011191_2534_3196 219
100 3300047444 Ga0495675_0094653 Ga0495675_0094653_734_1393 219
101 3300048903 Ga0496100_0066377 Ga0496100_0066377_980_1642 219
102 3300048903 Ga0496100_0081392 Ga0496100_0081392_1437_2099 219
103 3300048904 Ga0496101_0029252 Ga0496101_0029252_1461_2123 219
104 3300048904 Ga0496101_0054173 Ga0496101_0054173_483_1145 219
105 3300048904 Ga0496101_0489780 Ga0496101_0489780_154_813 219
106 3300048905 Ga0496102_0003154 Ga0496102_0003154_1066_1728 219
107 3300048906 Ga0496103_0226802 Ga0496103_0226802_258_920 219
108 3300048907 Ga0496104_0001045 Ga0496104_0001045_13333_13995 219
109 3300048907 Ga0496104_0521620 Ga0496104_0521620_58_720 219
110 3300048908 Ga0496105_0008182 Ga0496105_0008182_4394_5056 219
111 3300048909 Ga0496106_0452396 Ga0496106_0452396_353_1015 219
112 3300048910 Ga0496107_0401004 Ga0496107_0401004_271_930 219
113 3300048914 Ga0496111_0009411 Ga0496111_0009411_3696_4358 219
114 3300048915 Ga0496112_0384318 Ga0496112_0384318_405_1067 219
115 3300048915 Ga0496112_0672111 Ga0496112_0672111_143_811 219
116 3300048917 Ga0496114_0014844 Ga0496114_0014844_1510_2172 219
117 3300048917 Ga0496114_0611300 Ga0496114_0611300_50_712 219
118 3300048927 Ga0496124_0149113 Ga0496124_0149113_1038_1703 219
119 3300053078 Ga0495612_0004879 Ga0495612_0004879_2526_3206 219
120 3300061719 Ga0466962_0108874 Ga0466962_0108874_92_796 219
121 3300001990 JGI24737J22298_10062677 JGI24737J22298_100626771 220
122 3300005616 Ga0068852_100005287 Ga0068852_1000052878 220
123 3300026142 Ga0207698_10013544 Ga0207698_100135442 220
124 3300048905 Ga0496102_0659305 Ga0496102_0659305_172_843 220
125 3300048913 Ga0496110_0038472 Ga0496110_0038472_884_1561 220
126 3300048914 Ga0496111_0061737 Ga0496111_0061737_71_748 220
127 3300048927 Ga0496124_0224735 Ga0496124_0224735_387_1088 220

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03575

Peptidase_S51

Peptidase family S51

40

247

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3l4e-assembly1.cif.gz_A 1.5a crystal structure of a putative peptidase e protein from listeria monocytogenes egd-e 0.6908 1 212
3l4e-assembly1.cif.gz_A 1.5a crystal structure of a putative peptidase e protein from listeria monocytogenes egd-e 0.6848 1 212
6iru-assembly2.cif.gz_B crystal structure of peptidase e from deinococcus radiodurans in p6422 space group 0.6209 2 210
6iru-assembly2.cif.gz_B crystal structure of peptidase e from deinococcus radiodurans in p6422 space group 0.6078 2 210
7c9b-assembly1.cif.gz_A-2 crystal structure of dipeptidase-e from xenopus laevis 0.605 2 218
ID Description Score Start End Superfamily
3l4eA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.7014 1 212 3.40.50.880
3l4eA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.6984 1 212 3.40.50.880
af_Q4DDW3_172_579_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.6373 190 212 2.120.10.30
af_F1QCQ2_15_246_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.5699 197 217 2.60.40.10
af_Q20005_308_366_2.30.30.40 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.566 193 217 2.30.30.40
ID Description Score Start End GO Terms
AF-A0A0Q6N0L7-F1-model_v4 Peptidase S51 dipeptidase E 0.975 157 217 GO:0006508
GO:0008236
AF-A0A1F6DRL2-F1-model_v4 Uncharacterized protein 0.9473 160 218
AF-A0A0A6UMA9-F1-model_v4 deleted 0.9176 159 218
AF-A0A0G0P5W3-F1-model_v4 Peptidase S51 dipeptidase E 0.9052 158 217 GO:0006508
GO:0008236
AF-A0A350PZT6-F1-model_v4 Uncharacterized protein 0.9012 164 218

Feature Viewer

pLDDT pTM Quality
79.63 0.82 High
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Predicted Structure (AlphaFold2)

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