F133131

General Info

Members Datasets Scaffolds Average Seq Length
127 84 254 256

Family's Representative Sequence

Representative Sequence 3300005340|Ga0070689_100119405|Ga0070689_1001194052
Length 241
Sequence MGHAELKAIVSYCDRLLRTSEIGDYDGAVNGLQVENNGRVSRIAAAVDASLATVVHHGLFWGPAYPWTGKRYALMDVLLKNNLAVYSSHLPLDAHPKLGNNAQLCARLGLKSLRPFFSSHGQPIGFQARAKILRSQLLARLERATGSKALLIPGGGEVCQRIGVVTGGAGSELKQAVAEGVDTFITGEGPHWTYALAEELEMNVLYGGHYATETFGVKALASALSRKFGVPFEFLDHPTGL

Samples

Sample ID Description Type Environment
1 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
18 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
36 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
37 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
38 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
39 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
40 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
41 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
42 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
45 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
46 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
47 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
48 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
49 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
54 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
55 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
56 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
57 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
58 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
59 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
60 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
61 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
62 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
63 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
64 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
65 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
66 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
67 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
68 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
69 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
70 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
71 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
76 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
77 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
78 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
79 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.79
Nodule 0
Rhizoplane 0
Rhizosphere 98.43
Stem 0
Stem Tuber 0
Unclassified 15.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070689_100119405 3300005340 Bacteria 2105
2 rootH1_10174062 3300003323 Bacteria 8746
3 Ga0070683_100500149 3300005329 Bacteria 1161
4 Ga0070690_100002089 3300005330 Bacteria 10674
5 Ga0070687_100083897 3300005343 Bacteria 1745
6 Ga0070675_100183107 3300005354 Bacteria 1812
7 Ga0070688_100026816 3300005365 Bacteria 3427
8 Ga0070688_100067235 3300005365 Unclassified 2283
9 Ga0070714_100009447 3300005435 Bacteria 7669
10 Ga0070711_100003218 3300005439 Bacteria 9479
11 Ga0070685_10098680 3300005466 Bacteria 1780
12 Ga0070704_100117014 3300005549 Bacteria 2039
13 Ga0068855_100093338 3300005563 Bacteria 3470
14 Ga0068857_100165896 3300005577 Bacteria 2006
15 Ga0068857_100206170 3300005577 Bacteria 1793
16 Ga0068856_100002177 3300005614 Bacteria 20316
17 Ga0068856_100043170 3300005614 Bacteria 4436
18 Ga0068856_100070238 3300005614 Bacteria 3464
19 Ga0068859_100018406 3300005617 Bacteria 7022
20 Ga0068859_100067197 3300005617 Bacteria 3619
21 Ga0075431_100383980 3300006847 Bacteria 1408
22 Ga0075434_100229843 3300006871 Bacteria 1874
23 Ga0097620_100018406 3300006931 Bacteria 7022
24 Ga0097620_100067197 3300006931 Bacteria 3619
25 Ga0105240_10007447 3300009093 Bacteria 15886
26 Ga0105240_10112377 3300009093 Bacteria 3293
27 Ga0105241_10231590 3300009174 Bacteria 1557
28 Ga0105242_10313359 3300009176 Bacteria 1436
29 Ga0105248_10156718 3300009177 Bacteria 2570
30 Ga0105238_10044529 3300009551 Bacteria 4486
31 Ga0105238_10511998 3300009551 Unclassified 1202
32 Ga0157372_10258982 3300013307 Bacteria 2020
33 Ga0207695_10117332 3300025913 Bacteria 2634
34 Ga0207663_10002110 3300025916 Bacteria 9479
35 Ga0207662_10114680 3300025918 Bacteria 1683
36 Ga0207694_10458987 3300025924 Bacteria 1064
37 Ga0207659_10072436 3300025926 Bacteria 2519
38 Ga0207664_10020248 3300025929 Bacteria 4928
39 Ga0207670_10070999 3300025936 Bacteria 2407
40 Ga0207667_10132513 3300025949 Bacteria 2567
41 Ga0207667_10321741 3300025949 Bacteria 1580
42 Ga0207702_10003283 3300026078 Bacteria 14918
43 Ga0207702_10017866 3300026078 Bacteria 5871
44 Ga0207674_10127615 3300026116 Bacteria 2508
45 Ga0265337_1000172 3300028556 Bacteria 33853
46 Ga0265337_1002291 3300028556 Bacteria 8896
47 Ga0265326_10023110 3300028558 Unclassified 1778
48 Ga0265326_10049895 3300028558 Unclassified 1186
49 Ga0265319_1103761 3300028563 Bacteria 891
50 Ga0265334_10002900 3300028573 Bacteria 7864
51 Ga0265318_10014429 3300028577 Bacteria 3316
52 Ga0265323_10000241 3300028653 Bacteria 32239
53 Ga0265322_10055239 3300028654 Unclassified 1126
54 Ga0265336_10049875 3300028666 Bacteria 1267
55 Ga0265338_10001238 3300028800 Bacteria 42063
56 Ga0265338_10002849 3300028800 Bacteria 25270
57 Ga0265338_10007041 3300028800 Bacteria 14107
58 Ga0265338_10009172 3300028800 Bacteria 11867
59 Ga0265338_10022230 3300028800 Bacteria 6574
60 Ga0265338_10029980 3300028800 Bacteria 5377
61 Ga0265338_10053463 3300028800 Bacteria 3612
62 Ga0265338_10058603 3300028800 Bacteria 3398
63 Ga0265338_10065573 3300028800 Bacteria 3148
64 Ga0265338_10080608 3300028800 Unclassified 2734
65 Ga0265338_10155247 3300028800 Bacteria 1774
66 Ga0265324_10008534 3300029957 Bacteria 4066
67 Ga0265324_10060612 3300029957 Unclassified 1293
68 Ga0265324_10117600 3300029957 Bacteria 903
69 Ga0265332_10039069 3300031238 Bacteria 2055
70 Ga0265320_10003450 3300031240 Bacteria 10630
71 Ga0265320_10010201 3300031240 Bacteria 5610
72 Ga0265340_10092500 3300031247 Bacteria 1412
73 Ga0265339_10096273 3300031249 Bacteria 1545
74 Ga0265327_10002168 3300031251 Bacteria 21606
75 Ga0265327_10015974 3300031251 Bacteria 4804
76 Ga0265327_10111385 3300031251 Bacteria 1307
77 Ga0265316_10011957 3300031344 Bacteria 7800
78 Ga0265316_10029885 3300031344 Unclassified 4474
79 Ga0265316_10292770 3300031344 Bacteria 1187
80 Ga0265313_10010711 3300031595 Bacteria 5769
81 Ga0265314_10062316 3300031711 Bacteria 2535
82 Ga0265342_10081012 3300031712 Bacteria 1875
83 Ga0373930_0001029 3300034816 Unclassified 4016
84 Ga0373950_0013638 3300034818 Bacteria 1358
85 Ga0373928_0000947 3300035084 Bacteria 5703
86 Ga0373929_0004847 3300035085 Unclassified 2411
87 Ga0373940_0032949 3300035088 Bacteria 1391
88 Ga0373944_0000344 3300035089 Bacteria 10453
89 Ga0373949_0001923 3300035090 Bacteria 5600
90 Ga0373951_0005337 3300035091 Unclassified 2991
91 Ga0373932_0000022 3300035112 Bacteria 48924
92 Ga0373945_0012962 3300035116 Unclassified 2777
93 Ga0373954_0004804 3300035118 Bacteria 5826
94 Ga0373946_0137286 3300035171 Bacteria 1130
95 Ga0373962_0000065 3300035242 Bacteria 23313
96 Ga0373931_0000074 3300035691 Bacteria 46721
97 Ga0373935_0010479 3300035692 Bacteria 5562
98 Ga0373935_0196518 3300035692 Bacteria 1392
99 Ga0373927_0045893 3300035695 Bacteria 2827
100 Ga0373927_0061203 3300035695 Unclassified 2436
101 Ga0373927_0148028 3300035695 Unclassified 1537
102 Ga0373927_0326949 3300035695 Unclassified 1010
103 Ga0373947_0019147 3300035725 Unclassified 3946
104 Ga0373947_0053074 3300035725 Unclassified 2444
105 Ga0373925_0002917 3300037068 Bacteria 13487
106 Ga0373925_0011789 3300037068 Bacteria 6327
107 Ga0451577_0413099 3300042876 Unclassified 1225
108 Ga0453684_0008084 3300044712 Bacteria 19017
109 Ga0453684_0041311 3300044712 Bacteria 6242
110 Ga0453684_0902678 3300044712 Bacteria 946
111 Ga0451576_0043837 3300045051 Bacteria 4719
112 Ga0495630_0189031 3300046517 Bacteria 1571
113 Ga0495640_0051441 3300046533 Unclassified 2832
114 Ga0495586_0018647 3300046535 Bacteria 3694
115 Ga0495622_0015218 3300046557 Bacteria 3576
116 Ga0501031_0001465 3300049568 Bacteria 14644
117 Ga0501031_0027862 3300049568 Bacteria 3683
118 Ga0501032_0023016 3300049569 Bacteria 4313
119 Ga0501032_0085821 3300049569 Bacteria 2092
120 Ga0501033_0002222 3300049570 Bacteria 16689
121 Ga0501033_0028662 3300049570 Bacteria 4183
122 Ga0501035_0005784 3300049822 Bacteria 11653
123 Ga0501035_0108851 3300049822 Bacteria 2429
124 Ga0501035_0132451 3300049822 Bacteria 2172
125 Ga0501044_0000014 3300049823 Bacteria 244619
126 Ga0501044_0014309 3300049823 Bacteria 8564
127 Ga0500651_0313068 3300053093 Unclassified 898
128 Ga0070689_100119405
129 rootH1_10174062
130 Ga0070683_100500149
131 Ga0070690_100002089
132 Ga0070687_100083897
133 Ga0070675_100183107
134 Ga0070688_100026816
135 Ga0070688_100067235
136 Ga0070714_100009447
137 Ga0070711_100003218
138 Ga0070685_10098680
139 Ga0070704_100117014
140 Ga0068855_100093338
141 Ga0068857_100165896
142 Ga0068857_100206170
143 Ga0068856_100002177
144 Ga0068856_100043170
145 Ga0068856_100070238
146 Ga0068859_100018406
147 Ga0068859_100067197
148 Ga0075431_100383980
149 Ga0075434_100229843
150 Ga0097620_100018406
151 Ga0097620_100067197
152 Ga0105240_10007447
153 Ga0105240_10112377
154 Ga0105241_10231590
155 Ga0105242_10313359
156 Ga0105248_10156718
157 Ga0105238_10044529
158 Ga0105238_10511998
159 Ga0157372_10258982
160 Ga0207695_10117332
161 Ga0207663_10002110
162 Ga0207662_10114680
163 Ga0207694_10458987
164 Ga0207659_10072436
165 Ga0207664_10020248
166 Ga0207670_10070999
167 Ga0207667_10132513
168 Ga0207667_10321741
169 Ga0207702_10003283
170 Ga0207702_10017866
171 Ga0207674_10127615
172 Ga0265337_1000172
173 Ga0265337_1002291
174 Ga0265326_10023110
175 Ga0265326_10049895
176 Ga0265319_1103761
177 Ga0265334_10002900
178 Ga0265318_10014429
179 Ga0265323_10000241
180 Ga0265322_10055239
181 Ga0265336_10049875
182 Ga0265338_10001238
183 Ga0265338_10002849
184 Ga0265338_10007041
185 Ga0265338_10009172
186 Ga0265338_10022230
187 Ga0265338_10029980
188 Ga0265338_10053463
189 Ga0265338_10058603
190 Ga0265338_10065573
191 Ga0265338_10080608
192 Ga0265338_10155247
193 Ga0265324_10008534
194 Ga0265324_10060612
195 Ga0265324_10117600
196 Ga0265332_10039069
197 Ga0265320_10003450
198 Ga0265320_10010201
199 Ga0265340_10092500
200 Ga0265339_10096273
201 Ga0265327_10002168
202 Ga0265327_10015974
203 Ga0265327_10111385
204 Ga0265316_10011957
205 Ga0265316_10029885
206 Ga0265316_10292770
207 Ga0265313_10010711
208 Ga0265314_10062316
209 Ga0265342_10081012
210 Ga0373930_0001029
211 Ga0373950_0013638
212 Ga0373928_0000947
213 Ga0373929_0004847
214 Ga0373940_0032949
215 Ga0373944_0000344
216 Ga0373949_0001923
217 Ga0373951_0005337
218 Ga0373932_0000022
219 Ga0373945_0012962
220 Ga0373954_0004804
221 Ga0373946_0137286
222 Ga0373962_0000065
223 Ga0373931_0000074
224 Ga0373935_0010479
225 Ga0373935_0196518
226 Ga0373927_0045893
227 Ga0373927_0061203
228 Ga0373927_0148028
229 Ga0373927_0326949
230 Ga0373947_0019147
231 Ga0373947_0053074
232 Ga0373925_0002917
233 Ga0373925_0011789
234 Ga0451577_0413099
235 Ga0453684_0008084
236 Ga0453684_0041311
237 Ga0453684_0902678
238 Ga0451576_0043837
239 Ga0495630_0189031
240 Ga0495640_0051441
241 Ga0495586_0018647
242 Ga0495622_0015218
243 Ga0501031_0001465
244 Ga0501031_0027862
245 Ga0501032_0023016
246 Ga0501032_0085821
247 Ga0501033_0002222
248 Ga0501033_0028662
249 Ga0501035_0005784
250 Ga0501035_0108851
251 Ga0501035_0132451
252 Ga0501044_0000014
253 Ga0501044_0014309
254 Ga0500651_0313068

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01784

DUF34_NIF3

Duf34/NIF3 (NGG1p interacting factor 3)

8

230

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yyb-assembly1.cif.gz_A crystal structure of ttha1606 from thermus thermophilus hb8 0.9413 4 253
2yyb-assembly1.cif.gz_A crystal structure of ttha1606 from thermus thermophilus hb8 0.9376 4 253
1nmo-assembly1.cif.gz_A structural genomics, protein ybgi, unknown function 0.9303 4 253
1nmo-assembly1.cif.gz_A structural genomics, protein ybgi, unknown function 0.9267 4 253
3wse-assembly1.cif.gz_A reduced hcgd from methanocaldococcus jannaschii 0.8926 3 249
ID Description Score Start End Superfamily
af_P0AFP6_127_241_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9383 137 247 3.40.50.12780
2yybB01 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;NIF3 (NGG1p interacting factor 3)-like 0.9296 4 100 3.40.1390.30
af_P0AFP6_3_97_3.40.1390.30 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;NIF3 (NGG1p interacting factor 3)-like 0.924 7 101 3.40.1390.30
1nmoA01 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;NIF3 (NGG1p interacting factor 3)-like 0.9205 7 99 3.40.1390.30
1nmoB02 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;NIF3 (NGG1p interacting factor 3)-like 0.9137 101 223 3.40.1390.30
ID Description Score Start End GO Terms
AF-A0A357TEF5-F1-model_v4 Nif3-like dinuclear metal center hexameric protein 0.9966 149 243 GO:0005737
AF-A0A836UNB4-F1-model_v4 Nif3-like dinuclear metal center hexameric protein 0.9877 10 101
AF-A0A2N9NQV5-F1-model_v4 Putative GTP cyclohydrolase 1 type 2 (EC 3.5.4.16) 0.9874 1 253 GO:0003934
GO:0005737
AF-A0A2D5WIS0-F1-model_v4 Nif3-like dinuclear metal center hexameric protein 0.9867 1 184 GO:0005737
AF-A0A3C1VHE1-F1-model_v4 Nif3-like dinuclear metal center hexameric protein 0.9863 42 253 GO:0005737

Map