F130359

General Info

Members Datasets Scaffolds Average Seq Length
126 97 125 314

Family's Representative Sequence

Representative Sequence 3300009553|Ga0105249_10183824|Ga0105249_101838241
Length 372
Sequence MRALQRDCPSLSSQQSTVAPGKPIPPNVTSWMAKRTCLVVTGPRYHLNRETFDRPTPDTIERVLQAPRPFRFLAGFQAIVDPAALAQTARRAESIGFSALVIPDHLIEQLSPVPALAIVAAATKTLRIGTFVVNNDLRHPAVLAQDMASLDVLSGGRLEIGIGAGWNRPEYDAIGLTFEPVATRVERLAESVTVLKGLFGEGPFTFQGRHYAITDHDGQPKPVQKPHPPLRTLSLAAREADVVGLAPRQLSGQRVEPRSLTWAATEEKIDWVRDAAGERFAGLELNVYPSSWEIVVTNDAHAEAHRVIDHLRARSGIELTVDEVLGSPHLFIGTVDALVDKIRDLRARLGISSFMLGEVDELAPIVERLAGT

Samples

Sample ID Description Type Environment
1 2643221679 Angustibacter sp. Root456 Isolate Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
56 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
57 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
62 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
68 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
69 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
73 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
74 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
77 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
85 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
86 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
87 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
88 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
89 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
90 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
91 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
92 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
96 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
97 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.41
Metatranscriptomes 0.79
Isolates 0.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.79
Nodule 0
Rhizoplane 17.46
Rhizosphere 80.16
Stem 0
Stem Tuber 0
Unclassified 1.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10006502 3300003322 Bacteria 2575
2 Ga0070683_100169584 3300005329 Bacteria 2072
3 Ga0070683_100303267 3300005329 Bacteria 1520
4 Ga0070680_100000008 3300005336 Bacteria 100309
5 Ga0068868_100268082 3300005338 Unclassified 1442
6 Ga0070673_100538293 3300005364 Unclassified 1060
7 Ga0070709_10015223 3300005434 Bacteria 4371
8 Ga0070714_100053826 3300005435 Bacteria 3437
9 Ga0070713_100104697 3300005436 Unclassified 2457
10 Ga0070705_100291710 3300005440 Bacteria 1165
11 Ga0070700_100000012 3300005441 Bacteria 171410
12 Ga0070708_100134430 3300005445 Unclassified 2290
13 Ga0070708_100599851 3300005445 Bacteria 1038
14 Ga0070678_100096397 3300005456 Bacteria 2282
15 Ga0070707_100181702 3300005468 Unclassified 2050
16 Ga0070707_100186460 3300005468 Bacteria 2023
17 Ga0070679_100112498 3300005530 Unclassified 2708
18 Ga0070684_100194469 3300005535 Bacteria 1846
19 Ga0070697_100139300 3300005536 Bacteria 2039
20 Ga0070696_100025891 3300005546 Bacteria 3990
21 Ga0068855_100029039 3300005563 Bacteria 6614
22 Ga0068859_100189507 3300005617 Unclassified 2141
23 Ga0068859_100326156 3300005617 Unclassified 1629
24 Ga0068864_100306197 3300005618 Bacteria 1489
25 Ga0081455_10105566 3300005937 Bacteria 2251
26 Ga0081539_10000675 3300005985 Bacteria 68421
27 Ga0081539_10004950 3300005985 Bacteria 14151
28 Ga0070716_100025854 3300006173 Bacteria 3138
29 Ga0097621_100085169 3300006237 Bacteria 2636
30 Ga0075428_100000305 3300006844 Bacteria 48274
31 Ga0075431_100079305 3300006847 Bacteria 3389
32 Ga0097620_100326126 3300006931 Unclassified 1629
33 Ga0111539_10347448 3300009094 Bacteria 1726
34 Ga0105245_10008341 3300009098 Bacteria 9053
35 Ga0105245_10101587 3300009098 Bacteria 2662
36 Ga0105245_10185400 3300009098 Bacteria 1990
37 Ga0105242_10266381 3300009176 Bacteria 1550
38 Ga0105248_10408356 3300009177 Bacteria 1529
39 Ga0105249_10183824 3300009553 Bacteria 2036
40 Ga0105239_10084054 3300010375 Bacteria 3505
41 Ga0105239_10341359 3300010375 Bacteria 1690
42 Ga0105239_10660517 3300010375 Bacteria 1194
43 Ga0105246_10421526 3300011119 Bacteria 1114
44 Ga0157374_10353647 3300013296 Bacteria 1460
45 Ga0157375_10021724 3300013308 Bacteria 5892
46 Ga0163163_10047355 3300014325 Bacteria 4226
47 Ga0163163_10059142 3300014325 Bacteria 3790
48 Ga0157380_10167685 3300014326 Bacteria 1915
49 Ga0206353_11469466 3300020082 Bacteria 2519
50 Ga0207699_10035410 3300025906 Bacteria 2840
51 Ga0207707_10047180 3300025912 Bacteria 3752
52 Ga0207660_10000001 3300025917 Bacteria 1034169
53 Ga0207652_10007370 3300025921 Bacteria 8868
54 Ga0207646_10012892 3300025922 Bacteria 8013
55 Ga0207687_10102742 3300025927 Bacteria 2106
56 Ga0207700_10081152 3300025928 Unclassified 2532
57 Ga0207664_10021874 3300025929 Bacteria 4765
58 Ga0207665_10038641 3300025939 Bacteria 3179
59 Ga0207667_10093906 3300025949 Bacteria 3098
60 Ga0207651_10058640 3300025960 Bacteria 2662
61 Ga0207708_10000081 3300026075 Bacteria 74669
62 Ga0207708_10195155 3300026075 Bacteria 1613
63 Ga0207676_10263392 3300026095 Bacteria 1558
64 Ga0207428_10139708 3300027907 Bacteria 1850
65 Ga0265319_1000607 3300028563 Bacteria 23698
66 Ga0265329_10015739 3300031242 Bacteria 2636
67 Ga0265340_10000412 3300031247 Bacteria 22961
68 Ga0307405_10035106 3300031731 Unclassified 2992
69 Ga0307413_10131804 3300031824 Bacteria 1712
70 Ga0307416_100060662 3300032002 Unclassified 3082
71 Ga0307411_10058874 3300032005 Bacteria 2545
72 Ga0373943_0104533 3300035170 Bacteria 1486
73 Ga0373935_0371642 3300035692 Bacteria 1023
74 Ga0395901_0043274 3300038443 Bacteria 4672
75 Ga0395901_0262935 3300038443 Bacteria 1796
76 Ga0466963_0117264 3300044694 Bacteria 1830
77 Ga0466967_0043707 3300045976 Bacteria 3881
78 Ga0466967_0050396 3300045976 Bacteria 3645
79 Ga0466967_0164957 3300045976 Bacteria 2081
80 Ga0495635_0246102 3300046663 Bacteria 1206
81 Ga0496102_0241802 3300048905 Bacteria 1702
82 Ga0496104_0107522 3300048907 Bacteria 2673
83 Ga0496105_0045031 3300048908 Bacteria 3641
84 Ga0496105_0065138 3300048908 Bacteria 3008
85 Ga0496105_0169241 3300048908 Unclassified 1792
86 Ga0496105_0210096 3300048908 Bacteria 1587
87 Ga0496108_0045611 3300048911 Bacteria 3661
88 Ga0496108_0140395 3300048911 Bacteria 2081
89 Ga0496108_0255958 3300048911 Unclassified 1523
90 Ga0496108_0611051 3300048911 Bacteria 950
91 Ga0496109_0083531 3300048912 Bacteria 2945
92 Ga0496110_0132935 3300048913 Bacteria 2247
93 Ga0496111_0120881 3300048914 Bacteria 1934
94 Ga0496112_0000010 3300048915 Bacteria 245046
95 Ga0496112_0012039 3300048915 Bacteria 7936
96 Ga0496112_0119847 3300048915 Unclassified 2601
97 Ga0496112_0384891 3300048915 Bacteria 1343
98 Ga0496113_0072493 3300048916 Bacteria 2621
99 Ga0496113_0216503 3300048916 Bacteria 1526
100 Ga0496113_0261000 3300048916 Bacteria 1384
101 Ga0496113_0270573 3300048916 Bacteria 1358
102 Ga0496114_0018775 3300048917 Bacteria 5596
103 Ga0501031_0051944 3300049568 Bacteria 2671
104 Ga0501034_0103494 3300049571 Bacteria 2841
105 Ga0501038_0083073 3300049574 Bacteria 2697
106 Ga0501039_0103024 3300049575 Bacteria 2228
107 Ga0501040_0029013 3300049576 Bacteria 3733
108 Ga0501048_0101321 3300049582 Bacteria 2032
109 Ga0501068_0165155 3300049584 Bacteria 1396
110 Ga0501072_0058068 3300049588 Bacteria 3050
111 Ga0501075_0072114 3300049591 Bacteria 2611
112 Ga0501076_0094187 3300049592 Bacteria 2411
113 Ga0501076_0206255 3300049592 Bacteria 1606
114 Ga0501077_0124412 3300049593 Bacteria 1635
115 Ga0501080_0140065 3300049742 Bacteria 2237
116 Ga0501045_0020136 3300049824 Bacteria 4763
117 nmdc:mga0yw44_218452_c1 3300050492 Bacteria 1262
118 nmdc:mga09592_46257_c1 3300050508 Bacteria 3666
119 nmdc:mga06r32_178435_c1 3300050510 Bacteria 2109
120 nmdc:mga06r32_354200_c1 3300050510 Bacteria 1452
121 nmdc:mga08y16_205909_c1 3300050511 Bacteria 2038
122 nmdc:mga08y16_334848_c1 3300050511 Bacteria 1556
123 nmdc:mga0a205_532640_c1 3300050515 Bacteria 1030
124 Ga0495655_0031502 3300053083 Bacteria 1291
125 Ga0501082_0184643 3300060353 Bacteria 1814

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035692 Ga0373935_0371642 Ga0373935_0371642_222_1007 261
2 3300048916 Ga0496113_0261000 Ga0496113_0261000_14_862 282
3 3300045976 Ga0466967_0050396 Ga0466967_0050396_2066_3007 287
4 3300048911 Ga0496108_0611051 Ga0496108_0611051_10_885 291
5 3300049571 Ga0501034_0103494 Ga0501034_0103494_1674_2582 297
6 3300049742 Ga0501080_0140065 Ga0501080_0140065_922_1830 297
7 3300010375 Ga0105239_10341359 Ga0105239_103413592 298
8 3300005441 Ga0070700_100000012 Ga0070700_100000012104 299
9 3300026075 Ga0207708_10000081 Ga0207708_1000008113 299
10 3300050511 nmdc:mga08y16_334848_c1 nmdc:mga08y16_334848_c1_305_1231 301
11 3300005563 Ga0068855_100029039 Ga0068855_1000290397 303
12 3300005617 Ga0068859_100326156 Ga0068859_1003261562 303
13 3300005618 Ga0068864_100306197 Ga0068864_1003061972 303
14 3300006931 Ga0097620_100326126 Ga0097620_1003261262 303
15 3300009553 Ga0105249_10183824 Ga0105249_101838241 303
16 3300010375 Ga0105239_10084054 Ga0105239_100840543 303
17 3300010375 Ga0105239_10660517 Ga0105239_106605172 303
18 3300013308 Ga0157375_10021724 Ga0157375_100217242 303
19 3300025949 Ga0207667_10093906 Ga0207667_100939062 303
20 3300025960 Ga0207651_10058640 Ga0207651_100586402 303
21 3300026095 Ga0207676_10263392 Ga0207676_102633923 303
22 3300048915 Ga0496112_0012039 Ga0496112_0012039_4855_5883 303
23 3300005329 Ga0070683_100303267 Ga0070683_1003032672 304
24 3300005530 Ga0070679_100112498 Ga0070679_1001124983 304
25 3300025912 Ga0207707_10047180 Ga0207707_100471802 304
26 3300025921 Ga0207652_10007370 Ga0207652_100073708 304
27 3300050510 nmdc:mga06r32_354200_c1 nmdc:mga06r32_354200_c1_87_1034 305
28 3300049591 Ga0501075_0072114 Ga0501075_0072114_1589_2521 306
29 3300049592 Ga0501076_0206255 Ga0501076_0206255_65_1009 306
30 iso_pu_bacteria 2643221679 2644444616 307
31 3300032002 Ga0307416_100060662 Ga0307416_1000606626 309
32 3300050511 nmdc:mga08y16_205909_c1 nmdc:mga08y16_205909_c1_180_1109 309
33 3300005434 Ga0070709_10015223 Ga0070709_100152233 310
34 3300005435 Ga0070714_100053826 Ga0070714_1000538262 310
35 3300005436 Ga0070713_100104697 Ga0070713_1001046974 310
36 3300005445 Ga0070708_100599851 Ga0070708_1005998511 310
37 3300005536 Ga0070697_100139300 Ga0070697_1001393003 310
38 3300005937 Ga0081455_10105566 Ga0081455_101055662 310
39 3300005985 Ga0081539_10004950 Ga0081539_100049509 310
40 3300006173 Ga0070716_100025854 Ga0070716_1000258543 310
41 3300006844 Ga0075428_100000305 Ga0075428_10000030515 310
42 3300006847 Ga0075431_100079305 Ga0075431_1000793052 310
43 3300009098 Ga0105245_10008341 Ga0105245_100083414 310
44 3300009177 Ga0105248_10408356 Ga0105248_104083561 310
45 3300013296 Ga0157374_10353647 Ga0157374_103536472 310
46 3300014325 Ga0163163_10047355 Ga0163163_100473552 310
47 3300014325 Ga0163163_10059142 Ga0163163_100591422 310
48 3300014326 Ga0157380_10167685 Ga0157380_101676852 310
49 3300020082 Ga0206353_11469466 Ga0206353_114694663 310
50 3300025906 Ga0207699_10035410 Ga0207699_100354103 310
51 3300025928 Ga0207700_10081152 Ga0207700_100811522 310
52 3300025929 Ga0207664_10021874 Ga0207664_100218743 310
53 3300025939 Ga0207665_10038641 Ga0207665_100386413 310
54 3300026075 Ga0207708_10195155 Ga0207708_101951552 310
55 3300027907 Ga0207428_10139708 Ga0207428_101397082 310
56 3300028563 Ga0265319_1000607 Ga0265319_100060723 310
57 3300031242 Ga0265329_10015739 Ga0265329_100157394 310
58 3300031247 Ga0265340_10000412 Ga0265340_1000041211 310
59 3300031731 Ga0307405_10035106 Ga0307405_100351063 310
60 3300031824 Ga0307413_10131804 Ga0307413_101318041 310
61 3300032005 Ga0307411_10058874 Ga0307411_100588741 310
62 3300038443 Ga0395901_0043274 Ga0395901_0043274_2152_3108 310
63 3300038443 Ga0395901_0262935 Ga0395901_0262935_585_1553 310
64 3300044694 Ga0466963_0117264 Ga0466963_0117264_641_1582 310
65 3300045976 Ga0466967_0043707 Ga0466967_0043707_76_1017 310
66 3300045976 Ga0466967_0164957 Ga0466967_0164957_1023_1964 310
67 3300048905 Ga0496102_0241802 Ga0496102_0241802_256_1200 310
68 3300048908 Ga0496105_0045031 Ga0496105_0045031_373_1317 310
69 3300048908 Ga0496105_0210096 Ga0496105_0210096_586_1530 310
70 3300048911 Ga0496108_0140395 Ga0496108_0140395_81_1025 310
71 3300048913 Ga0496110_0132935 Ga0496110_0132935_1111_2055 310
72 3300048914 Ga0496111_0120881 Ga0496111_0120881_228_1172 310
73 3300048915 Ga0496112_0384891 Ga0496112_0384891_272_1216 310
74 3300048917 Ga0496114_0018775 Ga0496114_0018775_102_1046 310
75 3300049568 Ga0501031_0051944 Ga0501031_0051944_1068_2012 310
76 3300049574 Ga0501038_0083073 Ga0501038_0083073_516_1460 310
77 3300049575 Ga0501039_0103024 Ga0501039_0103024_700_1644 310
78 3300049576 Ga0501040_0029013 Ga0501040_0029013_1698_2642 310
79 3300049582 Ga0501048_0101321 Ga0501048_0101321_548_1492 310
80 3300049584 Ga0501068_0165155 Ga0501068_0165155_150_1100 310
81 3300049588 Ga0501072_0058068 Ga0501072_0058068_1716_2660 310
82 3300049592 Ga0501076_0094187 Ga0501076_0094187_1444_2388 310
83 3300049593 Ga0501077_0124412 Ga0501077_0124412_560_1504 310
84 3300049824 Ga0501045_0020136 Ga0501045_0020136_1146_2090 310
85 3300050492 nmdc:mga0yw44_218452_c1 nmdc:mga0yw44_218452_c1_143_1087 310
86 3300050508 nmdc:mga09592_46257_c1 nmdc:mga09592_46257_c1_1078_2028 310
87 3300050510 nmdc:mga06r32_178435_c1 nmdc:mga06r32_178435_c1_338_1288 310
88 3300053083 Ga0495655_0031502 Ga0495655_0031502_101_1045 310
89 3300060353 Ga0501082_0184643 Ga0501082_0184643_598_1542 310
90 3300003322 rootL2_10006502 rootL2_100065023 315
91 3300005329 Ga0070683_100169584 Ga0070683_1001695844 315
92 3300005336 Ga0070680_100000008 Ga0070680_10000000826 315
93 3300005338 Ga0068868_100268082 Ga0068868_1002680821 315
94 3300005364 Ga0070673_100538293 Ga0070673_1005382931 315
95 3300005440 Ga0070705_100291710 Ga0070705_1002917102 315
96 3300005445 Ga0070708_100134430 Ga0070708_1001344302 315
97 3300005456 Ga0070678_100096397 Ga0070678_1000963973 315
98 3300005468 Ga0070707_100181702 Ga0070707_1001817022 315
99 3300005468 Ga0070707_100186460 Ga0070707_1001864601 315
100 3300005535 Ga0070684_100194469 Ga0070684_1001944692 315
101 3300005546 Ga0070696_100025891 Ga0070696_1000258913 315
102 3300005617 Ga0068859_100189507 Ga0068859_1001895073 315
103 3300005985 Ga0081539_10000675 Ga0081539_1000067511 315
104 3300006237 Ga0097621_100085169 Ga0097621_1000851693 315
105 3300009094 Ga0111539_10347448 Ga0111539_103474482 315
106 3300009098 Ga0105245_10101587 Ga0105245_101015873 315
107 3300009098 Ga0105245_10185400 Ga0105245_101854002 315
108 3300009176 Ga0105242_10266381 Ga0105242_102663812 315
109 3300011119 Ga0105246_10421526 Ga0105246_104215262 315
110 3300025917 Ga0207660_10000001 Ga0207660_10000001190 315
111 3300025922 Ga0207646_10012892 Ga0207646_100128928 315
112 3300025927 Ga0207687_10102742 Ga0207687_101027421 315
113 3300035170 Ga0373943_0104533 Ga0373943_0104533_442_1389 315
114 3300046663 Ga0495635_0246102 Ga0495635_0246102_137_1084 315
115 3300048907 Ga0496104_0107522 Ga0496104_0107522_1521_2483 315
116 3300048908 Ga0496105_0065138 Ga0496105_0065138_887_1834 315
117 3300048908 Ga0496105_0169241 Ga0496105_0169241_81_1028 315
118 3300048911 Ga0496108_0045611 Ga0496108_0045611_267_1214 315
119 3300048911 Ga0496108_0255958 Ga0496108_0255958_460_1407 315
120 3300048912 Ga0496109_0083531 Ga0496109_0083531_643_1590 315
121 3300048915 Ga0496112_0000010 Ga0496112_0000010_68045_68998 315
122 3300048915 Ga0496112_0119847 Ga0496112_0119847_1002_1949 315
123 3300048916 Ga0496113_0072493 Ga0496113_0072493_1000_1947 315
124 3300048916 Ga0496113_0216503 Ga0496113_0216503_403_1350 315
125 3300048916 Ga0496113_0270573 Ga0496113_0270573_333_1280 315
126 3300050515 nmdc:mga0a205_532640_c1 nmdc:mga0a205_532640_c1_26_994 315

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

68

326

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5l0z-assembly1.cif.gz_B crystal structure of adomet bound rrna methyltransferase from sinorhizobium meliloti 0.8213 2 37
1nqk-assembly1.cif.gz_A structural genomics, crystal structure of alkanesulfonate monooxygenase 0.8027 3 310
7jv3-assembly1.cif.gz_A crystal structure of alkanesulfonate monooxygenase msud from pseudomonas fluorescens 0.7912 4 303
1nqk-assembly1.cif.gz_A structural genomics, crystal structure of alkanesulfonate monooxygenase 0.7839 3 310
7k64-assembly2.cif.gz_G binary titrated soak structure of alkanesulfonate monooxygenase msud from pseudomonas fluorescens with fmn 0.7833 4 296
ID Description Score Start End Superfamily
af_I6YEN3_22_323_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8828 15 312 3.20.20.30
af_I6YEN3_22_323_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.869 15 312 3.20.20.30
5l0zB02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8213 2 37 3.40.1280.10
af_P95159_1_299_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.7926 3 310 3.20.20.30
af_I6X9T8_35_343_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.7881 26 315 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A3D1SPQ4-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9711 35 189 GO:0008726
GO:0046306
AF-A0A352XQV2-F1-model_v4 LLM class F420-dependent oxidoreductase 0.956 1 225 GO:0008726
GO:0046306
AF-A0A3B9DM00-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9491 1 172 GO:0008726
GO:0046306
AF-A0A7V9SD28-F1-model_v4 TIGR03621 family F420-dependent LLM class oxidoreductase 0.948 3 315 GO:0008726
GO:0046306
AF-A0A536RTW2-F1-model_v4 TIGR03621 family F420-dependent LLM class oxidoreductase 0.9453 2 315 GO:0008726
GO:0046306

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pLDDT pTM Quality
95.03 0.92 High
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Predicted Structure (AlphaFold2)

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