F127142

General Info

Members Datasets Scaffolds Average Seq Length
125 82 250 113

Family's Representative Sequence

Representative Sequence 3300031344|Ga0265316_10240534|Ga0265316_102405344
Length 118
Sequence MTKESKPKTRKRAPKSTAAGRSLLTSLGQALAYARGEHVPGLRVTHVQVDRPAPVDLLAIRQNLGLSQSRFATRFGFTAATIRNWEQGRTRPDGPARILLAVIAHHPDAVEDALRKAG

Samples

Sample ID Description Type Environment
1 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
20 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
32 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
35 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
38 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
45 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
46 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
47 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
48 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
49 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
53 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
54 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
55 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
61 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
62 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
63 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
64 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
65 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
66 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
67 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
68 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
69 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
70 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
71 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
72 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
73 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
74 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
75 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
76 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
77 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
78 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
79 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
82 3300059655 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 152R_CD_T3_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.4
Metatranscriptomes 5.6
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.8
Rhizosphere 82.4
Stem 0
Stem Tuber 0
Unclassified 47.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265316_10240534 3300031344 Bacteria 1331
2 Ga0058862_10845901 3300004803 Unclassified 551
3 Ga0070683_100000052 3300005329 Bacteria 90261
4 Ga0070683_101386404 3300005329 Unclassified 676
5 Ga0068868_100850821 3300005338 Bacteria 826
6 Ga0070689_101366240 3300005340 Bacteria 639
7 Ga0070673_100492523 3300005364 Unclassified 1108
8 Ga0070713_100572206 3300005436 Bacteria 1071
9 Ga0070663_101484280 3300005455 Unclassified 602
10 Ga0070679_100067564 3300005530 Bacteria 3565
11 Ga0070684_100000566 3300005535 Bacteria 25521
12 Ga0068853_101061340 3300005539 Unclassified 781
13 Ga0070665_100305932 3300005548 Bacteria 1593
14 Ga0068859_100518594 3300005617 Bacteria 1287
15 Ga0068859_101840358 3300005617 Unclassified 669
16 Ga0068859_102100412 3300005617 Unclassified 624
17 Ga0068858_100984258 3300005842 Bacteria 826
18 Ga0097621_100386261 3300006237 Unclassified 1251
19 Ga0097621_100693117 3300006237 Bacteria 937
20 Ga0097620_100518622 3300006931 Bacteria 1287
21 Ga0097620_101840381 3300006931 Unclassified 669
22 Ga0097620_102100194 3300006931 Unclassified 624
23 Ga0105240_10549968 3300009093 Unclassified 1277
24 Ga0105245_11587388 3300009098 Bacteria 706
25 Ga0105241_12417398 3300009174 Unclassified 525
26 Ga0105242_10340977 3300009176 Bacteria 1381
27 Ga0105248_10223754 3300009177 Unclassified 2118
28 Ga0105248_10733083 3300009177 Bacteria 1115
29 Ga0105237_10288922 3300009545 Bacteria 1642
30 Ga0105239_10819751 3300010375 Bacteria 1066
31 Ga0105239_11471133 3300010375 Bacteria 787
32 Ga0157370_10225489 3300013104 Bacteria 1735
33 Ga0157370_10548507 3300013104 Unclassified 1060
34 Ga0157369_10388664 3300013105 Bacteria 1448
35 Ga0157369_10440932 3300013105 Bacteria 1349
36 Ga0157374_10190628 3300013296 Unclassified 2005
37 Ga0157378_12117517 3300013297 Unclassified 613
38 Ga0157378_12428989 3300013297 Unclassified 576
39 Ga0163163_10939252 3300014325 Unclassified 928
40 Ga0163163_13061062 3300014325 Unclassified 521
41 Ga0157380_13244833 3300014326 Unclassified 520
42 Ga0197907_10008925 3300020069 Bacteria 1204
43 Ga0206355_1562394 3300020076 Unclassified 922
44 Ga0206351_10292000 3300020077 Unclassified 507
45 Ga0206350_10610575 3300020080 Unclassified 799
46 Ga0213873_10019098 3300021358 Unclassified 1586
47 Ga0213874_10010823 3300021377 Unclassified 2294
48 Ga0213876_10051130 3300021384 Bacteria 2184
49 Ga0213876_10105735 3300021384 Bacteria 1493
50 Ga0213875_10000136 3300021388 Bacteria 81423
51 Ga0213875_10001817 3300021388 Bacteria 13277
52 Ga0213875_10029593 3300021388 Bacteria 2597
53 Ga0213875_10087720 3300021388 Bacteria 1451
54 Ga0213871_10009446 3300021441 Unclassified 2185
55 Ga0207684_10732092 3300025910 Bacteria 839
56 Ga0207695_10480601 3300025913 Bacteria 1124
57 Ga0207670_10068278 3300025936 Bacteria 2449
58 Ga0207661_10000065 3300025944 Bacteria 75600
59 Ga0207661_10380204 3300025944 Unclassified 1278
60 Ga0265338_10060882 3300028800 Bacteria 3312
61 Ga0265760_10268968 3300031090 Unclassified 595
62 Ga0265330_10376046 3300031235 Unclassified 600
63 Ga0265332_10485514 3300031238 Unclassified 512
64 Ga0265328_10425677 3300031239 Unclassified 523
65 Ga0265325_10226376 3300031241 Unclassified 854
66 Ga0265325_10294602 3300031241 Bacteria 725
67 Ga0265329_10048618 3300031242 Bacteria 1353
68 Ga0265331_10327400 3300031250 Unclassified 686
69 Ga0265316_10003055 3300031344 Bacteria 17088
70 Ga0265316_10011725 3300031344 Bacteria 7889
71 Ga0265316_10025006 3300031344 Bacteria 4989
72 Ga0265316_10062605 3300031344 Bacteria 2887
73 Ga0265316_10076165 3300031344 Bacteria 2578
74 Ga0265316_10120055 3300031344 Bacteria 1986
75 Ga0265316_10192576 3300031344 Bacteria 1514
76 Ga0265316_10199173 3300031344 Bacteria 1485
77 Ga0265316_10436414 3300031344 Unclassified 940
78 Ga0265316_10569958 3300031344 Unclassified 804
79 Ga0265314_10002054 3300031711 Bacteria 21261
80 Ga0265342_10136480 3300031712 Unclassified 1371
81 Ga0265342_10269172 3300031712 Bacteria 904
82 Ga0373923_0177248 3300035111 Unclassified 978
83 Ga0373933_0610255 3300035724 Unclassified 717
84 Ga0373947_0189579 3300035725 Bacteria 1341
85 Ga0373937_1507592 3300036401 Unclassified 620
86 Ga0373925_0014717 3300037068 Bacteria 5652
87 Ga0373925_0856688 3300037068 Unclassified 749
88 Ga0436364_0011309 3300037853 Unclassified 639
89 Ga0436364_0067341 3300037853 Unclassified 506
90 Ga0436364_0265928 3300037853 Bacteria 82453
91 Ga0436364_0278496 3300037853 Unclassified 699
92 Ga0436364_0369666 3300037853 Bacteria 5930
93 Ga0436364_0397361 3300037853 Unclassified 838
94 Ga0436364_0575716 3300037853 Bacteria 2698
95 Ga0436364_0576495 3300037853 Bacteria 13333
96 Ga0436364_0688195 3300037853 Unclassified 4388
97 Ga0436364_1434515 3300037853 Unclassified 1059
98 Ga0436364_1492485 3300037853 Unclassified 634
99 Ga0436365_0644607 3300039437 Bacteria 4779
100 Ga0436365_1019235 3300039437 Bacteria 3203
101 Ga0436360_1260924 3300039438 Bacteria 6091
102 Ga0436361_0817576 3300039447 Bacteria 684
103 Ga0436363_0214974 3300039450 Bacteria 3870
104 Ga0436362_0348869 3300039453 Bacteria 2773
105 Ga0436362_0503258 3300039453 Unclassified 1975
106 Ga0436362_1002011 3300039453 Bacteria 1652
107 Ga0451577_0279766 3300042876 Unclassified 1512
108 Ga0453684_0684582 3300044712 Bacteria 1116
109 Ga0466959_0412889 3300045049 Bacteria 917
110 Ga0495662_0638687 3300046476 Unclassified 520
111 Ga0495664_0699305 3300046477 Unclassified 599
112 Ga0495630_0369219 3300046517 Bacteria 1099
113 Ga0495652_0623356 3300046529 Bacteria 733
114 Ga0495586_0384354 3300046535 Unclassified 807
115 Ga0495621_0546603 3300046539 Unclassified 503
116 Ga0495658_0735989 3300046683 Unclassified 632
117 Ga0495613_0231648 3300046689 Bacteria 1294
118 Ga0495636_0068703 3300047318 Bacteria 1509
119 Ga0495674_0139157 3300047319 Bacteria 2041
120 Ga0495684_0276919 3300047471 Bacteria 1212
121 Ga0496115_0731761 3300048918 Unclassified 775
122 Ga0501036_1235966 3300049572 Unclassified 608
123 Ga0501040_0407063 3300049576 Unclassified 977
124 Ga0501073_1090215 3300049589 Unclassified 549
125 Ga0587114_071340 3300059655 Unclassified 630
126 Ga0265316_10240534
127 Ga0058862_10845901
128 Ga0070683_100000052
129 Ga0070683_101386404
130 Ga0068868_100850821
131 Ga0070689_101366240
132 Ga0070673_100492523
133 Ga0070713_100572206
134 Ga0070663_101484280
135 Ga0070679_100067564
136 Ga0070684_100000566
137 Ga0068853_101061340
138 Ga0070665_100305932
139 Ga0068859_100518594
140 Ga0068859_101840358
141 Ga0068859_102100412
142 Ga0068858_100984258
143 Ga0097621_100386261
144 Ga0097621_100693117
145 Ga0097620_100518622
146 Ga0097620_101840381
147 Ga0097620_102100194
148 Ga0105240_10549968
149 Ga0105245_11587388
150 Ga0105241_12417398
151 Ga0105242_10340977
152 Ga0105248_10223754
153 Ga0105248_10733083
154 Ga0105237_10288922
155 Ga0105239_10819751
156 Ga0105239_11471133
157 Ga0157370_10225489
158 Ga0157370_10548507
159 Ga0157369_10388664
160 Ga0157369_10440932
161 Ga0157374_10190628
162 Ga0157378_12117517
163 Ga0157378_12428989
164 Ga0163163_10939252
165 Ga0163163_13061062
166 Ga0157380_13244833
167 Ga0197907_10008925
168 Ga0206355_1562394
169 Ga0206351_10292000
170 Ga0206350_10610575
171 Ga0213873_10019098
172 Ga0213874_10010823
173 Ga0213876_10051130
174 Ga0213876_10105735
175 Ga0213875_10000136
176 Ga0213875_10001817
177 Ga0213875_10029593
178 Ga0213875_10087720
179 Ga0213871_10009446
180 Ga0207684_10732092
181 Ga0207695_10480601
182 Ga0207670_10068278
183 Ga0207661_10000065
184 Ga0207661_10380204
185 Ga0265338_10060882
186 Ga0265760_10268968
187 Ga0265330_10376046
188 Ga0265332_10485514
189 Ga0265328_10425677
190 Ga0265325_10226376
191 Ga0265325_10294602
192 Ga0265329_10048618
193 Ga0265331_10327400
194 Ga0265316_10003055
195 Ga0265316_10011725
196 Ga0265316_10025006
197 Ga0265316_10062605
198 Ga0265316_10076165
199 Ga0265316_10120055
200 Ga0265316_10192576
201 Ga0265316_10199173
202 Ga0265316_10436414
203 Ga0265316_10569958
204 Ga0265314_10002054
205 Ga0265342_10136480
206 Ga0265342_10269172
207 Ga0373923_0177248
208 Ga0373933_0610255
209 Ga0373947_0189579
210 Ga0373937_1507592
211 Ga0373925_0014717
212 Ga0373925_0856688
213 Ga0436364_0011309
214 Ga0436364_0067341
215 Ga0436364_0265928
216 Ga0436364_0278496
217 Ga0436364_0369666
218 Ga0436364_0397361
219 Ga0436364_0575716
220 Ga0436364_0576495
221 Ga0436364_0688195
222 Ga0436364_1434515
223 Ga0436364_1492485
224 Ga0436365_0644607
225 Ga0436365_1019235
226 Ga0436360_1260924
227 Ga0436361_0817576
228 Ga0436363_0214974
229 Ga0436362_0348869
230 Ga0436362_0503258
231 Ga0436362_1002011
232 Ga0451577_0279766
233 Ga0453684_0684582
234 Ga0466959_0412889
235 Ga0495662_0638687
236 Ga0495664_0699305
237 Ga0495630_0369219
238 Ga0495652_0623356
239 Ga0495586_0384354
240 Ga0495621_0546603
241 Ga0495658_0735989
242 Ga0495613_0231648
243 Ga0495636_0068703
244 Ga0495674_0139157
245 Ga0495684_0276919
246 Ga0496115_0731761
247 Ga0501036_1235966
248 Ga0501040_0407063
249 Ga0501073_1090215
250 Ga0587114_071340

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01381

HTH_3

Helix-turn-helix

57

101

0.94

PF13560

HTH_31

Helix-turn-helix domain

56

116

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ppx-assembly1.cif.gz_A crystal structure of a hth xre-family like protein from agrobacterium tumefaciens 0.9419 48 107
2ppx-assembly1.cif.gz_A crystal structure of a hth xre-family like protein from agrobacterium tumefaciens 0.8988 48 107
5j9i-assembly4.cif.gz_G crystal structure of the higa2 antitoxin c-terminal domain 0.8984 48 106
5j9i-assembly2.cif.gz_C crystal structure of the higa2 antitoxin c-terminal domain 0.8914 48 109
7t8i-assembly1.cif.gz_B crystal structure of the immr transcriptional regulator dna-binding domain of bacillus subtilis 0.8662 50 98
ID Description Score Start End Superfamily
2ppxA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9622 48 107 1.10.260.40
2ppxA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9321 48 107 1.10.260.40
af_Q57720_1_65_1.10.260.40 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8998 49 98 1.10.260.40
af_Q58006_80_170_1.10.260.40 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8954 50 98 1.10.260.40
3qq6B00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8135 49 98 1.10.260.40
ID Description Score Start End GO Terms
AF-A0A7V9HM25-F1-model_v4 Helix-turn-helix domain-containing protein 0.9982 48 108 GO:0003677
AF-A0A1H8XV27-F1-model_v4 Antitoxin component of toxin-antitoxin system, MqsA 0.9981 48 108 GO:0003677
AF-A0A5C8SBQ8-F1-model_v4 Helix-turn-helix domain-containing protein 0.9943 45 108 GO:0003677
AF-A0A5C8SNQ3-F1-model_v4 deleted 0.9936 45 108
AF-A0A6A7LW96-F1-model_v4 Helix-turn-helix domain-containing protein 0.9918 49 109 GO:0003677

Map