F126819

General Info

Members Datasets Scaffolds Average Seq Length
125 79 125 400

Family's Representative Sequence

Representative Sequence 3300025927|Ga0207687_10000207|Ga0207687_100002074
Length 386
Sequence VGVELSSRPAGVPPGTAAADLLAVDLVGLAARALSATSADVDRSLLARRRSLSDLAVLLSPAAGGRLEDLAAAASRAAVQRFGRVVRLFTPLYLSNECVSVCTYCGFSAGNDIARRTLTVDEVVAEGRELVARGFRHVLLVAGEHARIVSKDYLVSCVEALAPVVPSLSVEVQVWDVGTYRRLVAAGCEGLVVYQEAYDRGVYESCHLKGKKRNYDWRLAAPDRGAEAGMRSLGIGALLGLDADWRREVLAVGAHAGALLRRWWRCEVSVSLPRLRPAAGDFQAARPVTDAELVQTVCALRLCLPTVGLSLSTREAPRLRDGLVRLGVSSMSAGSHTEPGGYAAPSSAERQFEIADTRSPSEIAAMLRSIGYDPVWKDTIGARRLV

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
4 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
14 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
24 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
27 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
35 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
36 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
37 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
40 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
41 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
42 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
43 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
44 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
45 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
49 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
50 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
51 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
52 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
53 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
54 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
55 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
56 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
57 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
58 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
59 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
60 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
61 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
62 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
63 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
64 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
65 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
66 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
67 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
68 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
69 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
70 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
71 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
72 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
73 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
74 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
75 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
76 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
77 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
78 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
79 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100001197 3300005330 Bacteria 13399
2 Ga0070689_100343455 3300005340 Bacteria 1250
3 Ga0070687_100111778 3300005343 Unclassified 1547
4 Ga0070705_100110986 3300005440 Bacteria 1752
5 Ga0070694_100083736 3300005444 Bacteria 2223
6 Ga0070708_100020564 3300005445 Bacteria 5568
7 Ga0070708_100031122 3300005445 Bacteria 4616
8 Ga0070707_100270362 3300005468 Unclassified 1652
9 Ga0070698_100030950 3300005471 Bacteria 5550
10 Ga0070686_100076338 3300005544 Bacteria 2206
11 Ga0070704_100057982 3300005549 Bacteria 2756
12 Ga0068855_100106118 3300005563 Bacteria 3229
13 Ga0068859_100010058 3300005617 Bacteria 9539
14 Ga0070712_100048897 3300006175 Bacteria 2934
15 Ga0097621_100048160 3300006237 Bacteria 3456
16 Ga0097621_100147080 3300006237 Bacteria 2018
17 Ga0075428_100453772 3300006844 Unclassified 1373
18 Ga0075431_100030573 3300006847 Bacteria 5548
19 Ga0097620_100010058 3300006931 Bacteria 9539
20 Ga0105240_10004143 3300009093 Bacteria 22214
21 Ga0105240_10351039 3300009093 Bacteria 1673
22 Ga0111539_10177557 3300009094 Bacteria 2488
23 Ga0111539_10188291 3300009094 Bacteria 2409
24 Ga0105245_10000413 3300009098 Bacteria 39834
25 Ga0114129_10240862 3300009147 Bacteria 2432
26 Ga0105242_10100036 3300009176 Bacteria 2455
27 Ga0105248_10124510 3300009177 Bacteria 2908
28 Ga0157374_10414070 3300013296 Unclassified 1346
29 Ga0157375_10000080 3300013308 Bacteria 96665
30 Ga0163163_10000935 3300014325 Bacteria 24787
31 Ga0163163_10292565 3300014325 Bacteria 1681
32 Ga0207680_10099009 3300025903 Unclassified 1870
33 Ga0207695_10039782 3300025913 Bacteria 5051
34 Ga0207695_10308640 3300025913 Bacteria 1472
35 Ga0207663_10000221 3300025916 Bacteria 25463
36 Ga0207687_10000207 3300025927 Bacteria 39815
37 Ga0207670_10075636 3300025936 Unclassified 2341
38 Ga0207667_10169373 3300025949 Bacteria 2245
39 Ga0207667_10225929 3300025949 Bacteria 1918
40 Ga0207674_10005940 3300026116 Bacteria 14439
41 Ga0265337_1000085 3300028556 Bacteria 45359
42 Ga0265337_1002685 3300028556 Bacteria 7990
43 Ga0265326_10008371 3300028558 Unclassified 3121
44 Ga0265318_10006184 3300028577 Bacteria 5538
45 Ga0265336_10001566 3300028666 Bacteria 10267
46 Ga0265336_10020236 3300028666 Unclassified 2138
47 Ga0265338_10000050 3300028800 Bacteria 213659
48 Ga0265338_10000105 3300028800 Bacteria 156108
49 Ga0265338_10000135 3300028800 Bacteria 135743
50 Ga0265338_10000399 3300028800 Bacteria 77917
51 Ga0265338_10003249 3300028800 Bacteria 23109
52 Ga0265338_10005222 3300028800 Bacteria 17034
53 Ga0265338_10005630 3300028800 Bacteria 16264
54 Ga0265338_10009218 3300028800 Bacteria 11816
55 Ga0265338_10012670 3300028800 Bacteria 9595
56 Ga0265338_10039937 3300028800 Unclassified 4415
57 Ga0265338_10078147 3300028800 Bacteria 2793
58 Ga0265338_10147581 3300028800 Bacteria 1832
59 Ga0265338_10150913 3300028800 Unclassified 1805
60 Ga0265324_10014936 3300029957 Bacteria 2862
61 Ga0265328_10033302 3300031239 Bacteria 1911
62 Ga0265320_10001242 3300031240 Bacteria 18711
63 Ga0265320_10020895 3300031240 Unclassified 3535
64 Ga0265320_10023618 3300031240 Unclassified 3269
65 Ga0265320_10054102 3300031240 Bacteria 1937
66 Ga0265325_10005127 3300031241 Bacteria 8149
67 Ga0265329_10001640 3300031242 Bacteria 10685
68 Ga0265340_10000248 3300031247 Bacteria 28079
69 Ga0265339_10011780 3300031249 Bacteria 5366
70 Ga0265339_10018378 3300031249 Unclassified 4122
71 Ga0265327_10007867 3300031251 Bacteria 8097
72 Ga0265316_10010405 3300031344 Bacteria 8479
73 Ga0265316_10025461 3300031344 Bacteria 4936
74 Ga0265316_10041642 3300031344 Unclassified 3674
75 Ga0265316_10063694 3300031344 Bacteria 2858
76 Ga0265316_10066356 3300031344 Bacteria 2793
77 Ga0265316_10153314 3300031344 Unclassified 1725
78 Ga0265314_10001199 3300031711 Bacteria 29774
79 Ga0265314_10021893 3300031711 Unclassified 4903
80 Ga0265342_10040578 3300031712 Bacteria 2822
81 Ga0265342_10099140 3300031712 Bacteria 1662
82 Ga0316578_10052969 3300031728 Bacteria 2378
83 Ga0316577_10030190 3300031733 Bacteria 3027
84 Ga0373956_0016738 3300035119 Bacteria 3081
85 Ga0373947_0012244 3300035725 Bacteria 4914
86 Ga0373937_0239215 3300036401 Bacteria 1710
87 Ga0373925_0014766 3300037068 Bacteria 5643
88 Ga0451577_0013289 3300042876 Bacteria 7712
89 Ga0451577_0272698 3300042876 Unclassified 1532
90 Ga0453684_0000001 3300044712 Bacteria 2623166
91 Ga0453684_0023700 3300044712 Bacteria 9018
92 Ga0451576_0074129 3300045051 Bacteria 3542
93 Ga0451576_0096504 3300045051 Bacteria 3075
94 Ga0451576_0159054 3300045051 Bacteria 2357
95 Ga0451576_0330554 3300045051 Unclassified 1595
96 Ga0451576_0398766 3300045051 Unclassified 1442
97 Ga0495592_0000023 3300046454 Bacteria 137490
98 Ga0495641_0007092 3300046461 Bacteria 7094
99 Ga0495639_0039828 3300046475 Bacteria 2114
100 Ga0495662_0015921 3300046476 Bacteria 3649
101 Ga0495618_0007681 3300046514 Bacteria 6523
102 Ga0495630_0015772 3300046517 Bacteria 5522
103 Ga0495630_0023596 3300046517 Bacteria 4547
104 Ga0495666_0055604 3300046526 Bacteria 1896
105 Ga0495652_0054023 3300046529 Bacteria 3422
106 Ga0495640_0054120 3300046533 Bacteria 2751
107 Ga0495640_0159322 3300046533 Bacteria 1447
108 Ga0495640_0173359 3300046533 Bacteria 1377
109 Ga0495586_0001973 3300046535 Bacteria 11184
110 Ga0495586_0002635 3300046535 Bacteria 9703
111 Ga0495586_0027832 3300046535 Bacteria 3024
112 Ga0495667_0052146 3300046559 Unclassified 2696
113 Ga0495667_0081300 3300046559 Unclassified 2106
114 Ga0495634_0008427 3300046642 Bacteria 7675
115 Ga0495599_0007272 3300046678 Bacteria 6705
116 Ga0495599_0022248 3300046678 Bacteria 3957
117 Ga0495647_0028267 3300046681 Bacteria 2066
118 Ga0495658_0040402 3300046683 Bacteria 2593
119 Ga0495613_0002695 3300046689 Bacteria 13332
120 Ga0495613_0031804 3300046689 Bacteria 3919
121 Ga0495600_0155000 3300046809 Bacteria 1482
122 Ga0495674_0007272 3300047319 Bacteria 10592
123 Ga0501044_0077652 3300049823 Bacteria 3367
124 nmdc:mga06r32_113092_c1 3300050510 Bacteria 2672
125 nmdc:mga08y16_192960_c1 3300050511 Bacteria 2112

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028800 Ga0265338_10003249 Ga0265338_1000324920 360
2 3300031344 Ga0265316_10010405 Ga0265316_100104057 360
3 3300044712 Ga0453684_0000001 Ga0453684_0000001_2604595_2605740 361
4 3300025936 Ga0207670_10075636 Ga0207670_100756363 362
5 3300028666 Ga0265336_10020236 Ga0265336_100202363 365
6 3300005445 Ga0070708_100031122 Ga0070708_1000311225 368
7 3300005468 Ga0070707_100270362 Ga0070707_1002703622 368
8 3300005471 Ga0070698_100030950 Ga0070698_1000309505 368
9 3300009098 Ga0105245_10000413 Ga0105245_1000041335 370
10 3300009147 Ga0114129_10240862 Ga0114129_102408622 370
11 3300025927 Ga0207687_10000207 Ga0207687_100002074 370
12 3300009176 Ga0105242_10100036 Ga0105242_101000364 373
13 3300009093 Ga0105240_10004143 Ga0105240_1000414313 379
14 3300025916 Ga0207663_10000221 Ga0207663_100002218 380
15 3300028577 Ga0265318_10006184 Ga0265318_100061845 380
16 3300028800 Ga0265338_10000105 Ga0265338_10000105111 380
17 3300028800 Ga0265338_10005222 Ga0265338_1000522212 380
18 3300028800 Ga0265338_10009218 Ga0265338_100092187 380
19 3300029957 Ga0265324_10014936 Ga0265324_100149362 380
20 3300006847 Ga0075431_100030573 Ga0075431_1000305733 383
21 3300050510 nmdc:mga06r32_113092_c1 nmdc:mga06r32_113092_c1_500_1657 383
22 3300005440 Ga0070705_100110986 Ga0070705_1001109862 385
23 3300028800 Ga0265338_10000135 Ga0265338_10000135107 389
24 3300042876 Ga0451577_0272698 Ga0451577_0272698_188_1381 392
25 3300005444 Ga0070694_100083736 Ga0070694_1000837361 394
26 3300005544 Ga0070686_100076338 Ga0070686_1000763382 394
27 3300005549 Ga0070704_100057982 Ga0070704_1000579822 394
28 3300006844 Ga0075428_100453772 Ga0075428_1004537721 394
29 3300014325 Ga0163163_10292565 Ga0163163_102925652 394
30 3300025913 Ga0207695_10039782 Ga0207695_100397821 394
31 3300031240 Ga0265320_10023618 Ga0265320_100236183 394
32 3300045051 Ga0451576_0096504 Ga0451576_0096504_1746_2960 394
33 3300005330 Ga0070690_100001197 Ga0070690_10000119711 395
34 3300005340 Ga0070689_100343455 Ga0070689_1003434551 395
35 3300005343 Ga0070687_100111778 Ga0070687_1001117781 395
36 3300005445 Ga0070708_100020564 Ga0070708_1000205642 395
37 3300005563 Ga0068855_100106118 Ga0068855_1001061184 395
38 3300005617 Ga0068859_100010058 Ga0068859_1000100582 395
39 3300006175 Ga0070712_100048897 Ga0070712_1000488973 395
40 3300006237 Ga0097621_100048160 Ga0097621_1000481604 395
41 3300006237 Ga0097621_100147080 Ga0097621_1001470802 395
42 3300006931 Ga0097620_100010058 Ga0097620_1000100582 395
43 3300009093 Ga0105240_10351039 Ga0105240_103510392 395
44 3300009094 Ga0111539_10177557 Ga0111539_101775571 395
45 3300009094 Ga0111539_10188291 Ga0111539_101882912 395
46 3300009177 Ga0105248_10124510 Ga0105248_101245101 395
47 3300013296 Ga0157374_10414070 Ga0157374_104140701 395
48 3300013308 Ga0157375_10000080 Ga0157375_1000008013 395
49 3300014325 Ga0163163_10000935 Ga0163163_100009352 395
50 3300025903 Ga0207680_10099009 Ga0207680_100990092 395
51 3300025913 Ga0207695_10308640 Ga0207695_103086401 395
52 3300025949 Ga0207667_10169373 Ga0207667_101693732 395
53 3300025949 Ga0207667_10225929 Ga0207667_102259292 395
54 3300026116 Ga0207674_10005940 Ga0207674_100059403 395
55 3300028556 Ga0265337_1000085 Ga0265337_10000852 395
56 3300028556 Ga0265337_1002685 Ga0265337_10026858 395
57 3300028558 Ga0265326_10008371 Ga0265326_100083711 395
58 3300028666 Ga0265336_10001566 Ga0265336_100015667 395
59 3300028800 Ga0265338_10000050 Ga0265338_1000005046 395
60 3300028800 Ga0265338_10000399 Ga0265338_1000039976 395
61 3300028800 Ga0265338_10005630 Ga0265338_1000563014 395
62 3300028800 Ga0265338_10012670 Ga0265338_100126704 395
63 3300028800 Ga0265338_10039937 Ga0265338_100399373 395
64 3300028800 Ga0265338_10078147 Ga0265338_100781472 395
65 3300028800 Ga0265338_10147581 Ga0265338_101475811 395
66 3300028800 Ga0265338_10150913 Ga0265338_101509132 395
67 3300031239 Ga0265328_10033302 Ga0265328_100333021 395
68 3300031240 Ga0265320_10001242 Ga0265320_100012422 395
69 3300031240 Ga0265320_10020895 Ga0265320_100208954 395
70 3300031240 Ga0265320_10054102 Ga0265320_100541023 395
71 3300031241 Ga0265325_10005127 Ga0265325_100051277 395
72 3300031242 Ga0265329_10001640 Ga0265329_100016404 395
73 3300031247 Ga0265340_10000248 Ga0265340_1000024812 395
74 3300031249 Ga0265339_10011780 Ga0265339_100117807 395
75 3300031249 Ga0265339_10018378 Ga0265339_100183782 395
76 3300031251 Ga0265327_10007867 Ga0265327_100078678 395
77 3300031344 Ga0265316_10025461 Ga0265316_100254612 395
78 3300031344 Ga0265316_10041642 Ga0265316_100416425 395
79 3300031344 Ga0265316_10063694 Ga0265316_100636943 395
80 3300031344 Ga0265316_10066356 Ga0265316_100663563 395
81 3300031344 Ga0265316_10153314 Ga0265316_101533142 395
82 3300031711 Ga0265314_10001199 Ga0265314_1000119910 395
83 3300031711 Ga0265314_10021893 Ga0265314_100218931 395
84 3300031712 Ga0265342_10040578 Ga0265342_100405782 395
85 3300031712 Ga0265342_10099140 Ga0265342_100991401 395
86 3300031728 Ga0316578_10052969 Ga0316578_100529693 395
87 3300031733 Ga0316577_10030190 Ga0316577_100301902 395
88 3300035119 Ga0373956_0016738 Ga0373956_0016738_1484_2713 395
89 3300035725 Ga0373947_0012244 Ga0373947_0012244_1546_2778 395
90 3300036401 Ga0373937_0239215 Ga0373937_0239215_211_1440 395
91 3300037068 Ga0373925_0014766 Ga0373925_0014766_3852_5084 395
92 3300042876 Ga0451577_0013289 Ga0451577_0013289_5566_6765 395
93 3300044712 Ga0453684_0023700 Ga0453684_0023700_6651_7847 395
94 3300045051 Ga0451576_0074129 Ga0451576_0074129_1615_2814 395
95 3300045051 Ga0451576_0159054 Ga0451576_0159054_514_1707 395
96 3300045051 Ga0451576_0330554 Ga0451576_0330554_262_1497 395
97 3300045051 Ga0451576_0398766 Ga0451576_0398766_86_1294 395
98 3300046454 Ga0495592_0000023 Ga0495592_0000023_43896_45095 395
99 3300046461 Ga0495641_0007092 Ga0495641_0007092_5724_6926 395
100 3300046475 Ga0495639_0039828 Ga0495639_0039828_502_1701 395
101 3300046476 Ga0495662_0015921 Ga0495662_0015921_1186_2385 395
102 3300046514 Ga0495618_0007681 Ga0495618_0007681_3910_5139 395
103 3300046517 Ga0495630_0015772 Ga0495630_0015772_443_1675 395
104 3300046517 Ga0495630_0023596 Ga0495630_0023596_998_2197 395
105 3300046526 Ga0495666_0055604 Ga0495666_0055604_15_1214 395
106 3300046529 Ga0495652_0054023 Ga0495652_0054023_1263_2462 395
107 3300046533 Ga0495640_0054120 Ga0495640_0054120_182_1411 395
108 3300046533 Ga0495640_0159322 Ga0495640_0159322_44_1243 395
109 3300046533 Ga0495640_0173359 Ga0495640_0173359_155_1357 395
110 3300046535 Ga0495586_0001973 Ga0495586_0001973_954_2153 395
111 3300046535 Ga0495586_0002635 Ga0495586_0002635_3579_4808 395
112 3300046535 Ga0495586_0027832 Ga0495586_0027832_1436_2638 395
113 3300046559 Ga0495667_0052146 Ga0495667_0052146_774_1976 395
114 3300046559 Ga0495667_0081300 Ga0495667_0081300_376_1572 395
115 3300046642 Ga0495634_0008427 Ga0495634_0008427_2713_3942 395
116 3300046678 Ga0495599_0007272 Ga0495599_0007272_4791_5990 395
117 3300046678 Ga0495599_0022248 Ga0495599_0022248_2413_3606 395
118 3300046681 Ga0495647_0028267 Ga0495647_0028267_763_1965 395
119 3300046683 Ga0495658_0040402 Ga0495658_0040402_818_2020 395
120 3300046689 Ga0495613_0002695 Ga0495613_0002695_5727_6929 395
121 3300046689 Ga0495613_0031804 Ga0495613_0031804_1835_3064 395
122 3300046809 Ga0495600_0155000 Ga0495600_0155000_125_1327 395
123 3300047319 Ga0495674_0007272 Ga0495674_0007272_6619_7818 395
124 3300049823 Ga0501044_0077652 Ga0501044_0077652_770_1972 395
125 3300050511 nmdc:mga08y16_192960_c1 nmdc:mga08y16_192960_c1_895_2091 395

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06968

BATS

Biotin and Thiamin Synthesis associated domain

271

373

0.96

PF04055

Radical_SAM

Radical SAM superfamily

92

252

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pd2-assembly2.cif.gz_B crystal structure of the substrate-free radical sam tyrosine lyase thih (2-iminoacetate synthase) from thermosinus carboxydivorans 0.9462 1 391
7pd2-assembly2.cif.gz_B crystal structure of the substrate-free radical sam tyrosine lyase thih (2-iminoacetate synthase) from thermosinus carboxydivorans 0.9437 1 391
4wcx-assembly2.cif.gz_C crystal structure of hydg: a maturase of the [fefe]-hydrogenase 0.8984 12 387
4wcx-assembly1.cif.gz_A crystal structure of hydg: a maturase of the [fefe]-hydrogenase 0.8971 12 387
4rtb-assembly1.cif.gz_A x-ray structure of the fefe-hydrogenase maturase hydg from carboxydothermus hydrogenoformans 0.8877 12 384
ID Description Score Start End Superfamily
af_P30140_10_369_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.957 10 391 3.20.20.70
af_P30140_10_369_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9492 10 391 3.20.20.70
af_Q2FVJ7_11_319_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8361 35 384 3.20.20.70
af_Q58014_2_298_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.831 50 317 3.20.20.70
af_Q2FVJ7_11_319_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8261 35 384 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A2A2REP4-F1-model_v4 2-iminoacetate synthase ThiH 0.9949 1 302 GO:0003824
GO:0042364
GO:0044272
GO:0046872
GO:0051539
AF-A0A2A2REP4-F1-model_v4 2-iminoacetate synthase ThiH 0.9916 1 302 GO:0003824
GO:0042364
GO:0044272
GO:0046872
GO:0051539
AF-A0A382J132-F1-model_v4 Radical SAM core domain-containing protein 0.9852 1 221 GO:0003824
GO:0046872
GO:0051536
AF-A0A447RBD5-F1-model_v4 Thiamine biosynthesis protein ThiH (EC 4.1.99.19) 0.9834 43 317 GO:0005506
GO:0036355
GO:0051539
AF-A0A7V2SVH3-F1-model_v4 2-iminoacetate synthase 0.983 1 280 GO:0003824
GO:0005506
GO:0009228
GO:0051539

Feature Viewer

pLDDT pTM Quality
85.56 0.88 High
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Predicted Structure (AlphaFold2)

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