F122428

General Info

Members Datasets Scaffolds Average Seq Length
124 101 248 336

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10562987|Ga0105239_105629871
Length 382
Sequence MSPAWSVISGARSPALSSRAATICRLGERETGICDEIWKQQENSMPEMNRQVLLKRRPNGMPVPDDFVIVEGPLSEPNDGQVLLRGIYLSLDPYMRGRISGQRSYATPTKIGDVIEGRVVGQVTRSRHPGFREGDFASGGYGWQTHSVVHGDALTELDPAQAPLSTSLGILGMPGLTAYVGLKTIGQPKAGETVVISAASGAVGAVAGQLTKRDGCHVVGIAGGAEKCRYVTEELGFDGCVDHRRADLGAALEAACPKGIDVYFENVGGDVQRAVYPLLNDFGRMIMCGMIAEYNDATPRPGPSLVAAVRKRLKIQGFIVSDHAALRSEYLEMAAPLVRSGQLKYREDIVEGIDNAPEAFIGLLQGKNFGKLIIKLGADPTR

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
34 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
35 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
36 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
52 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
53 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
54 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
58 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
59 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
60 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
61 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
62 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
63 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
66 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
67 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
68 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
69 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
70 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
71 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
72 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
73 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
74 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
75 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
76 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
77 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
78 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
79 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
80 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
81 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
82 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
83 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
84 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
87 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
88 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
89 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
90 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
91 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
92 2643221615 Nocardioides sp. Root224 Isolate Unclassified
93 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
94 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
95 2643221718 Rhizobium sp. Root268 Isolate Unclassified
96 2738541293 Rhizobium sp. GV031 Isolate Unclassified
97 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
98 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
99 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
100 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
101 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.94
Metatranscriptomes 0
Isolates 8.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.81
Nodule 0
Rhizoplane 0.81
Rhizosphere 82.26
Stem 0
Stem Tuber 0
Unclassified 3.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10562987 3300010375 Bacteria 1298
2 JGI24739J22299_10000187 3300001989 Bacteria 20509
3 JGI25406J46586_10000256 3300003203 Bacteria 23743
4 Ga0055524_1000388 3300003775 Bacteria 37900
5 Ga0065712_10000606 3300005290 Bacteria 17755
6 Ga0070690_100051244 3300005330 Bacteria 2635
7 Ga0070666_10155456 3300005335 Bacteria 1597
8 Ga0070669_100014066 3300005353 Bacteria 5691
9 Ga0070671_100047093 3300005355 Bacteria 3586
10 Ga0070714_100060049 3300005435 Bacteria 3262
11 Ga0070713_100023701 3300005436 Bacteria 4768
12 Ga0070713_100162199 3300005436 Bacteria 1996
13 Ga0070710_10002234 3300005437 Bacteria 9156
14 Ga0070710_10064633 3300005437 Bacteria 2093
15 Ga0070711_100022207 3300005439 Bacteria 4110
16 Ga0070706_100045451 3300005467 Bacteria 4056
17 Ga0070706_100377334 3300005467 Bacteria 1321
18 Ga0070707_100011051 3300005468 Bacteria 8408
19 Ga0070707_100134329 3300005468 Bacteria 2407
20 Ga0070698_100078553 3300005471 Bacteria 3299
21 Ga0070699_100236691 3300005518 Bacteria 1629
22 Ga0070684_100227726 3300005535 Bacteria 1702
23 Ga0070664_100373091 3300005564 Unclassified 1301
24 Ga0068856_100292384 3300005614 Bacteria 1646
25 Ga0068859_100165417 3300005617 Unclassified 2292
26 Ga0068858_100531428 3300005842 Bacteria 1138
27 Ga0081539_10000608 3300005985 Bacteria 72799
28 Ga0070717_10000641 3300006028 Bacteria 22499
29 Ga0070717_10086195 3300006028 Bacteria 2643
30 Ga0070715_10022100 3300006163 Bacteria 2477
31 Ga0070716_100037050 3300006173 Bacteria 2693
32 Ga0070712_100026369 3300006175 Bacteria 3870
33 Ga0075428_100149022 3300006844 Bacteria 2542
34 Ga0097620_100165422 3300006931 Unclassified 2292
35 Ga0111539_10007447 3300009094 Bacteria 14023
36 Ga0111539_10020757 3300009094 Bacteria 8086
37 Ga0111539_10367021 3300009094 Bacteria 1676
38 Ga0157369_10000203 3300013105 Bacteria 82075
39 Ga0163163_10037729 3300014325 Bacteria 4702
40 Ga0163163_10248216 3300014325 Bacteria 1830
41 Ga0157377_10091000 3300014745 Bacteria 1802
42 Ga0163161_10171893 3300017792 Bacteria 1657
43 Ga0213875_10000098 3300021388 Bacteria 98684
44 Ga0213875_10005295 3300021388 Bacteria 6943
45 Ga0213875_10041567 3300021388 Bacteria 2163
46 Ga0207692_10007693 3300025898 Bacteria 4426
47 Ga0207680_10136484 3300025903 Bacteria 1622
48 Ga0207693_10011548 3300025915 Bacteria 7142
49 Ga0207663_10038475 3300025916 Bacteria 2892
50 Ga0207662_10163326 3300025918 Bacteria 1424
51 Ga0207646_10155790 3300025922 Bacteria 2060
52 Ga0207681_10010369 3300025923 Bacteria 5702
53 Ga0207700_10066024 3300025928 Bacteria 2763
54 Ga0207700_10119599 3300025928 Bacteria 2134
55 Ga0207665_10138332 3300025939 Bacteria 1734
56 Ga0207703_10466229 3300026035 Bacteria 1182
57 Ga0207708_10059447 3300026075 Bacteria 2918
58 Ga0207702_10311025 3300026078 Bacteria 1498
59 Ga0207641_10136167 3300026088 Bacteria 2211
60 Ga0207428_10002691 3300027907 Bacteria 17705
61 Ga0265313_10028163 3300031595 Bacteria 2926
62 Ga0316575_10107324 3300031665 Bacteria 1138
63 Ga0316577_10054920 3300031733 Bacteria 2223
64 Ga0373943_0071102 3300035170 Bacteria 1762
65 Ga0373933_0011726 3300035724 Bacteria 4838
66 Ga0373937_0022249 3300036401 Bacteria 5698
67 Ga0316584_0150054 3300036712 Bacteria 1735
68 Ga0436364_0687884 3300037853 Bacteria 2964
69 Ga0436364_1309894 3300037853 Bacteria 49139
70 Ga0436364_1390920 3300037853 Bacteria 113944
71 Ga0436364_1421151 3300037853 Bacteria 5786
72 Ga0436360_0653222 3300039438 Bacteria 1529
73 Ga0436360_1020142 3300039438 Bacteria 2652
74 Ga0436363_0685188 3300039450 Bacteria 1314
75 Ga0436363_0886429 3300039450 Bacteria 2779
76 Ga0436362_0457800 3300039453 Bacteria 1934
77 Ga0451577_0003354 3300042876 Bacteria 17943
78 Ga0451577_0052824 3300042876 Bacteria 3629
79 Ga0451577_0435070 3300042876 Bacteria 1191
80 Ga0453684_0005422 3300044712 Bacteria 25271
81 Ga0453684_0335436 3300044712 Bacteria 1709
82 Ga0466960_0028912 3300044901 Bacteria 2540
83 Ga0466960_0056593 3300044901 Bacteria 1910
84 Ga0451576_0015693 3300045051 Bacteria 8385
85 Ga0451576_0321275 3300045051 Bacteria 1620
86 Ga0495606_0061753 3300046507 Bacteria 2395
87 Ga0495640_0080418 3300046533 Bacteria 2167
88 Ga0495586_0035174 3300046535 Bacteria 2691
89 Ga0495597_0000116 3300046542 Bacteria 72210
90 Ga0495667_0045926 3300046559 Bacteria 2889
91 Ga0495635_0114828 3300046663 Bacteria 1838
92 Ga0495599_0107645 3300046678 Bacteria 1737
93 Ga0495600_0074414 3300046809 Bacteria 2218
94 Ga0495680_0123498 3300047322 Bacteria 1909
95 Ga0495602_0293424 3300048088 Bacteria 1193
96 Ga0496106_0059248 3300048909 Bacteria 2900
97 Ga0496122_0000924 3300048925 Bacteria 53653
98 Ga0496122_0010666 3300048925 Bacteria 9433
99 Ga0496123_0028312 3300048926 Bacteria 4151
100 Ga0496126_0043679 3300048929 Bacteria 4132
101 Ga0501075_0109400 3300049591 Bacteria 2101
102 Ga0501211_003078 3300049658 Bacteria 1732
103 Ga0501235_000238 3300049669 Bacteria 10088
104 Ga0501080_0439637 3300049742 Bacteria 1170
105 Ga0501264_006222 3300049761 Unclassified 1098
106 Ga0501283_009426 3300049779 Bacteria 1423
107 nmdc:mga09592_110194_c1 3300050508 Bacteria 2362
108 nmdc:mga06r32_67425_c1 3300050510 Bacteria 3455
109 nmdc:mga08y16_43034_c1 3300050511 Bacteria 4731
110 nmdc:mga08y16_525431_c1 3300050511 Bacteria 1200
111 nmdc:mga0n895_458498_c1 3300050512 Bacteria 1287
112 Ga0495601_0002257 3300053077 Bacteria 10867
113 Ga0495595_0039048 3300053084 Bacteria 2165
114 Ga0495619_0048131 3300053085 Bacteria 2809
115 2644089973 2643221615 Bacteria 5487866
116 2644211100 2643221637 Bacteria 5345260
117 2644319818 2643221657 Bacteria 5490246
118 2644654755 2643221718 Bacteria 5345506
119 2738804904 2738541293 Bacteria 7065685
120 2883577610 2883577096 Bacteria 4709178
121 2894774826 2894772417 Bacteria 5305674
122 2916974089 2916971899 Bacteria 4250608
123 2929200747 2929199973 Bacteria 7260745
124 8055913964 8055909800 Bacteria 7278581
125 Ga0105239_10562987
126 JGI24739J22299_10000187
127 JGI25406J46586_10000256
128 Ga0055524_1000388
129 Ga0065712_10000606
130 Ga0070690_100051244
131 Ga0070666_10155456
132 Ga0070669_100014066
133 Ga0070671_100047093
134 Ga0070714_100060049
135 Ga0070713_100023701
136 Ga0070713_100162199
137 Ga0070710_10002234
138 Ga0070710_10064633
139 Ga0070711_100022207
140 Ga0070706_100045451
141 Ga0070706_100377334
142 Ga0070707_100011051
143 Ga0070707_100134329
144 Ga0070698_100078553
145 Ga0070699_100236691
146 Ga0070684_100227726
147 Ga0070664_100373091
148 Ga0068856_100292384
149 Ga0068859_100165417
150 Ga0068858_100531428
151 Ga0081539_10000608
152 Ga0070717_10000641
153 Ga0070717_10086195
154 Ga0070715_10022100
155 Ga0070716_100037050
156 Ga0070712_100026369
157 Ga0075428_100149022
158 Ga0097620_100165422
159 Ga0111539_10007447
160 Ga0111539_10020757
161 Ga0111539_10367021
162 Ga0157369_10000203
163 Ga0163163_10037729
164 Ga0163163_10248216
165 Ga0157377_10091000
166 Ga0163161_10171893
167 Ga0213875_10000098
168 Ga0213875_10005295
169 Ga0213875_10041567
170 Ga0207692_10007693
171 Ga0207680_10136484
172 Ga0207693_10011548
173 Ga0207663_10038475
174 Ga0207662_10163326
175 Ga0207646_10155790
176 Ga0207681_10010369
177 Ga0207700_10066024
178 Ga0207700_10119599
179 Ga0207665_10138332
180 Ga0207703_10466229
181 Ga0207708_10059447
182 Ga0207702_10311025
183 Ga0207641_10136167
184 Ga0207428_10002691
185 Ga0265313_10028163
186 Ga0316575_10107324
187 Ga0316577_10054920
188 Ga0373943_0071102
189 Ga0373933_0011726
190 Ga0373937_0022249
191 Ga0316584_0150054
192 Ga0436364_0687884
193 Ga0436364_1309894
194 Ga0436364_1390920
195 Ga0436364_1421151
196 Ga0436360_0653222
197 Ga0436360_1020142
198 Ga0436363_0685188
199 Ga0436363_0886429
200 Ga0436362_0457800
201 Ga0451577_0003354
202 Ga0451577_0052824
203 Ga0451577_0435070
204 Ga0453684_0005422
205 Ga0453684_0335436
206 Ga0466960_0028912
207 Ga0466960_0056593
208 Ga0451576_0015693
209 Ga0451576_0321275
210 Ga0495606_0061753
211 Ga0495640_0080418
212 Ga0495586_0035174
213 Ga0495597_0000116
214 Ga0495667_0045926
215 Ga0495635_0114828
216 Ga0495599_0107645
217 Ga0495600_0074414
218 Ga0495680_0123498
219 Ga0495602_0293424
220 Ga0496106_0059248
221 Ga0496122_0000924
222 Ga0496122_0010666
223 Ga0496123_0028312
224 Ga0496126_0043679
225 Ga0501075_0109400
226 Ga0501211_003078
227 Ga0501235_000238
228 Ga0501080_0439637
229 Ga0501264_006222
230 Ga0501283_009426
231 nmdc:mga09592_110194_c1
232 nmdc:mga06r32_67425_c1
233 nmdc:mga08y16_43034_c1
234 nmdc:mga08y16_525431_c1
235 nmdc:mga0n895_458498_c1
236 Ga0495601_0002257
237 Ga0495595_0039048
238 Ga0495619_0048131
239 2644089973
240 2644211100
241 2644319818
242 2644654755
243 2738804904
244 2883577610
245 2894774826
246 2916974089
247 2929200747
248 8055913964

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16884

ADH_N_2

N-terminal domain of oxidoreductase

50

157

0.98

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

202

339

0.87

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

235

374

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4b7c-assembly5.cif.gz_J crystal structure of hypothetical protein pa1648 from pseudomonas aeruginosa. 0.9705 1 332
4b7c-assembly6.cif.gz_K crystal structure of hypothetical protein pa1648 from pseudomonas aeruginosa. 0.9649 3 332
4b7c-assembly6.cif.gz_L crystal structure of hypothetical protein pa1648 from pseudomonas aeruginosa. 0.9647 1 332
4b7c-assembly5.cif.gz_J crystal structure of hypothetical protein pa1648 from pseudomonas aeruginosa. 0.9642 1 332
4b7c-assembly2.cif.gz_D crystal structure of hypothetical protein pa1648 from pseudomonas aeruginosa. 0.9631 1 332
ID Description Score Start End Superfamily
4b7xB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9573 126 301 3.40.50.720
af_Q869N3_132_238_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.957 127 231 3.90.180.10
af_Q54LY2_135_306_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9534 130 301 3.40.50.720
af_Q69XJ5_140_308_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.95 132 300 3.40.50.720
af_Q54LY2_135_306_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.948 130 301 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2K3JSH2-F1-model_v4 NADP-dependent alkenal double bond reductase p1-like protein 0.9887 127 209 GO:0032440
AF-A0A524P6P4-F1-model_v4 NADP-dependent oxidoreductase 0.9698 1 105 GO:0016628
AF-A0A2K3JSH2-F1-model_v4 NADP-dependent alkenal double bond reductase p1-like protein 0.9657 127 209 GO:0032440
AF-A0A7X3ZJU0-F1-model_v4 NADP-dependent oxidoreductase 0.961 1 226 GO:0016628
AF-A0A355V4Y6-F1-model_v4 NADP-dependent oxidoreductase 0.9565 1 91 GO:0016628

Map