F114971

General Info

Members Datasets Scaffolds Average Seq Length
122 22 244 81

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10807752|Ga0316576_108077522
Length 86
Sequence MADEATVQQVADAMFELVKDCEGKKNLKAGDLTKAMVAKFGGNVDKKFCKLAIRELMDSGRCVYSYFGGSYITLPKVEGADPSRQD

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
3 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
4 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
5 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
6 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
7 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
8 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
9 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
10 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
11 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
12 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
13 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
14 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
15 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
16 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
17 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
18 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
19 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
20 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
21 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
22 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.49
Metatranscriptomes 29.51
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.36
Stem 0
Stem Tuber 0
Unclassified 16.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10807752 3300031727 Unclassified 675
2 Ga0316575_10000305 3300031665 Bacteria 13731
3 Ga0316575_10018303 3300031665 Bacteria 2669
4 Ga0316575_10191339 3300031665 Bacteria 851
5 Ga0316575_10461121 3300031665 Bacteria 549
6 Ga0316579_10072930 3300031691 Bacteria 1628
7 Ga0316579_10103769 3300031691 Bacteria 1362
8 Ga0316579_10148057 3300031691 Unclassified 1132
9 Ga0316579_10212305 3300031691 Bacteria 936
10 Ga0316576_10000807 3300031727 Bacteria 15794
11 Ga0316576_10038132 3300031727 Bacteria 3444
12 Ga0316576_10038622 3300031727 Bacteria 3424
13 Ga0316576_10116595 3300031727 Bacteria 2004
14 Ga0316576_10206620 3300031727 Bacteria 1479
15 Ga0316576_10227515 3300031727 Bacteria 1402
16 Ga0316576_10271829 3300031727 Bacteria 1270
17 Ga0316576_10338761 3300031727 Bacteria 1120
18 Ga0316576_10449979 3300031727 Unclassified 951
19 Ga0316576_10530674 3300031727 Bacteria 864
20 Ga0316576_10751081 3300031727 Bacteria 704
21 Ga0316576_10850828 3300031727 Bacteria 655
22 Ga0316576_10961309 3300031727 Bacteria 610
23 Ga0316576_10992065 3300031727 Bacteria 599
24 Ga0316576_11232809 3300031727 Unclassified 528
25 Ga0316578_10024098 3300031728 Bacteria 3412
26 Ga0316578_10036826 3300031728 Bacteria 2817
27 Ga0316578_10048350 3300031728 Bacteria 2484
28 Ga0316578_10072595 3300031728 Bacteria 2038
29 Ga0316578_10128020 3300031728 Bacteria 1527
30 Ga0316578_10214495 3300031728 Bacteria 1157
31 Ga0316578_10238706 3300031728 Unclassified 1091
32 Ga0316578_10468731 3300031728 Bacteria 743
33 Ga0316577_10003158 3300031733 Bacteria 8282
34 Ga0316577_10010470 3300031733 Bacteria 5008
35 Ga0316577_10017306 3300031733 Bacteria 3978
36 Ga0316577_10494484 3300031733 Bacteria 695
37 Ga0316577_10507074 3300031733 Bacteria 686
38 Ga0316583_10003260 3300032133 Bacteria 5702
39 Ga0316583_10006771 3300032133 Bacteria 4128
40 Ga0316583_10006789 3300032133 Bacteria 4123
41 Ga0316583_10048960 3300032133 Bacteria 1488
42 Ga0316583_10051067 3300032133 Bacteria 1455
43 Ga0316583_10065376 3300032133 Bacteria 1273
44 Ga0316583_10141148 3300032133 Bacteria 839
45 Ga0316583_10202811 3300032133 Bacteria 688
46 Ga0316585_10109215 3300032137 Bacteria 909
47 Ga0316580_10048832 3300032139 Bacteria 1304
48 Ga0316580_10141317 3300032139 Bacteria 739
49 Ga0316580_10175621 3300032139 Bacteria 658
50 Ga0316593_10019120 3300032168 Bacteria 2114
51 Ga0316593_10082211 3300032168 Bacteria 1125
52 Ga0316593_10201501 3300032168 Bacteria 736
53 Ga0316593_10241880 3300032168 Bacteria 674
54 Ga0316593_10298154 3300032168 Unclassified 610
55 Ga0316593_10382417 3300032168 Bacteria 542
56 Ga0316592_1008703 3300033524 Bacteria 2014
57 Ga0316592_1143508 3300033524 Bacteria 561
58 Ga0316586_1010052 3300033527 Bacteria 1427
59 Ga0316586_1051280 3300033527 Bacteria 739
60 Ga0316586_1065028 3300033527 Unclassified 667
61 Ga0316586_1087101 3300033527 Bacteria 587
62 Ga0316586_1102144 3300033527 Unclassified 549
63 Ga0316588_1002631 3300033528 Bacteria 3154
64 Ga0316588_1035952 3300033528 Bacteria 1175
65 Ga0316588_1073537 3300033528 Bacteria 841
66 Ga0316588_1086444 3300033528 Unclassified 779
67 Ga0316588_1140708 3300033528 Bacteria 616
68 Ga0316588_1146904 3300033528 Bacteria 604
69 Ga0316588_1165795 3300033528 Viruses 570
70 Ga0316588_1170200 3300033528 Bacteria 563
71 Ga0316588_1182617 3300033528 Bacteria 545
72 Ga0316588_1219396 3300033528 Bacteria 500
73 Ga0316587_1001705 3300033529 Bacteria 2782
74 Ga0316587_1001708 3300033529 Bacteria 2781
75 Ga0316587_1040854 3300033529 Bacteria 838
76 Ga0316587_1108360 3300033529 Bacteria 538
77 Ga0316596_1004338 3300033541 Bacteria 3173
78 Ga0316596_1005957 3300033541 Bacteria 2812
79 Ga0316596_1048384 3300033541 Bacteria 1123
80 Ga0316596_1087883 3300033541 Bacteria 837
81 Ga0316596_1089831 3300033541 Bacteria 828
82 Ga0316596_1106806 3300033541 Unclassified 759
83 Ga0316596_1143288 3300033541 Bacteria 655
84 Ga0316596_1228470 3300033541 Bacteria 522
85 Ga0316596_1231039 3300033541 Bacteria 519
86 Ga0316574_0006471 3300035398 Bacteria 6334
87 Ga0316574_0089476 3300035398 Bacteria 1961
88 Ga0316574_0292427 3300035398 Bacteria 1037
89 Ga0316574_0361201 3300035398 Bacteria 918
90 Ga0316574_0369832 3300035398 Bacteria 905
91 Ga0316574_0509521 3300035398 Unclassified 750
92 Ga0316574_0521181 3300035398 Bacteria 740
93 Ga0316574_0606857 3300035398 Unclassified 676
94 Ga0316574_0869751 3300035398 Unclassified 546
95 Ga0316582_0029626 3300036647 Bacteria 3327
96 Ga0316582_0030491 3300036647 Bacteria 3286
97 Ga0316582_0038385 3300036647 Bacteria 2976
98 Ga0316582_0537759 3300036647 Bacteria 805
99 Ga0316582_0636299 3300036647 Unclassified 734
100 Ga0316582_0639926 3300036647 Bacteria 731
101 Ga0316582_0702183 3300036647 Bacteria 695
102 Ga0316582_1128880 3300036647 Unclassified 534
103 Ga0316584_0000167 3300036712 Bacteria 31018
104 Ga0316584_0023768 3300036712 Bacteria 4478
105 Ga0316584_0047641 3300036712 Bacteria 3202
106 Ga0316584_0048282 3300036712 Bacteria 3180
107 Ga0316584_0158971 3300036712 Bacteria 1680
108 Ga0316584_0468518 3300036712 Bacteria 889
109 Ga0316584_0629486 3300036712 Unclassified 741
110 Ga0316584_0672401 3300036712 Bacteria 712
111 Ga0316584_0861109 3300036712 Bacteria 612
112 Ga0316584_0986193 3300036712 Unclassified 563
113 Ga0316584_1164920 3300036712 Unclassified 509
114 Ga0316581_0004825 3300037588 Bacteria 3470
115 Ga0316581_0141611 3300037588 Bacteria 741
116 Ga0400490_16458 3300038726 Bacteria 1859
117 Ga0400489_46356 3300039093 Unclassified 1673
118 Ga0451577_0154480 3300042876 Bacteria 2065
119 Ga0451577_1361507 3300042876 Unclassified 630
120 Ga0453684_0001209 3300044712 Bacteria 79474
121 Ga0453684_0061334 3300044712 Bacteria 4828
122 Ga0453684_1298329 3300044712 Bacteria 759
123 Ga0316576_10807752
124 Ga0316575_10000305
125 Ga0316575_10018303
126 Ga0316575_10191339
127 Ga0316575_10461121
128 Ga0316579_10072930
129 Ga0316579_10103769
130 Ga0316579_10148057
131 Ga0316579_10212305
132 Ga0316576_10000807
133 Ga0316576_10038132
134 Ga0316576_10038622
135 Ga0316576_10116595
136 Ga0316576_10206620
137 Ga0316576_10227515
138 Ga0316576_10271829
139 Ga0316576_10338761
140 Ga0316576_10449979
141 Ga0316576_10530674
142 Ga0316576_10751081
143 Ga0316576_10850828
144 Ga0316576_10961309
145 Ga0316576_10992065
146 Ga0316576_11232809
147 Ga0316578_10024098
148 Ga0316578_10036826
149 Ga0316578_10048350
150 Ga0316578_10072595
151 Ga0316578_10128020
152 Ga0316578_10214495
153 Ga0316578_10238706
154 Ga0316578_10468731
155 Ga0316577_10003158
156 Ga0316577_10010470
157 Ga0316577_10017306
158 Ga0316577_10494484
159 Ga0316577_10507074
160 Ga0316583_10003260
161 Ga0316583_10006771
162 Ga0316583_10006789
163 Ga0316583_10048960
164 Ga0316583_10051067
165 Ga0316583_10065376
166 Ga0316583_10141148
167 Ga0316583_10202811
168 Ga0316585_10109215
169 Ga0316580_10048832
170 Ga0316580_10141317
171 Ga0316580_10175621
172 Ga0316593_10019120
173 Ga0316593_10082211
174 Ga0316593_10201501
175 Ga0316593_10241880
176 Ga0316593_10298154
177 Ga0316593_10382417
178 Ga0316592_1008703
179 Ga0316592_1143508
180 Ga0316586_1010052
181 Ga0316586_1051280
182 Ga0316586_1065028
183 Ga0316586_1087101
184 Ga0316586_1102144
185 Ga0316588_1002631
186 Ga0316588_1035952
187 Ga0316588_1073537
188 Ga0316588_1086444
189 Ga0316588_1140708
190 Ga0316588_1146904
191 Ga0316588_1165795
192 Ga0316588_1170200
193 Ga0316588_1182617
194 Ga0316588_1219396
195 Ga0316587_1001705
196 Ga0316587_1001708
197 Ga0316587_1040854
198 Ga0316587_1108360
199 Ga0316596_1004338
200 Ga0316596_1005957
201 Ga0316596_1048384
202 Ga0316596_1087883
203 Ga0316596_1089831
204 Ga0316596_1106806
205 Ga0316596_1143288
206 Ga0316596_1228470
207 Ga0316596_1231039
208 Ga0316574_0006471
209 Ga0316574_0089476
210 Ga0316574_0292427
211 Ga0316574_0361201
212 Ga0316574_0369832
213 Ga0316574_0509521
214 Ga0316574_0521181
215 Ga0316574_0606857
216 Ga0316574_0869751
217 Ga0316582_0029626
218 Ga0316582_0030491
219 Ga0316582_0038385
220 Ga0316582_0537759
221 Ga0316582_0636299
222 Ga0316582_0639926
223 Ga0316582_0702183
224 Ga0316582_1128880
225 Ga0316584_0000167
226 Ga0316584_0023768
227 Ga0316584_0047641
228 Ga0316584_0048282
229 Ga0316584_0158971
230 Ga0316584_0468518
231 Ga0316584_0629486
232 Ga0316584_0672401
233 Ga0316584_0861109
234 Ga0316584_0986193
235 Ga0316584_1164920
236 Ga0316581_0004825
237 Ga0316581_0141611
238 Ga0400490_16458
239 Ga0400489_46356
240 Ga0451577_0154480
241 Ga0451577_1361507
242 Ga0453684_0001209
243 Ga0453684_0061334
244 Ga0453684_1298329

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bdd-assembly1.cif.gz_B crystal structure of a putative multiple antibiotic-resistance repressor (ssu05_1136) from streptococcus suis 89/1591 at 2.20 a resolution 0.8369 9 75
1ldj-assembly1.cif.gz_A structure of the cul1-rbx1-skp1-f boxskp2 scf ubiquitin ligase complex 0.8364 9 74
8b9d-assembly1.cif.gz_4 human replisome bound by pol alpha 0.833 6 75
5k5q-assembly1.cif.gz_A structure of aspa-dna complex: novel centromere bindng protein-centromere complex 0.8327 9 75
4a0c-assembly2.cif.gz_C structure of the cand1-cul4b-rbx1 complex 0.8323 6 74
ID Description Score Start End Superfamily
af_Q95XQ8_742_823_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8627 6 77 1.10.10.10
af_A4I3U0_697_766_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8594 6 76 1.10.10.10
af_Q9C9L0_644_732_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8416 6 74 1.10.10.10
af_A4I3U1_634_717_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8388 2 76 1.10.10.10
1saxB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8382 10 74 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A524GEY0-F1-model_v4 Sulfite reductase 1.005 1 74
AF-A0A7C3CBR2-F1-model_v4 DsrD 1.003 4 75
AF-A0A661NZF0-F1-model_v4 Dissimilatory sulfite reductase-asociated protein DsvD 0.9986 3 77
AF-A0A509KYN1-F1-model_v4 DsrD 0.9978 4 77
AF-A0A846P6G1-F1-model_v4 Sulfite reductase 0.994 3 77

Map