F114894

General Info

Members Datasets Scaffolds Average Seq Length
122 84 244 457

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10000633|Ga0265327_100006332
Length 513
Sequence MPLPDLIEIVPLNQPLRAEITVPGSKSITNRALILAALANGEVTLKGALWSEDTQIMVECLKELGYVLNVAPDPDEPCNRTIMVIGEGATVPRGGTETEPLDLFVGNAGTAARFLVPFLCLGSGVYRLHGVPRMHERPQAALFKAVCELGYRIESENGNDKLPARIFAGMAGQSPESMTEFIQRKQVPPVPKQCRVSIAESSQFASALLLSAETGGWDIEIEGENADESPYVVMTQKLIAAFPKNGGKFQIEPDASSGSYFWAAGVITDSMESNLPYLPEGKSNISGNWIKIGKSIEVNNWPTTGWQIDEDFKVFSIAGPLFHDFQKLREKLREPGKPDDDEAMQQVREEIMGSSNGEVSRRSDLGDSIMTAIAIAPLTDWAGRNGFIKFTDLGRLRVQECERVVALRTELTKCGAKVVEEGDTLTVYPSKLAELHGAEIETYNDHRMAMCFAILGLKVPGIRIKNPTCVKKTFPNFFQKLAAAPPHGLGVEIWEIKNGQRTRQLSGDDLFAA

Samples

Sample ID Description Type Environment
1 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
38 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
39 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
40 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
41 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
44 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
45 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
46 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
47 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
48 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
49 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
50 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
51 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
52 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
53 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
54 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
55 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
56 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
57 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
58 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
59 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
60 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
65 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
66 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
67 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
70 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
71 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
72 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
73 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
74 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
75 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
76 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
79 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 6.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265327_10000633 3300031251 Bacteria 57331
2 Ga0070658_10000444 3300005327 Bacteria 35760
3 Ga0070690_100047435 3300005330 Bacteria 2733
4 Ga0070680_100040159 3300005336 Bacteria 3788
5 Ga0070689_100072774 3300005340 Bacteria 2686
6 Ga0070688_100126666 3300005365 Bacteria 1717
7 Ga0070701_10006831 3300005438 Bacteria 4829
8 Ga0070711_100002063 3300005439 Bacteria 11336
9 Ga0070700_100042580 3300005441 Bacteria 2789
10 Ga0070694_100037847 3300005444 Bacteria 3202
11 Ga0070708_100040664 3300005445 Unclassified 4072
12 Ga0070681_10227894 3300005458 Unclassified 1778
13 Ga0070679_100017086 3300005530 Bacteria 7013
14 Ga0070704_100015197 3300005549 Bacteria 4830
15 Ga0068855_100072103 3300005563 Bacteria 4015
16 Ga0068857_100007069 3300005577 Bacteria 9669
17 Ga0068856_100000155 3300005614 Bacteria 70571
18 Ga0068863_100136349 3300005841 Bacteria 2345
19 Ga0070715_10026263 3300006163 Bacteria 2315
20 Ga0105240_10001015 3300009093 Bacteria 50036
21 Ga0105237_10000066 3300009545 Bacteria 139379
22 Ga0105238_10009564 3300009551 Bacteria 9697
23 Ga0105238_10041485 3300009551 Bacteria 4660
24 Ga0105238_10221460 3300009551 Bacteria 1868
25 Ga0105239_10014259 3300010375 Bacteria 8823
26 Ga0157375_10000072 3300013308 Bacteria 106823
27 Ga0163163_10000064 3300014325 Bacteria 117551
28 Ga0207695_10006456 3300025913 Bacteria 15223
29 Ga0207671_10000048 3300025914 Bacteria 194704
30 Ga0207693_10105808 3300025915 Unclassified 2206
31 Ga0207663_10006768 3300025916 Bacteria 5899
32 Ga0207660_10038958 3300025917 Bacteria 3321
33 Ga0207652_10001325 3300025921 Bacteria 21970
34 Ga0207652_10016516 3300025921 Bacteria 6028
35 Ga0207694_10124422 3300025924 Unclassified 2061
36 Ga0207670_10017350 3300025936 Bacteria 4350
37 Ga0207670_10124235 3300025936 Bacteria 1881
38 Ga0207667_10047392 3300025949 Bacteria 4549
39 Ga0207702_10000647 3300026078 Bacteria 37987
40 Ga0207674_10021181 3300026116 Bacteria 7008
41 Ga0265319_1016797 3300028563 Bacteria 2800
42 Ga0265323_10000659 3300028653 Bacteria 18837
43 Ga0265336_10000669 3300028666 Bacteria 18571
44 Ga0265338_10000214 3300028800 Bacteria 106870
45 Ga0265338_10000459 3300028800 Bacteria 72730
46 Ga0265338_10001807 3300028800 Bacteria 33620
47 Ga0265338_10002612 3300028800 Bacteria 26603
48 Ga0265338_10004147 3300028800 Bacteria 19801
49 Ga0265338_10006285 3300028800 Bacteria 15185
50 Ga0265338_10012462 3300028800 Bacteria 9692
51 Ga0265338_10012612 3300028800 Bacteria 9624
52 Ga0265338_10024578 3300028800 Bacteria 6150
53 Ga0265338_10059263 3300028800 Bacteria 3373
54 Ga0265324_10001481 3300029957 Bacteria 13328
55 Ga0265324_10001950 3300029957 Bacteria 11056
56 Ga0265324_10006220 3300029957 Bacteria 5022
57 Ga0265324_10014305 3300029957 Bacteria 2940
58 Ga0265324_10019317 3300029957 Bacteria 2456
59 Ga0265320_10001548 3300031240 Bacteria 16624
60 Ga0265320_10020914 3300031240 Bacteria 3534
61 Ga0265320_10064948 3300031240 Bacteria 1732
62 Ga0265325_10021825 3300031241 Bacteria 3511
63 Ga0265325_10030801 3300031241 Bacteria 2875
64 Ga0265325_10055921 3300031241 Bacteria 2016
65 Ga0265340_10000438 3300031247 Bacteria 22415
66 Ga0265340_10025337 3300031247 Unclassified 3004
67 Ga0265339_10085738 3300031249 Bacteria 1658
68 Ga0265327_10005793 3300031251 Bacteria 10160
69 Ga0265316_10008279 3300031344 Bacteria 9667
70 Ga0265316_10008840 3300031344 Bacteria 9303
71 Ga0265316_10065038 3300031344 Bacteria 2824
72 Ga0265316_10140589 3300031344 Bacteria 1814
73 Ga0265316_10173776 3300031344 Bacteria 1606
74 Ga0265313_10016404 3300031595 Bacteria 4258
75 Ga0265314_10002166 3300031711 Bacteria 20548
76 Ga0265314_10023975 3300031711 Bacteria 4637
77 Ga0265314_10042937 3300031711 Bacteria 3220
78 Ga0265342_10034887 3300031712 Bacteria 3083
79 Ga0265342_10076315 3300031712 Bacteria 1943
80 Ga0265342_10114658 3300031712 Bacteria 1522
81 Ga0373930_0001069 3300034816 Bacteria 3953
82 Ga0373928_0000042 3300035084 Bacteria 21413
83 Ga0373929_0000554 3300035085 Bacteria 7187
84 Ga0373944_0000093 3300035089 Bacteria 15813
85 Ga0373932_0000008 3300035112 Bacteria 167879
86 Ga0373945_0007793 3300035116 Bacteria 3475
87 Ga0373962_0000072 3300035242 Bacteria 22148
88 Ga0373931_0000011 3300035691 Bacteria 304643
89 Ga0373935_0014407 3300035692 Bacteria 4772
90 Ga0373927_0005558 3300035695 Bacteria 8670
91 Ga0373927_0012322 3300035695 Bacteria 5690
92 Ga0373927_0044792 3300035695 Bacteria 2862
93 Ga0373925_0000521 3300037068 Bacteria 38336
94 Ga0373925_0000831 3300037068 Bacteria 28499
95 Ga0453684_0003567 3300044712 Bacteria 34779
96 Ga0453684_0294335 3300044712 Bacteria 1847
97 Ga0451576_0194778 3300045051 Bacteria 2117
98 Ga0495592_0000059 3300046454 Bacteria 100782
99 Ga0495641_0050951 3300046461 Bacteria 1891
100 Ga0495664_0023171 3300046477 Bacteria 3602
101 Ga0495618_0007480 3300046514 Bacteria 6608
102 Ga0495628_0000266 3300046516 Bacteria 46653
103 Ga0495630_0005917 3300046517 Bacteria 8648
104 Ga0495630_0034577 3300046517 Bacteria 3774
105 Ga0495666_0011077 3300046526 Bacteria 4500
106 Ga0495652_0079731 3300046529 Unclassified 2706
107 Ga0495586_0000656 3300046535 Bacteria 19850
108 Ga0495586_0002718 3300046535 Bacteria 9575
109 Ga0495587_0064829 3300046536 Bacteria 2134
110 Ga0495645_0005390 3300046543 Bacteria 8773
111 Ga0495599_0004987 3300046678 Bacteria 7896
112 Ga0495647_0019365 3300046681 Unclassified 2433
113 Ga0495658_0049902 3300046683 Bacteria 2365
114 Ga0495613_0039113 3300046689 Unclassified 3516
115 Ga0495674_0020066 3300047319 Bacteria 6194
116 Ga0495674_0028733 3300047319 Bacteria 5066
117 Ga0501034_0145309 3300049571 Bacteria 2349
118 Ga0501036_0277501 3300049572 Bacteria 1403
119 Ga0501047_0091873 3300049581 Bacteria 2914
120 Ga0501035_0015769 3300049822 Bacteria 6975
121 Ga0501044_0015325 3300049823 Bacteria 8256
122 nmdc:mga08y16_128894_c1 3300050511 Bacteria 2631
123 Ga0265327_10000633
124 Ga0070658_10000444
125 Ga0070690_100047435
126 Ga0070680_100040159
127 Ga0070689_100072774
128 Ga0070688_100126666
129 Ga0070701_10006831
130 Ga0070711_100002063
131 Ga0070700_100042580
132 Ga0070694_100037847
133 Ga0070708_100040664
134 Ga0070681_10227894
135 Ga0070679_100017086
136 Ga0070704_100015197
137 Ga0068855_100072103
138 Ga0068857_100007069
139 Ga0068856_100000155
140 Ga0068863_100136349
141 Ga0070715_10026263
142 Ga0105240_10001015
143 Ga0105237_10000066
144 Ga0105238_10009564
145 Ga0105238_10041485
146 Ga0105238_10221460
147 Ga0105239_10014259
148 Ga0157375_10000072
149 Ga0163163_10000064
150 Ga0207695_10006456
151 Ga0207671_10000048
152 Ga0207693_10105808
153 Ga0207663_10006768
154 Ga0207660_10038958
155 Ga0207652_10001325
156 Ga0207652_10016516
157 Ga0207694_10124422
158 Ga0207670_10017350
159 Ga0207670_10124235
160 Ga0207667_10047392
161 Ga0207702_10000647
162 Ga0207674_10021181
163 Ga0265319_1016797
164 Ga0265323_10000659
165 Ga0265336_10000669
166 Ga0265338_10000214
167 Ga0265338_10000459
168 Ga0265338_10001807
169 Ga0265338_10002612
170 Ga0265338_10004147
171 Ga0265338_10006285
172 Ga0265338_10012462
173 Ga0265338_10012612
174 Ga0265338_10024578
175 Ga0265338_10059263
176 Ga0265324_10001481
177 Ga0265324_10001950
178 Ga0265324_10006220
179 Ga0265324_10014305
180 Ga0265324_10019317
181 Ga0265320_10001548
182 Ga0265320_10020914
183 Ga0265320_10064948
184 Ga0265325_10021825
185 Ga0265325_10030801
186 Ga0265325_10055921
187 Ga0265340_10000438
188 Ga0265340_10025337
189 Ga0265339_10085738
190 Ga0265327_10005793
191 Ga0265316_10008279
192 Ga0265316_10008840
193 Ga0265316_10065038
194 Ga0265316_10140589
195 Ga0265316_10173776
196 Ga0265313_10016404
197 Ga0265314_10002166
198 Ga0265314_10023975
199 Ga0265314_10042937
200 Ga0265342_10034887
201 Ga0265342_10076315
202 Ga0265342_10114658
203 Ga0373930_0001069
204 Ga0373928_0000042
205 Ga0373929_0000554
206 Ga0373944_0000093
207 Ga0373932_0000008
208 Ga0373945_0007793
209 Ga0373962_0000072
210 Ga0373931_0000011
211 Ga0373935_0014407
212 Ga0373927_0005558
213 Ga0373927_0012322
214 Ga0373927_0044792
215 Ga0373925_0000521
216 Ga0373925_0000831
217 Ga0453684_0003567
218 Ga0453684_0294335
219 Ga0451576_0194778
220 Ga0495592_0000059
221 Ga0495641_0050951
222 Ga0495664_0023171
223 Ga0495618_0007480
224 Ga0495628_0000266
225 Ga0495630_0005917
226 Ga0495630_0034577
227 Ga0495666_0011077
228 Ga0495652_0079731
229 Ga0495586_0000656
230 Ga0495586_0002718
231 Ga0495587_0064829
232 Ga0495645_0005390
233 Ga0495599_0004987
234 Ga0495647_0019365
235 Ga0495658_0049902
236 Ga0495613_0039113
237 Ga0495674_0020066
238 Ga0495674_0028733
239 Ga0501034_0145309
240 Ga0501036_0277501
241 Ga0501047_0091873
242 Ga0501035_0015769
243 Ga0501044_0015325
244 nmdc:mga08y16_128894_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00275

EPSP_synthase

EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)

11

245

0.86

PF00275

EPSP_synthase

EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)

320

481

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7tm4-assembly1.cif.gz_A crystal structure of apo 3-phosphoshikimate 1-carboxyvinyltransferase from klebsiella pneumoniae 0.8717 1 379
7tm4-assembly1.cif.gz_A crystal structure of apo 3-phosphoshikimate 1-carboxyvinyltransferase from klebsiella pneumoniae 0.844 1 379
1p89-assembly1.cif.gz_A substrate-induced structural changes to the isolated n-terminal domain of 5-enolpyruvylshikimate-3-phosphate synthase 0.8379 9 211
3ti2-assembly2.cif.gz_B 1.90 angstrom resolution crystal structure of n-terminal domain 3-phosphoshikimate 1-carboxyvinyltransferase from vibrio cholerae 0.8307 1 210
2qfu-assembly1.cif.gz_A e.coli epsp synthase pro101leu liganded with s3p and glyphosate 0.8076 1 379
ID Description Score Start End Superfamily
1g6sA01 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.8668 213 379 3.65.10.10
af_Q57925_21_220_3.65.10.10 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.8654 4 201 3.65.10.10
af_Q57925_221_429_3.65.10.10 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.8627 208 379 3.65.10.10
af_Q05615_22_211_3.65.10.10 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.8381 4 201 3.65.10.10
2bjbA02 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.8347 6 200 3.65.10.10
ID Description Score Start End GO Terms
AF-A0A2V5N0D7-F1-model_v4 Enolpyruvate transferase domain-containing protein 0.9727 36 168 GO:0003866
GO:0009423
AF-A0A645J1R0-F1-model_v4 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.9689 258 379 GO:0003866
GO:0009423
AF-A0A832FWT5-F1-model_v4 Enolpyruvate transferase domain-containing protein 0.9681 21 168 GO:0003866
GO:0009423
AF-A0A3D4F8D9-F1-model_v4 3-phosphoshikimate 1-carboxyvinyltransferase 0.9656 1 148 GO:0003866
GO:0009423
AF-A0A7S0H6W2-F1-model_v4 Enolpyruvate transferase domain-containing protein 0.9629 1 221 GO:0003866
GO:0009423

Map