F113038

General Info

Members Datasets Scaffolds Average Seq Length
122 59 122 352

Family's Representative Sequence

Representative Sequence 3300005341|Ga0070691_10034139|Ga0070691_100341392
Length 357
Sequence MAHVDYERELNELIEIVVAERGSDLHFAVGAHPTIRVAGALIPLLKKPILNQEDALGFLTALLKNEEKTQNFLLKKEVDFSYAYKEGVRFRGNGFFQRGGISIALRHIPQTIPSIKDLGLPPILETFAQRPQGFFLAVGPVGQGKSTTLAAIIDLINSTRAEHIVTIEDPIEYIFEPKKSLIEQREVYIDTEDFHTALQSVFRQDVDVIMVGEMRGPETISTAVTAAETGHLVLSTLHTNNAAQTIDRIIDTFPAGQQDQIRVQLAGSLAGIFSQRLIPRISGGLVPAYELLLNTNAVANLIRERRTHEINTVIETGSEHGMVEMNRSLVELVHRGEITVENAFSYSTNPKGLDRLI

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
4 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
12 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
21 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
22 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
23 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
24 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
25 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
26 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
27 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
28 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
29 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
30 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
31 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
32 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
33 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
34 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
35 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
36 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
37 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
38 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
39 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
40 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
41 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
42 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
43 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
44 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
45 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
46 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
47 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
48 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
49 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
50 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
51 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
52 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
53 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
54 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
55 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
56 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
57 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
58 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
59 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.64
Nodule 0
Rhizoplane 0
Rhizosphere 98.36
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10015970 3300005327 Bacteria 6006
2 Ga0070680_100028555 3300005336 Bacteria 4475
3 Ga0070680_100063800 3300005336 Bacteria 3018
4 Ga0070691_10034139 3300005341 Bacteria 2394
5 Ga0070701_10019111 3300005438 Bacteria 3233
6 Ga0070711_100000016 3300005439 Bacteria 153972
7 Ga0070681_10000595 3300005458 Bacteria 29738
8 Ga0070681_10001686 3300005458 Bacteria 19759
9 Ga0070681_10055232 3300005458 Bacteria 3955
10 Ga0070679_100001925 3300005530 Bacteria 18646
11 Ga0070679_100015231 3300005530 Bacteria 7386
12 Ga0070679_100056031 3300005530 Bacteria 3927
13 Ga0070679_100067309 3300005530 Bacteria 3572
14 Ga0070679_100101671 3300005530 Bacteria 2861
15 Ga0070704_100000002 3300005549 Bacteria 162543
16 Ga0068855_100016380 3300005563 Bacteria 8911
17 Ga0068855_100113398 3300005563 Bacteria 3110
18 Ga0068860_100000012 3300005843 Bacteria 326398
19 Ga0105238_10000926 3300009551 Bacteria 30036
20 Ga0207705_10018419 3300025909 Bacteria 4994
21 Ga0207707_10000021 3300025912 Bacteria 199548
22 Ga0207707_10000909 3300025912 Bacteria 28839
23 Ga0207663_10000002 3300025916 Bacteria 534155
24 Ga0207660_10019890 3300025917 Bacteria 4497
25 Ga0207660_10202582 3300025917 Unclassified 1551
26 Ga0207652_10002157 3300025921 Bacteria 16890
27 Ga0207652_10029767 3300025921 Bacteria 4569
28 Ga0207652_10034150 3300025921 Bacteria 4285
29 Ga0207652_10037951 3300025921 Bacteria 4080
30 Ga0207652_10050101 3300025921 Bacteria 3577
31 Ga0207652_10117633 3300025921 Bacteria 2362
32 Ga0207694_10001874 3300025924 Bacteria 17434
33 Ga0207644_10070153 3300025931 Bacteria 2560
34 Ga0268264_10000597 3300028381 Bacteria 43645
35 Ga0265319_1037630 3300028563 Bacteria 1648
36 Ga0265334_10047068 3300028573 Bacteria 1665
37 Ga0265318_10004901 3300028577 Bacteria 6382
38 Ga0265318_10012620 3300028577 Bacteria 3589
39 Ga0265318_10023894 3300028577 Bacteria 2431
40 Ga0265336_10000018 3300028666 Bacteria 221454
41 Ga0265336_10012610 3300028666 Unclassified 2839
42 Ga0265338_10000002 3300028800 Bacteria 856588
43 Ga0265338_10000405 3300028800 Bacteria 77392
44 Ga0265338_10001307 3300028800 Bacteria 40817
45 Ga0265338_10005009 3300028800 Bacteria 17512
46 Ga0265338_10008053 3300028800 Bacteria 12889
47 Ga0265338_10014483 3300028800 Bacteria 8776
48 Ga0265338_10014717 3300028800 Bacteria 8667
49 Ga0265338_10042040 3300028800 Bacteria 4264
50 Ga0265338_10056788 3300028800 Bacteria 3468
51 Ga0265338_10065706 3300028800 Bacteria 3144
52 Ga0265338_10068563 3300028800 Bacteria 3055
53 Ga0265338_10093891 3300028800 Bacteria 2470
54 Ga0265338_10209239 3300028800 Bacteria 1465
55 Ga0265324_10039871 3300029957 Bacteria 1628
56 Ga0265320_10019456 3300031240 Bacteria 3712
57 Ga0265325_10011112 3300031241 Bacteria 5183
58 Ga0265325_10109469 3300031241 Bacteria 1344
59 Ga0265329_10015424 3300031242 Unclassified 2669
60 Ga0265340_10004547 3300031247 Bacteria 7733
61 Ga0265339_10098718 3300031249 Bacteria 1523
62 Ga0265331_10000384 3300031250 Bacteria 45999
63 Ga0265327_10000312 3300031251 Bacteria 93831
64 Ga0265327_10000805 3300031251 Bacteria 47756
65 Ga0265327_10017628 3300031251 Bacteria 4467
66 Ga0265327_10025752 3300031251 Bacteria 3423
67 Ga0265327_10073525 3300031251 Bacteria 1705
68 Ga0265316_10001261 3300031344 Bacteria 27179
69 Ga0265316_10007529 3300031344 Bacteria 10247
70 Ga0265316_10026255 3300031344 Bacteria 4849
71 Ga0265316_10073390 3300031344 Bacteria 2636
72 Ga0265313_10001278 3300031595 Bacteria 23841
73 Ga0265313_10004768 3300031595 Bacteria 10226
74 Ga0265313_10014312 3300031595 Bacteria 4696
75 Ga0265314_10001679 3300031711 Bacteria 24094
76 Ga0265314_10011150 3300031711 Bacteria 7448
77 Ga0265314_10053329 3300031711 Bacteria 2805
78 Ga0265314_10058064 3300031711 Bacteria 2653
79 Ga0265342_10003711 3300031712 Bacteria 12378
80 Ga0265342_10010213 3300031712 Bacteria 6537
81 Ga0451577_0000039 3300042876 Bacteria 346861
82 Ga0453684_0000112 3300044712 Bacteria 359823
83 Ga0453684_0004387 3300044712 Bacteria 29866
84 Ga0453684_0035782 3300044712 Bacteria 6857
85 Ga0451576_0000314 3300045051 Bacteria 117351
86 Ga0451576_0000376 3300045051 Bacteria 105366
87 Ga0451576_0010516 3300045051 Bacteria 10608
88 Ga0451576_0012583 3300045051 Bacteria 9499
89 Ga0451576_0136289 3300045051 Bacteria 2560
90 Ga0451576_0166715 3300045051 Bacteria 2299
91 Ga0451576_0205085 3300045051 Bacteria 2059
92 Ga0501032_0001037 3300049569 Bacteria 22304
93 Ga0501033_0045774 3300049570 Bacteria 3255
94 Ga0501034_0000060 3300049571 Bacteria 197090
95 Ga0501034_0001230 3300049571 Bacteria 34877
96 Ga0501034_0053002 3300049571 Bacteria 4087
97 Ga0501034_0097805 3300049571 Bacteria 2931
98 Ga0501034_0107148 3300049571 Bacteria 2787
99 Ga0501034_0124021 3300049571 Unclassified 2569
100 Ga0501034_0212739 3300049571 Bacteria 1888
101 Ga0501037_0000455 3300049573 Bacteria 33407
102 Ga0501038_0014013 3300049574 Bacteria 7308
103 Ga0501039_0044724 3300049575 Bacteria 3420
104 Ga0501040_0002969 3300049576 Bacteria 10979
105 Ga0501043_0000001 3300049579 Bacteria 479879
106 Ga0501046_0003558 3300049580 Bacteria 14274
107 Ga0501047_0022315 3300049581 Bacteria 6080
108 Ga0501047_0051400 3300049581 Bacteria 3982
109 Ga0501047_0102581 3300049581 Bacteria 2740
110 Ga0501047_0390438 3300049581 Bacteria 1225
111 Ga0501070_0017724 3300049586 Bacteria 5979
112 Ga0501073_0016083 3300049589 Bacteria 5424
113 Ga0501074_0001120 3300049590 Bacteria 17522
114 Ga0501249_000657 3300049679 Bacteria 7903
115 Ga0501080_0004963 3300049742 Bacteria 11847
116 Ga0501080_0072816 3300049742 Bacteria 3197
117 Ga0501035_0050286 3300049822 Bacteria 3735
118 Ga0501035_0237995 3300049822 Bacteria 1549
119 Ga0500556_0001770 3300053104 Bacteria 8080
120 Ga0500616_0000055 3300053153 Bacteria 289080
121 Ga0501084_0037013 3300054114 Bacteria 4077
122 Ga0501082_0000001 3300060353 Bacteria 209420

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0124021 Ga0501034_0124021_669_1610 312
2 3300028800 Ga0265338_10068563 Ga0265338_100685632 327
3 3300005336 Ga0070680_100028555 Ga0070680_1000285555 341
4 3300005458 Ga0070681_10055232 Ga0070681_100552323 341
5 3300005530 Ga0070679_100001925 Ga0070679_1000019251 341
6 3300005843 Ga0068860_100000012 Ga0068860_100000012207 341
7 3300025917 Ga0207660_10019890 Ga0207660_100198902 341
8 3300025921 Ga0207652_10002157 Ga0207652_1000215723 341
9 3300028381 Ga0268264_10000597 Ga0268264_100005978 341
10 3300028563 Ga0265319_1037630 Ga0265319_10376302 341
11 3300028666 Ga0265336_10000018 Ga0265336_10000018121 341
12 3300028800 Ga0265338_10000002 Ga0265338_10000002312 341
13 3300028800 Ga0265338_10000405 Ga0265338_1000040542 341
14 3300028800 Ga0265338_10001307 Ga0265338_1000130727 341
15 3300028800 Ga0265338_10005009 Ga0265338_1000500913 341
16 3300028800 Ga0265338_10042040 Ga0265338_100420403 341
17 3300028800 Ga0265338_10065706 Ga0265338_100657062 341
18 3300028800 Ga0265338_10093891 Ga0265338_100938912 341
19 3300029957 Ga0265324_10039871 Ga0265324_100398712 341
20 3300031240 Ga0265320_10019456 Ga0265320_100194562 341
21 3300031249 Ga0265339_10098718 Ga0265339_100987182 341
22 3300031250 Ga0265331_10000384 Ga0265331_1000038417 341
23 3300031251 Ga0265327_10000805 Ga0265327_1000080541 341
24 3300031344 Ga0265316_10001261 Ga0265316_1000126121 341
25 3300031344 Ga0265316_10007529 Ga0265316_100075291 341
26 3300031344 Ga0265316_10073390 Ga0265316_100733903 341
27 3300031711 Ga0265314_10053329 Ga0265314_100533293 341
28 3300031711 Ga0265314_10058064 Ga0265314_100580643 341
29 3300044712 Ga0453684_0004387 Ga0453684_0004387_14574_15632 341
30 3300045051 Ga0451576_0000314 Ga0451576_0000314_21085_22143 341
31 3300045051 Ga0451576_0166715 Ga0451576_0166715_79_1128 341
32 3300049742 Ga0501080_0072816 Ga0501080_0072816_155_1213 341
33 3300053153 Ga0500616_0000055 Ga0500616_0000055_218945_220006 341
34 3300005336 Ga0070680_100063800 Ga0070680_1000638002 342
35 3300005341 Ga0070691_10034139 Ga0070691_100341392 342
36 3300005438 Ga0070701_10019111 Ga0070701_100191112 342
37 3300005439 Ga0070711_100000016 Ga0070711_10000001627 342
38 3300005458 Ga0070681_10000595 Ga0070681_1000059534 342
39 3300005458 Ga0070681_10001686 Ga0070681_1000168611 342
40 3300005530 Ga0070679_100015231 Ga0070679_1000152318 342
41 3300005530 Ga0070679_100056031 Ga0070679_1000560312 342
42 3300005530 Ga0070679_100067309 Ga0070679_1000673092 342
43 3300005530 Ga0070679_100101671 Ga0070679_1001016713 342
44 3300005549 Ga0070704_100000002 Ga0070704_100000002122 342
45 3300005563 Ga0068855_100016380 Ga0068855_1000163803 342
46 3300005563 Ga0068855_100113398 Ga0068855_1001133982 342
47 3300009551 Ga0105238_10000926 Ga0105238_100009267 342
48 3300025912 Ga0207707_10000021 Ga0207707_1000002196 342
49 3300025912 Ga0207707_10000909 Ga0207707_100009092 342
50 3300025916 Ga0207663_10000002 Ga0207663_10000002489 342
51 3300025917 Ga0207660_10202582 Ga0207660_102025821 342
52 3300025921 Ga0207652_10029767 Ga0207652_100297673 342
53 3300025921 Ga0207652_10034150 Ga0207652_100341502 342
54 3300025921 Ga0207652_10037951 Ga0207652_100379512 342
55 3300025921 Ga0207652_10050101 Ga0207652_100501012 342
56 3300025921 Ga0207652_10117633 Ga0207652_101176333 342
57 3300025924 Ga0207694_10001874 Ga0207694_1000187411 342
58 3300025931 Ga0207644_10070153 Ga0207644_100701532 342
59 3300028573 Ga0265334_10047068 Ga0265334_100470683 342
60 3300028577 Ga0265318_10004901 Ga0265318_100049018 342
61 3300028577 Ga0265318_10012620 Ga0265318_100126203 342
62 3300028577 Ga0265318_10023894 Ga0265318_100238942 342
63 3300028666 Ga0265336_10012610 Ga0265336_100126102 342
64 3300028800 Ga0265338_10008053 Ga0265338_1000805310 342
65 3300028800 Ga0265338_10014483 Ga0265338_100144837 342
66 3300028800 Ga0265338_10014717 Ga0265338_100147178 342
67 3300028800 Ga0265338_10056788 Ga0265338_100567882 342
68 3300028800 Ga0265338_10209239 Ga0265338_102092391 342
69 3300031241 Ga0265325_10011112 Ga0265325_100111122 342
70 3300031241 Ga0265325_10109469 Ga0265325_101094691 342
71 3300031242 Ga0265329_10015424 Ga0265329_100154242 342
72 3300031247 Ga0265340_10004547 Ga0265340_100045477 342
73 3300031251 Ga0265327_10000312 Ga0265327_1000031223 342
74 3300031251 Ga0265327_10017628 Ga0265327_100176283 342
75 3300031251 Ga0265327_10025752 Ga0265327_100257522 342
76 3300031251 Ga0265327_10073525 Ga0265327_100735252 342
77 3300031344 Ga0265316_10026255 Ga0265316_100262552 342
78 3300031595 Ga0265313_10001278 Ga0265313_100012789 342
79 3300031595 Ga0265313_10004768 Ga0265313_100047686 342
80 3300031595 Ga0265313_10014312 Ga0265313_100143125 342
81 3300031711 Ga0265314_10001679 Ga0265314_1000167911 342
82 3300031711 Ga0265314_10011150 Ga0265314_100111508 342
83 3300031712 Ga0265342_10003711 Ga0265342_100037116 342
84 3300031712 Ga0265342_10010213 Ga0265342_100102135 342
85 3300042876 Ga0451577_0000039 Ga0451577_0000039_169613_170671 342
86 3300044712 Ga0453684_0000112 Ga0453684_0000112_185297_186355 342
87 3300044712 Ga0453684_0035782 Ga0453684_0035782_2506_3564 342
88 3300045051 Ga0451576_0000376 Ga0451576_0000376_44834_45895 342
89 3300045051 Ga0451576_0010516 Ga0451576_0010516_5159_6217 342
90 3300045051 Ga0451576_0012583 Ga0451576_0012583_5210_6268 342
91 3300045051 Ga0451576_0136289 Ga0451576_0136289_701_1762 342
92 3300045051 Ga0451576_0205085 Ga0451576_0205085_12_1067 342
93 3300049569 Ga0501032_0001037 Ga0501032_0001037_11010_12071 342
94 3300049570 Ga0501033_0045774 Ga0501033_0045774_993_2051 342
95 3300049571 Ga0501034_0000060 Ga0501034_0000060_178530_179600 342
96 3300049571 Ga0501034_0001230 Ga0501034_0001230_17770_18840 342
97 3300049571 Ga0501034_0053002 Ga0501034_0053002_395_1465 342
98 3300049571 Ga0501034_0097805 Ga0501034_0097805_105_1169 342
99 3300049571 Ga0501034_0107148 Ga0501034_0107148_1028_2092 342
100 3300049571 Ga0501034_0212739 Ga0501034_0212739_99_1160 342
101 3300049573 Ga0501037_0000455 Ga0501037_0000455_20626_21687 342
102 3300049574 Ga0501038_0014013 Ga0501038_0014013_4048_5109 342
103 3300049575 Ga0501039_0044724 Ga0501039_0044724_1949_3010 342
104 3300049576 Ga0501040_0002969 Ga0501040_0002969_105_1166 342
105 3300049579 Ga0501043_0000001 Ga0501043_0000001_13991_15052 342
106 3300049580 Ga0501046_0003558 Ga0501046_0003558_5424_6485 342
107 3300049581 Ga0501047_0022315 Ga0501047_0022315_4435_5493 342
108 3300049581 Ga0501047_0051400 Ga0501047_0051400_704_1762 342
109 3300049581 Ga0501047_0102581 Ga0501047_0102581_1018_2082 342
110 3300049581 Ga0501047_0390438 Ga0501047_0390438_20_1081 342
111 3300049586 Ga0501070_0017724 Ga0501070_0017724_4375_5433 342
112 3300049589 Ga0501073_0016083 Ga0501073_0016083_2471_3535 342
113 3300049590 Ga0501074_0001120 Ga0501074_0001120_12164_13222 342
114 3300049679 Ga0501249_000657 Ga0501249_000657_4590_5651 342
115 3300049742 Ga0501080_0004963 Ga0501080_0004963_7854_8912 342
116 3300049822 Ga0501035_0050286 Ga0501035_0050286_22_1083 342
117 3300049822 Ga0501035_0237995 Ga0501035_0237995_469_1530 342
118 3300053104 Ga0500556_0001770 Ga0500556_0001770_3926_4996 342
119 3300054114 Ga0501084_0037013 Ga0501084_0037013_1113_2177 342
120 3300060353 Ga0501082_0000001 Ga0501082_0000001_201142_202206 342
121 3300005327 Ga0070658_10015970 Ga0070658_100159706 343
122 3300025909 Ga0207705_10018419 Ga0207705_100184192 343

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00437

T2SSE

Type II/IV secretion system protein

13

281

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
2eyu-assembly2.cif.gz_B the crystal structure of the c-terminal domain of aquifex aeolicus pilt 0.9353 99 342
5zfq-assembly1.cif.gz_A crystal structure of pilt-4, a retraction atpase motor of type iv pilus , from geobacter sulfurreducens 0.9279 3 342
2ewv-assembly1.cif.gz_A crystal structure of the pilus retraction motor pilt and bound adp 0.9253 2 341
2eyu-assembly2.cif.gz_B the crystal structure of the c-terminal domain of aquifex aeolicus pilt 0.9209 99 342
5zfq-assembly1.cif.gz_A crystal structure of pilt-4, a retraction atpase motor of type iv pilus , from geobacter sulfurreducens 0.9176 3 342
ID Description Score Start End Superfamily
3jvvC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9663 97 336 3.40.50.300
3jvvC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9544 97 336 3.40.50.300
3jvvA01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9292 2 96 3.30.450.90
5fl3A01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9115 3 95 3.30.450.90
2ewwA01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9088 2 93 3.30.450.90
ID Description Score Start End GO Terms
AF-A0A2X1N7N9-F1-model_v4 Twitching motility family protein 0.9905 195 324 GO:0016887
AF-A0A535ZB85-F1-model_v4 Type IV pili twitching motility protein PilT 0.989 125 339 GO:0005524
GO:0016887
AF-A0A3C0R2S6-F1-model_v4 Type IV pili twitching motility protein PilT 0.9889 106 231 GO:0016887
AF-A0A2A4TJ50-F1-model_v4 Type IV pili twitching motility protein PilT 0.9856 99 342 GO:0005524
GO:0016887
AF-A0A3C0QEC0-F1-model_v4 Type IV pili twitching motility protein PilT 0.9852 96 341 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
93.71 0.87 High
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Predicted Structure (AlphaFold2)

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