F112098

General Info

Members Datasets Scaffolds Average Seq Length
121 90 242 146

Family's Representative Sequence

Representative Sequence 3300060353|Ga0501082_0630999|Ga0501082_0630999_260_754
Length 164
Sequence MTTTVAMNKPVAWGVQAGMPLIGQYEPSPAKWVRDQVEAYERSGGTEATTLRDTGLPVVVVTSVGARSGKLRKTPLMRVEHDGRYALVASQGGAPKHPTWYHNLVAHPGIELQDGPRRQDMTVRLLTGDERRLWWERSVAAFPSYADYERRTEREIPVFLAEPV

Samples

Sample ID Description Type Environment
1 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
2 2044078001 Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
16 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
19 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
20 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
21 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
22 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
23 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
25 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
33 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
34 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
35 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
36 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
37 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
38 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
39 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
40 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
41 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
42 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
43 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
44 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
45 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
46 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
47 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
48 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
49 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
50 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
51 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
52 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
53 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
54 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
55 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
56 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
57 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
58 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
59 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
60 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
61 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
62 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
63 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
64 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
65 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
66 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
70 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
71 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
72 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
73 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
74 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
76 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
77 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
78 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
79 2738541305 Nocardioides sp. CF167 Isolate Unclassified
80 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
81 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
82 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
83 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
84 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
85 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
86 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
87 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
88 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
89 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
90 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.3
Metatranscriptomes 5.79
Isolates 9.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.83
Nodule 0
Rhizoplane 2.48
Rhizosphere 76.86
Stem 0
Stem Tuber 0
Unclassified 3.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501082_0630999 3300060353 Bacteria 938
2 ZMR_F548DK201AS8MN 2044078001 Bacteria 535
3 Ga0006562J51391_1017412 3300003578 Bacteria 1830
4 Ga0070658_10293770 3300005327 Bacteria 1385
5 Ga0070683_100086146 3300005329 Bacteria 2946
6 Ga0070680_100120364 3300005336 Bacteria 2191
7 Ga0070714_100024624 3300005435 Bacteria 4959
8 Ga0070681_10070074 3300005458 Bacteria 3472
9 Ga0070699_100459878 3300005518 Bacteria 1154
10 Ga0070699_100575628 3300005518 Bacteria 1026
11 Ga0070699_101353421 3300005518 Bacteria 653
12 Ga0070684_100625026 3300005535 Bacteria 1002
13 Ga0068855_100097201 3300005563 Bacteria 3392
14 Ga0068855_101021068 3300005563 Bacteria 868
15 Ga0068857_101017264 3300005577 Bacteria 798
16 Ga0068859_100772103 3300005617 Bacteria 1049
17 Ga0070717_10151712 3300006028 Bacteria 2005
18 Ga0070717_10505213 3300006028 Bacteria 1093
19 Ga0075429_100300927 3300006880 Bacteria 1404
20 Ga0097620_100772194 3300006931 Bacteria 1049
21 Ga0114129_10624097 3300009147 Unclassified 1394
22 Ga0105242_11311737 3300009176 Bacteria 748
23 Ga0105246_10204009 3300011119 Bacteria 1539
24 Ga0157369_10057970 3300013105 Bacteria 4178
25 Ga0197907_10040846 3300020069 Bacteria 1300
26 Ga0197907_10727374 3300020069 Bacteria 788
27 Ga0206349_1079084 3300020075 Bacteria 867
28 Ga0206353_10226169 3300020082 Bacteria 924
29 Ga0206353_10840609 3300020082 Bacteria 1536
30 Ga0213875_10002958 3300021388 Bacteria 9902
31 Ga0213875_10013802 3300021388 Bacteria 3956
32 Ga0213875_10173110 3300021388 Bacteria 1014
33 Ga0213875_10294876 3300021388 Unclassified 767
34 Ga0224712_10051632 3300022467 Bacteria 1602
35 Ga0207647_10548773 3300025904 Bacteria 641
36 Ga0207664_10033727 3300025929 Bacteria 3936
37 Ga0207665_10314774 3300025939 Bacteria 1173
38 Ga0207661_10381599 3300025944 Bacteria 1275
39 Ga0207667_10106854 3300025949 Bacteria 2887
40 Ga0207674_10948967 3300026116 Bacteria 829
41 Ga0307515_10376072 3300028794 Bacteria 1055
42 Ga0307512_10013642 3300030522 Bacteria 7607
43 Ga0316575_10529453 3300031665 Bacteria 513
44 Ga0307405_10479028 3300031731 Bacteria 993
45 Ga0307409_101921967 3300031995 Bacteria 621
46 Ga0316583_10297569 3300032133 Bacteria 558
47 Ga0307507_10035631 3300033179 Bacteria 5107
48 Ga0307510_10279726 3300033180 Bacteria 1140
49 Ga0307510_10459315 3300033180 Bacteria 714
50 Ga0316574_0627062 3300035398 Bacteria 663
51 Ga0373924_0314381 3300035410 Bacteria 696
52 Ga0373937_0140666 3300036401 Bacteria 2258
53 Ga0395899_0116934 3300037312 Bacteria 1913
54 Ga0395900_0020540 3300037418 Bacteria 6743
55 Ga0395900_0085428 3300037418 Bacteria 3243
56 Ga0395900_0187249 3300037418 Bacteria 2101
57 Ga0395900_0347093 3300037418 Bacteria 1458
58 Ga0395898_0096444 3300037466 Bacteria 2841
59 Ga0395898_0197378 3300037466 Bacteria 1922
60 Ga0395905_0444012 3300037471 Bacteria 1195
61 Ga0436364_0009585 3300037853 Bacteria 1212
62 Ga0436364_0161458 3300037853 Bacteria 2457
63 Ga0436364_0507400 3300037853 Bacteria 22216
64 Ga0436364_0590475 3300037853 Unclassified 1231
65 Ga0395901_0069135 3300038443 Bacteria 3678
66 Ga0395901_0547538 3300038443 Bacteria 1173
67 Ga0436365_0878725 3300039437 Bacteria 1639
68 Ga0436365_1201663 3300039437 Bacteria 749
69 Ga0436362_1105278 3300039453 Bacteria 1794
70 Ga0451807_0536313 3300041486 Bacteria 885
71 Ga0451833_0469030 3300041491 Bacteria 532
72 Ga0466972_0008113 3300044658 Bacteria 5264
73 Ga0466972_0626668 3300044658 Bacteria 509
74 Ga0466965_0022205 3300044683 Bacteria 3059
75 Ga0466965_0051467 3300044683 Bacteria 2043
76 Ga0466965_0057588 3300044683 Bacteria 1937
77 Ga0466963_0927950 3300044694 Bacteria 613
78 Ga0466964_0716699 3300044706 Bacteria 559
79 Ga0466970_0067586 3300044765 Bacteria 1919
80 Ga0466970_0911625 3300044765 Bacteria 517
81 Ga0466960_0001052 3300044901 Bacteria 9876
82 Ga0466960_0002507 3300044901 Bacteria 6905
83 Ga0466960_0002870 3300044901 Bacteria 6537
84 Ga0466960_0561708 3300044901 Bacteria 674
85 Ga0466967_0165883 3300045976 Bacteria 2076
86 Ga0466967_0504099 3300045976 Bacteria 1188
87 Ga0466967_2475438 3300045976 Bacteria 514
88 Ga0495607_0034424 3300046501 Bacteria 3073
89 Ga0495658_0544500 3300046683 Bacteria 743
90 Ga0495658_0773522 3300046683 Bacteria 615
91 Ga0495674_1464442 3300047319 Bacteria 507
92 Ga0495683_0000937 3300047323 Bacteria 20565
93 Ga0496100_0029428 3300048903 Bacteria 3397
94 Ga0496108_0312159 3300048911 Bacteria 1370
95 Ga0501031_0405706 3300049568 Bacteria 881
96 Ga0501040_0208411 3300049576 Bacteria 1389
97 Ga0501046_0113212 3300049580 Bacteria 2071
98 Ga0501070_1337284 3300049586 Bacteria 546
99 Ga0501071_1223659 3300049587 Bacteria 580
100 Ga0501074_0228121 3300049590 Bacteria 1326
101 Ga0501076_0117796 3300049592 Bacteria 2150
102 Ga0501279_031703 3300049775 Bacteria 786
103 Ga0501035_1052420 3300049822 Bacteria 638
104 Ga0501045_0256750 3300049824 Bacteria 1301
105 nmdc:mga05p37_492730_c1 3300050507 Bacteria 1408
106 nmdc:mga05p37_605956_c1 3300050507 Unclassified 1235
107 Ga0495601_0051460 3300053077 Bacteria 2599
108 Ga0495601_0117699 3300053077 Bacteria 1724
109 Ga0500577_0083766 3300053142 Bacteria 1276
110 2738869653 2738541305 Bacteria 4910150
111 2808845701 2808606359 Bacteria 9866990
112 2812322973 2811994872 Bacteria 4121241
113 2870788513 2870782633 Bacteria 9624083
114 2895436257 2895427314 Bacteria 13147766
115 2915358720 2915358134 Bacteria 6050864
116 2956942460 2956939328 Bacteria 3474458
117 2997607315 2997600082 Bacteria 9896405
118 3001119637 3001119090 Bacteria 3449530
119 8008575552 8008574985 Bacteria 7815457
120 8054476898 8054472261 Bacteria 7464355
121 8056209489 8056207758 Bacteria 8639239
122 Ga0501082_0630999
123 ZMR_F548DK201AS8MN
124 Ga0006562J51391_1017412
125 Ga0070658_10293770
126 Ga0070683_100086146
127 Ga0070680_100120364
128 Ga0070714_100024624
129 Ga0070681_10070074
130 Ga0070699_100459878
131 Ga0070699_100575628
132 Ga0070699_101353421
133 Ga0070684_100625026
134 Ga0068855_100097201
135 Ga0068855_101021068
136 Ga0068857_101017264
137 Ga0068859_100772103
138 Ga0070717_10151712
139 Ga0070717_10505213
140 Ga0075429_100300927
141 Ga0097620_100772194
142 Ga0114129_10624097
143 Ga0105242_11311737
144 Ga0105246_10204009
145 Ga0157369_10057970
146 Ga0197907_10040846
147 Ga0197907_10727374
148 Ga0206349_1079084
149 Ga0206353_10226169
150 Ga0206353_10840609
151 Ga0213875_10002958
152 Ga0213875_10013802
153 Ga0213875_10173110
154 Ga0213875_10294876
155 Ga0224712_10051632
156 Ga0207647_10548773
157 Ga0207664_10033727
158 Ga0207665_10314774
159 Ga0207661_10381599
160 Ga0207667_10106854
161 Ga0207674_10948967
162 Ga0307515_10376072
163 Ga0307512_10013642
164 Ga0316575_10529453
165 Ga0307405_10479028
166 Ga0307409_101921967
167 Ga0316583_10297569
168 Ga0307507_10035631
169 Ga0307510_10279726
170 Ga0307510_10459315
171 Ga0316574_0627062
172 Ga0373924_0314381
173 Ga0373937_0140666
174 Ga0395899_0116934
175 Ga0395900_0020540
176 Ga0395900_0085428
177 Ga0395900_0187249
178 Ga0395900_0347093
179 Ga0395898_0096444
180 Ga0395898_0197378
181 Ga0395905_0444012
182 Ga0436364_0009585
183 Ga0436364_0161458
184 Ga0436364_0507400
185 Ga0436364_0590475
186 Ga0395901_0069135
187 Ga0395901_0547538
188 Ga0436365_0878725
189 Ga0436365_1201663
190 Ga0436362_1105278
191 Ga0451807_0536313
192 Ga0451833_0469030
193 Ga0466972_0008113
194 Ga0466972_0626668
195 Ga0466965_0022205
196 Ga0466965_0051467
197 Ga0466965_0057588
198 Ga0466963_0927950
199 Ga0466964_0716699
200 Ga0466970_0067586
201 Ga0466970_0911625
202 Ga0466960_0001052
203 Ga0466960_0002507
204 Ga0466960_0002870
205 Ga0466960_0561708
206 Ga0466967_0165883
207 Ga0466967_0504099
208 Ga0466967_2475438
209 Ga0495607_0034424
210 Ga0495658_0544500
211 Ga0495658_0773522
212 Ga0495674_1464442
213 Ga0495683_0000937
214 Ga0496100_0029428
215 Ga0496108_0312159
216 Ga0501031_0405706
217 Ga0501040_0208411
218 Ga0501046_0113212
219 Ga0501070_1337284
220 Ga0501071_1223659
221 Ga0501074_0228121
222 Ga0501076_0117796
223 Ga0501279_031703
224 Ga0501035_1052420
225 Ga0501045_0256750
226 nmdc:mga05p37_492730_c1
227 nmdc:mga05p37_605956_c1
228 Ga0495601_0051460
229 Ga0495601_0117699
230 Ga0500577_0083766
231 2738869653
232 2808845701
233 2812322973
234 2870788513
235 2895436257
236 2915358720
237 2956942460
238 2997607315
239 3001119637
240 8008575552
241 8054476898
242 8056209489

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04075

F420H2_quin_red

F420H(2)-dependent quinone reductase

32

163

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3r5y-assembly3.cif.gz_C structure of a deazaflavin-dependent nitroreductase from nocardia farcinica, with co-factor f420 0.9649 4 127
3r5r-assembly2.cif.gz_B structure of ddn, the deazaflavin-dependent nitroreductase from mycobacterium tuberculosis involved in bioreductive activation of pa-824, with co-factor f420 0.9522 36 129
4y9i-assembly1.cif.gz_A structure of f420-h2 dependent reductase (fdr-a) msmeg_2027 0.94 37 129
3r5z-assembly2.cif.gz_B structure of a deazaflavin-dependent reductase from nocardia farcinica, with co-factor f420 0.9246 5 127
7kl8-assembly1.cif.gz_B structure of f420 binding protein rv1558 from mycobacterium tuberculosis with f420 bound 0.9234 6 129
ID Description Score Start End Superfamily
3r5yD00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9558 3 127 2.30.110.10
4y9iA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9401 37 129 2.30.110.10
af_O53328_2_119_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9303 34 127 2.30.110.10
af_P9WP15_14_151_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9245 13 127 2.30.110.10
3r5yD00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9199 3 127 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A5B9G2E2-F1-model_v4 Nitroreductase family deazaflavin-dependent oxidoreductase 0.9926 1 120 GO:0005886
GO:0016491
GO:0070967
AF-A0A4R8VWK5-F1-model_v4 deleted 0.9891 1 129
AF-A0A6H3J4R1-F1-model_v4 deleted 0.9889 1 129
AF-A0A1C4J1D5-F1-model_v4 Deazaflavin-dependent oxidoreductase, nitroreductase family 0.9881 1 129 GO:0005886
GO:0016491
GO:0070967
AF-D9VMN6-F1-model_v4 Nitroreductase 0.988 1 127 GO:0005886
GO:0016491
GO:0070967

Map