F106277

General Info

Members Datasets Scaffolds Average Seq Length
120 87 240 706

Family's Representative Sequence

Representative Sequence 3300025944|Ga0207661_10041118|Ga0207661_100411184
Length 787
Sequence VGDHFVLEGVGPSPHPLTDVTAGRGQGPAPSEFAEGVVPTGGPHPLKVVPSKRKLSFRNTPADTRSMRVALAGNPNSGKTTLFNALTGMHQKVANYPGVTVEKKEGQFVHRGQPFTLIDLPGTYSLSAQSQDERVVRDVLLGVPPHEPLDMVLLVVDASHLERHLYLATQVLDLGLPVVIALTMNDEARYLGRGVDAAALGAQLGVPVVEVIAPRNYGIVDLREAVTQAVGAVPTALPWRIGDQFLQSIDELALQIGQHRPAPLSFRRYVALQLLLESRREHPLLHLPGVAELVAQHRSKLDASGIRWREAEARGRYDWIRDAAREARQPLAGYKPTLSDRVDRVLLHPLWGLLIFVSVMGLMFQSIFSWAQPFMNLIDSGFSWLGTTVSQTLPAGPLNGLLVDGVIAGVGAVMVFLPQILLLFFFVAMLEDSGYMARAAFLMNRHMRRFGLHGRAFIPMLSGFACAIPAIMSTRTIADEKDRLITILVVPLTSCSARLPVYALMIAACVPPVAIIGGLFDARGAVLWGAYVLSLLTAVTMALLFRRTILRGAPQAFIMELPPYRLPAWRTVLTTMWERGKLFLTQAGTIILSISIVLWFLANFPQHPDLQQHYDGLRTSARASLSGAALDTRLAQLDDDQQGEQLRTSFAGDLGHMIEPALRPLGFDWKIGVGLIGSFVAREVFVSTMAVVYNVGAGADEKSHGLQQAIRSDINPETGKPTFSLLVALNLILFYILAMQCMSTLAVVKRETNGWKWPLFMLGYMTALAWLTCCVVYQVGTRVFHLG

Samples

Sample ID Description Type Environment
1 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
28 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
34 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
35 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
36 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
37 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
38 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
39 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
40 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
41 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
42 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
43 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
44 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
45 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
46 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
47 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
48 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
49 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
50 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
51 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
52 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
53 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
54 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
55 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
58 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
63 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
64 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
65 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
66 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
67 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
68 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
69 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
70 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
75 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
76 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
77 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
78 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
79 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
80 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
83 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
84 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
85 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
86 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
87 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.67
Nodule 0
Rhizoplane 6.67
Rhizosphere 89.17
Stem 0
Stem Tuber 0
Unclassified 4.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207661_10041118 3300025944 Bacteria 3638
2 rootH1_10000232 3300003323 Bacteria 4671
3 Ga0065712_10085098 3300005290 Bacteria 2720
4 Ga0065715_10091669 3300005293 Bacteria 5620
5 Ga0070682_100001562 3300005337 Bacteria 12800
6 Ga0070682_100008997 3300005337 Bacteria 5643
7 Ga0070692_10027852 3300005345 Bacteria 2805
8 Ga0070688_100032722 3300005365 Bacteria 3138
9 Ga0070694_100008805 3300005444 Bacteria 6182
10 Ga0070685_10005493 3300005466 Bacteria 6423
11 Ga0070706_100067932 3300005467 Bacteria 3296
12 Ga0070707_100047447 3300005468 Bacteria 4112
13 Ga0070665_100095635 3300005548 Bacteria 2976
14 Ga0068855_100000076 3300005563 Bacteria 118910
15 Ga0068855_100001398 3300005563 Bacteria 29920
16 Ga0068855_100031557 3300005563 Bacteria 6327
17 Ga0068863_100076443 3300005841 Bacteria 3168
18 Ga0081539_10000156 3300005985 Bacteria 158871
19 Ga0075428_100000319 3300006844 Bacteria 47598
20 Ga0075428_100024014 3300006844 Bacteria 6748
21 Ga0075428_100027315 3300006844 Bacteria 6317
22 Ga0075428_100072245 3300006844 Bacteria 3770
23 Ga0075430_100001932 3300006846 Bacteria 17018
24 Ga0075431_100000161 3300006847 Bacteria 46914
25 Ga0075431_100040460 3300006847 Bacteria 4804
26 Ga0075429_100001219 3300006880 Bacteria 20880
27 Ga0075429_100036537 3300006880 Bacteria 4273
28 Ga0111539_10004425 3300009094 Bacteria 18362
29 Ga0111539_10005792 3300009094 Bacteria 15968
30 Ga0111539_10017941 3300009094 Bacteria 8766
31 Ga0114129_10003622 3300009147 Bacteria 21731
32 Ga0105242_10029574 3300009176 Bacteria 4370
33 Ga0105249_10012499 3300009553 Bacteria 7484
34 Ga0105239_10062722 3300010375 Bacteria 4079
35 Ga0163162_10034643 3300013306 Bacteria 5025
36 Ga0157375_10039502 3300013308 Bacteria 4543
37 Ga0163161_10017979 3300017792 Bacteria 4956
38 Ga0207684_10009598 3300025910 Bacteria 8536
39 Ga0207709_10041615 3300025935 Bacteria 2758
40 Ga0207667_10000886 3300025949 Bacteria 38145
41 Ga0207667_10005192 3300025949 Bacteria 15899
42 Ga0207667_10143685 3300025949 Bacteria 2456
43 Ga0207641_10023869 3300026088 Bacteria 5041
44 Ga0207675_100007643 3300026118 Bacteria 10208
45 Ga0207428_10005389 3300027907 Bacteria 11934
46 Ga0207428_10012311 3300027907 Bacteria 7518
47 Ga0265337_1001124 3300028556 Bacteria 13682
48 Ga0265318_10000254 3300028577 Bacteria 46398
49 Ga0265323_10002168 3300028653 Bacteria 9153
50 Ga0265323_10005620 3300028653 Bacteria 5320
51 Ga0265324_10000081 3300029957 Bacteria 75195
52 Ga0265332_10018365 3300031238 Bacteria 3085
53 Ga0265332_10021087 3300031238 Bacteria 2879
54 Ga0265328_10009305 3300031239 Bacteria 4005
55 Ga0265320_10002890 3300031240 Bacteria 11783
56 Ga0265320_10013617 3300031240 Bacteria 4668
57 Ga0265329_10000400 3300031242 Bacteria 22800
58 Ga0265339_10001090 3300031249 Bacteria 20589
59 Ga0265327_10014031 3300031251 Bacteria 5274
60 Ga0265316_10009832 3300031344 Bacteria 8776
61 Ga0265316_10022804 3300031344 Bacteria 5268
62 Ga0265316_10026812 3300031344 Bacteria 4785
63 Ga0307508_10007743 3300031616 Bacteria 9984
64 Ga0265314_10000001 3300031711 Bacteria 3792860
65 Ga0265314_10001222 3300031711 Bacteria 29436
66 Ga0265314_10003730 3300031711 Bacteria 14582
67 Ga0265314_10012303 3300031711 Bacteria 6991
68 Ga0265342_10008546 3300031712 Bacteria 7323
69 Ga0316576_10011540 3300031727 Bacteria 5795
70 Ga0307516_10002364 3300031730 Bacteria 25288
71 Ga0307413_10043672 3300031824 Bacteria 2643
72 Ga0307406_10032043 3300031901 Bacteria 3205
73 Ga0373955_0002276 3300035172 Bacteria 8339
74 Ga0373961_0000064 3300035241 Bacteria 58337
75 Ga0316574_0001956 3300035398 Bacteria 10102
76 Ga0373933_0011509 3300035724 Bacteria 4881
77 Ga0373937_0000272 3300036401 Bacteria 49656
78 Ga0316584_0023018 3300036712 Unclassified 4549
79 Ga0395900_0020753 3300037418 Bacteria 6715
80 Ga0451577_0002066 3300042876 Bacteria 24791
81 Ga0451577_0025101 3300042876 Bacteria 5410
82 Ga0453683_0001812 3300044673 Bacteria 17636
83 Ga0453684_0000993 3300044712 Bacteria 92622
84 Ga0466960_0006110 3300044901 Bacteria 4817
85 Ga0495686_0025193 3300047472 Bacteria 3901
86 Ga0496104_0025664 3300048907 Bacteria 5434
87 Ga0496104_0086401 3300048907 Bacteria 2994
88 Ga0496109_0006955 3300048912 Bacteria 9549
89 Ga0496110_0002839 3300048913 Bacteria 13074
90 Ga0496112_0007493 3300048915 Bacteria 9688
91 Ga0496113_0070723 3300048916 Bacteria 2653
92 Ga0496114_0011546 3300048917 Bacteria 7058
93 Ga0496114_0077670 3300048917 Bacteria 2799
94 Ga0501034_0000930 3300049571 Bacteria 42622
95 Ga0501034_0048499 3300049571 Bacteria 4286
96 Ga0501046_0000070 3300049580 Bacteria 108137
97 Ga0501046_0003788 3300049580 Bacteria 13844
98 Ga0501046_0033356 3300049580 Bacteria 4160
99 Ga0501046_0106406 3300049580 Unclassified 2147
100 Ga0501047_0002011 3300049581 Bacteria 19498
101 Ga0501047_0031634 3300049581 Bacteria 5105
102 Ga0501047_0065231 3300049581 Bacteria 3510
103 Ga0501048_0027929 3300049582 Bacteria 4098
104 Ga0501072_0101910 3300049588 Unclassified 2282
105 Ga0501077_0073960 3300049593 Unclassified 2159
106 Ga0501083_0003607 3300049744 Bacteria 10853
107 Ga0501044_0047979 3300049823 Bacteria 4415
108 nmdc:mga05p37_26_c1 3300050507 Bacteria 116369
109 nmdc:mga05p37_5407_c1 3300050507 Bacteria 15011
110 nmdc:mga09592_840_c1 3300050508 Bacteria 23851
111 nmdc:mga0qj67_1049_c1 3300050509 Bacteria 19121
112 nmdc:mga06r32_318_c1 3300050510 Bacteria 40308
113 nmdc:mga06r32_35121_c1 3300050510 Bacteria 4730
114 nmdc:mga08y16_3062_c1 3300050511 Bacteria 17280
115 nmdc:mga08y16_77644_c1 3300050511 Bacteria 3463
116 Ga0495619_0001307 3300053085 Bacteria 16364
117 Ga0500643_009543 3300053087 Bacteria 3698
118 Ga0500568_0023496 3300053139 Bacteria 2622
119 Ga0501084_0028218 3300054114 Unclassified 4690
120 Ga0501082_0028711 3300060353 Bacteria 4791
121 Ga0207661_10041118
122 rootH1_10000232
123 Ga0065712_10085098
124 Ga0065715_10091669
125 Ga0070682_100001562
126 Ga0070682_100008997
127 Ga0070692_10027852
128 Ga0070688_100032722
129 Ga0070694_100008805
130 Ga0070685_10005493
131 Ga0070706_100067932
132 Ga0070707_100047447
133 Ga0070665_100095635
134 Ga0068855_100000076
135 Ga0068855_100001398
136 Ga0068855_100031557
137 Ga0068863_100076443
138 Ga0081539_10000156
139 Ga0075428_100000319
140 Ga0075428_100024014
141 Ga0075428_100027315
142 Ga0075428_100072245
143 Ga0075430_100001932
144 Ga0075431_100000161
145 Ga0075431_100040460
146 Ga0075429_100001219
147 Ga0075429_100036537
148 Ga0111539_10004425
149 Ga0111539_10005792
150 Ga0111539_10017941
151 Ga0114129_10003622
152 Ga0105242_10029574
153 Ga0105249_10012499
154 Ga0105239_10062722
155 Ga0163162_10034643
156 Ga0157375_10039502
157 Ga0163161_10017979
158 Ga0207684_10009598
159 Ga0207709_10041615
160 Ga0207667_10000886
161 Ga0207667_10005192
162 Ga0207667_10143685
163 Ga0207641_10023869
164 Ga0207675_100007643
165 Ga0207428_10005389
166 Ga0207428_10012311
167 Ga0265337_1001124
168 Ga0265318_10000254
169 Ga0265323_10002168
170 Ga0265323_10005620
171 Ga0265324_10000081
172 Ga0265332_10018365
173 Ga0265332_10021087
174 Ga0265328_10009305
175 Ga0265320_10002890
176 Ga0265320_10013617
177 Ga0265329_10000400
178 Ga0265339_10001090
179 Ga0265327_10014031
180 Ga0265316_10009832
181 Ga0265316_10022804
182 Ga0265316_10026812
183 Ga0307508_10007743
184 Ga0265314_10000001
185 Ga0265314_10001222
186 Ga0265314_10003730
187 Ga0265314_10012303
188 Ga0265342_10008546
189 Ga0316576_10011540
190 Ga0307516_10002364
191 Ga0307413_10043672
192 Ga0307406_10032043
193 Ga0373955_0002276
194 Ga0373961_0000064
195 Ga0316574_0001956
196 Ga0373933_0011509
197 Ga0373937_0000272
198 Ga0316584_0023018
199 Ga0395900_0020753
200 Ga0451577_0002066
201 Ga0451577_0025101
202 Ga0453683_0001812
203 Ga0453684_0000993
204 Ga0466960_0006110
205 Ga0495686_0025193
206 Ga0496104_0025664
207 Ga0496104_0086401
208 Ga0496109_0006955
209 Ga0496110_0002839
210 Ga0496112_0007493
211 Ga0496113_0070723
212 Ga0496114_0011546
213 Ga0496114_0077670
214 Ga0501034_0000930
215 Ga0501034_0048499
216 Ga0501046_0000070
217 Ga0501046_0003788
218 Ga0501046_0033356
219 Ga0501046_0106406
220 Ga0501047_0002011
221 Ga0501047_0031634
222 Ga0501047_0065231
223 Ga0501048_0027929
224 Ga0501072_0101910
225 Ga0501077_0073960
226 Ga0501083_0003607
227 Ga0501044_0047979
228 nmdc:mga05p37_26_c1
229 nmdc:mga05p37_5407_c1
230 nmdc:mga09592_840_c1
231 nmdc:mga0qj67_1049_c1
232 nmdc:mga06r32_318_c1
233 nmdc:mga06r32_35121_c1
234 nmdc:mga08y16_3062_c1
235 nmdc:mga08y16_77644_c1
236 Ga0495619_0001307
237 Ga0500643_009543
238 Ga0500568_0023496
239 Ga0501084_0028218
240 Ga0501082_0028711

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02421

FeoB_N

Ferrous iron transport protein B

67

226

0.98

PF07664

FeoB_C

Ferrous iron transport protein B C terminus

527

579

0.97

PF07670

Gate

Nucleoside recognition

413

509

0.97

PF07670

Gate

Nucleoside recognition

584

755

0.97

PF01926

MMR_HSR1

50S ribosome-binding GTPase

68

184

0.8

PF09439

SRPRB

Signal recognition particle receptor beta subunit

64

143

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
3a1w-assembly1.cif.gz_A crystal structue of the g domain of t. maritima feob iron iransporter 0.9034 23 184
2wji-assembly1.cif.gz_A structure and function of the feob g-domain from methanococcus jannaschii 0.8923 22 187
3a1w-assembly1.cif.gz_A crystal structue of the g domain of t. maritima feob iron iransporter 0.8766 23 184
2wji-assembly1.cif.gz_A structure and function of the feob g-domain from methanococcus jannaschii 0.8761 22 187
3iby-assembly4.cif.gz_D structure of cytosolic domain of l. pneumophila feob 0.8718 25 285
ID Description Score Start End Superfamily
3hytC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9335 22 184 3.40.50.300
3hytC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8752 22 184 3.40.50.300
3a1tA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8746 23 187 3.40.50.300
3w5jA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.874 22 189 3.40.50.300
4nonB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8638 24 196 3.40.50.300
ID Description Score Start End GO Terms
AF-M6R403-F1-model_v4 Ferrous iron transport protein B C-terminal domain protein 0.9691 350 708 GO:0005886
GO:0015093
AF-A0A7Y1W3X0-F1-model_v4 Ferrous iron transport protein B 0.9649 383 707 GO:0005886
GO:0015093
AF-A0A848WQ26-F1-model_v4 Ferrous iron transporter B 0.96 342 710 GO:0005886
GO:0015093
AF-A0A1F3XXQ7-F1-model_v4 Ferrous iron transporter B 0.9591 373 708 GO:0005886
GO:0015093
AF-A0A833ALQ5-F1-model_v4 Ferrous iron transport protein B 0.9572 332 710 GO:0005525
GO:0005886
GO:0015093

Map