F105483

General Info

Members Datasets Scaffolds Average Seq Length
120 69 240 368

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100382430|Ga0075428_1003824302
Length 402
Sequence VNFGRVLTVPHSVRFSPRVFAILLLSLLFAVACDRSAQWADPPTRAGGPATGSTGPQPDHETTITIVGSGDVLLHPDLWDQAHEDAGAEGRDGYDFEPLFEGVRDVVSGADLAICHMEPPLAAENGPFIGFPRFSVPPQVVPALADIGYDSCSTASNHSIDHGEEGIKNTLDALDASHIRHAGTARTPAEHNTITVLTVNGVKIAHLSYAFGFNGLKRPSGKEWEANLIDKQAILAEAHRARAAGAAIVVLSLHWGTEYSHQLNSQQRSLAPQLLASPDIDLILGHHAHVVQPFEKIGDKWVAYGHGNEVAHHAQPINDNREGILSRFTFSQVSPGKWRVTKAEAIPIWMQLSPDDRLLNLANAIADPATSASAKRTYQAAYDRIKSYVDALGADQDGLLIP

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
4 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
5 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
6 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
7 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
8 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
9 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
12 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
13 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
15 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
16 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
17 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
18 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
19 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
20 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
21 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
26 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
27 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
28 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
29 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
30 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
31 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
32 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
33 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
34 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
35 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
36 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
37 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
38 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
39 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
40 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
41 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
42 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
43 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
44 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
45 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
46 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
47 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
48 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
49 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
50 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
51 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
52 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
53 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
54 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
60 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
61 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
62 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
63 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
64 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
66 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
67 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
68 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
69 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.17
Metatranscriptomes 0.83
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.33
Nodule 0
Rhizoplane 9.17
Rhizosphere 85.83
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100382430 3300006844 Bacteria 1509
2 Ga0065704_10158357 3300005289 Bacteria 1373
3 Ga0070665_100070070 3300005548 Bacteria 3513
4 Ga0068855_100006113 3300005563 Bacteria 14684
5 Ga0068855_100209993 3300005563 Bacteria 2188
6 Ga0068857_100156796 3300005577 Bacteria 2064
7 Ga0068852_100137386 3300005616 Bacteria 2258
8 Ga0068864_100007586 3300005618 Bacteria 8937
9 Ga0068863_100114914 3300005841 Bacteria 2564
10 Ga0081540_1020721 3300005983 Bacteria 3942
11 Ga0075364_10040646 3300006051 Bacteria 3016
12 Ga0075364_10058900 3300006051 Bacteria 2517
13 Ga0075367_10051129 3300006178 Bacteria 2442
14 Ga0075428_100114469 3300006844 Bacteria 2938
15 Ga0105240_10022989 3300009093 Bacteria 8256
16 Ga0114129_10058757 3300009147 Bacteria 5379
17 Ga0105237_10030557 3300009545 Bacteria 5470
18 Ga0105237_10102246 3300009545 Bacteria 2857
19 Ga0105238_10211446 3300009551 Bacteria 1916
20 Ga0105239_10250449 3300010375 Bacteria 1989
21 Ga0157370_10014899 3300013104 Bacteria 7931
22 Ga0157369_10009684 3300013105 Bacteria 11018
23 Ga0163163_10081790 3300014325 Bacteria 3232
24 Ga0163163_10140051 3300014325 Bacteria 2461
25 Ga0206353_10511094 3300020082 Bacteria 1424
26 Ga0207647_10025918 3300025904 Bacteria 3842
27 Ga0207695_10123042 3300025913 Bacteria 2560
28 Ga0207671_10017636 3300025914 Bacteria 5498
29 Ga0207671_10121591 3300025914 Bacteria 1996
30 Ga0207674_10064198 3300026116 Bacteria 3704
31 Ga0307410_10064920 3300031852 Bacteria 2510
32 Ga0307409_100007451 3300031995 Bacteria 6547
33 Ga0307409_100096596 3300031995 Bacteria 2438
34 Ga0307416_100009565 3300032002 Bacteria 6354
35 Ga0307416_100138446 3300032002 Bacteria 2207
36 Ga0307416_100319528 3300032002 Bacteria 1554
37 Ga0307415_100008386 3300032126 Bacteria 5721
38 Ga0307415_100036303 3300032126 Bacteria 3228
39 Ga0307415_100039231 3300032126 Bacteria 3128
40 Ga0436363_0546278 3300039450 Bacteria 1821
41 Ga0466972_0153369 3300044658 Bacteria 1083
42 Ga0466965_0011031 3300044683 Bacteria 4226
43 Ga0466965_0092675 3300044683 Bacteria 1538
44 Ga0466966_0002928 3300044684 Bacteria 11250
45 Ga0466966_0012640 3300044684 Bacteria 5596
46 Ga0466966_0014020 3300044684 Bacteria 5306
47 Ga0466966_0046537 3300044684 Bacteria 2769
48 Ga0466961_0006495 3300044693 Bacteria 7430
49 Ga0466961_0037421 3300044693 Bacteria 3113
50 Ga0466961_0055534 3300044693 Bacteria 2524
51 Ga0466961_0104201 3300044693 Bacteria 1786
52 Ga0466961_0155005 3300044693 Bacteria 1429
53 Ga0466963_0006517 3300044694 Bacteria 6913
54 Ga0466963_0009278 3300044694 Bacteria 5923
55 Ga0466963_0042816 3300044694 Bacteria 2974
56 Ga0466963_0053552 3300044694 Bacteria 2679
57 Ga0466963_0150083 3300044694 Bacteria 1618
58 Ga0466971_0010110 3300044719 Bacteria 4121
59 Ga0466970_0014571 3300044765 Bacteria 4038
60 Ga0466970_0024312 3300044765 Bacteria 3167
61 Ga0466970_0161311 3300044765 Bacteria 1240
62 Ga0466957_0002856 3300044842 Bacteria 9351
63 Ga0466957_0020049 3300044842 Bacteria 3935
64 Ga0466957_0062447 3300044842 Bacteria 2288
65 Ga0466957_0089016 3300044842 Bacteria 1932
66 Ga0466957_0113415 3300044842 Bacteria 1721
67 Ga0466960_0015951 3300044901 Bacteria 3248
68 Ga0466960_0048714 3300044901 Bacteria 2037
69 Ga0466960_0073626 3300044901 Bacteria 1705
70 Ga0466960_0128752 3300044901 Bacteria 1334
71 Ga0466960_0153558 3300044901 Bacteria 1232
72 Ga0466959_0004814 3300045049 Bacteria 9117
73 Ga0466959_0030614 3300045049 Bacteria 3985
74 Ga0466959_0031865 3300045049 Bacteria 3902
75 Ga0466959_0040950 3300045049 Bacteria 3422
76 Ga0466959_0049989 3300045049 Bacteria 3071
77 Ga0466958_0002605 3300045836 Bacteria 9110
78 Ga0466958_0004165 3300045836 Bacteria 7600
79 Ga0466958_0053361 3300045836 Bacteria 2450
80 Ga0466967_0001900 3300045976 Bacteria 12623
81 Ga0466967_0007394 3300045976 Bacteria 7918
82 Ga0466967_0011005 3300045976 Bacteria 6824
83 Ga0466967_0026578 3300045976 Bacteria 4796
84 Ga0466967_0030609 3300045976 Bacteria 4519
85 Ga0466967_0171010 3300045976 Bacteria 2044
86 Ga0466967_0188470 3300045976 Bacteria 1948
87 Ga0466967_0362576 3300045976 Bacteria 1404
88 Ga0495639_0054748 3300046475 Bacteria 1819
89 Ga0496102_0001657 3300048905 Bacteria 19570
90 Ga0496103_0070846 3300048906 Bacteria 2181
91 Ga0496104_0093350 3300048907 Bacteria 2878
92 Ga0496105_0011955 3300048908 Bacteria 6873
93 Ga0496108_0029446 3300048911 Bacteria 4547
94 Ga0496109_0010954 3300048912 Bacteria 7770
95 Ga0496110_0016475 3300048913 Bacteria 6173
96 Ga0496111_0096542 3300048914 Bacteria 2169
97 Ga0496112_0022291 3300048915 Bacteria 6034
98 Ga0496112_0039738 3300048915 Bacteria 4598
99 Ga0496113_0042471 3300048916 Bacteria 3360
100 Ga0496126_0028570 3300048929 Bacteria 5313
101 Ga0501031_0130473 3300049568 Bacteria 1642
102 Ga0501032_0004468 3300049569 Bacteria 10537
103 Ga0501037_0024260 3300049573 Bacteria 4485
104 Ga0501043_0080849 3300049579 Bacteria 2553
105 Ga0501047_0063940 3300049581 Bacteria 3549
106 Ga0501069_0000536 3300049585 Bacteria 17342
107 Ga0501069_0006113 3300049585 Bacteria 6284
108 Ga0501070_0003148 3300049586 Bacteria 14367
109 Ga0501070_0029131 3300049586 Bacteria 4630
110 Ga0501070_0055696 3300049586 Bacteria 3277
111 Ga0501073_0004185 3300049589 Bacteria 10821
112 Ga0501074_0008285 3300049590 Bacteria 7539
113 Ga0501080_0021320 3300049742 Bacteria 5997
114 Ga0501080_0130233 3300049742 Bacteria 2329
115 Ga0501044_0015927 3300049823 Bacteria 8090
116 Ga0501045_0098072 3300049824 Bacteria 2168
117 nmdc:mga06z11_43479_c1 3300050494 Bacteria 2260
118 nmdc:mga0rr50_214956_c1 3300050513 Bacteria 1585
119 Ga0495619_0077339 3300053085 Bacteria 2235
120 Ga0466962_0055430 3300061719 Bacteria 1894
121 Ga0075428_100382430
122 Ga0065704_10158357
123 Ga0070665_100070070
124 Ga0068855_100006113
125 Ga0068855_100209993
126 Ga0068857_100156796
127 Ga0068852_100137386
128 Ga0068864_100007586
129 Ga0068863_100114914
130 Ga0081540_1020721
131 Ga0075364_10040646
132 Ga0075364_10058900
133 Ga0075367_10051129
134 Ga0075428_100114469
135 Ga0105240_10022989
136 Ga0114129_10058757
137 Ga0105237_10030557
138 Ga0105237_10102246
139 Ga0105238_10211446
140 Ga0105239_10250449
141 Ga0157370_10014899
142 Ga0157369_10009684
143 Ga0163163_10081790
144 Ga0163163_10140051
145 Ga0206353_10511094
146 Ga0207647_10025918
147 Ga0207695_10123042
148 Ga0207671_10017636
149 Ga0207671_10121591
150 Ga0207674_10064198
151 Ga0307410_10064920
152 Ga0307409_100007451
153 Ga0307409_100096596
154 Ga0307416_100009565
155 Ga0307416_100138446
156 Ga0307416_100319528
157 Ga0307415_100008386
158 Ga0307415_100036303
159 Ga0307415_100039231
160 Ga0436363_0546278
161 Ga0466972_0153369
162 Ga0466965_0011031
163 Ga0466965_0092675
164 Ga0466966_0002928
165 Ga0466966_0012640
166 Ga0466966_0014020
167 Ga0466966_0046537
168 Ga0466961_0006495
169 Ga0466961_0037421
170 Ga0466961_0055534
171 Ga0466961_0104201
172 Ga0466961_0155005
173 Ga0466963_0006517
174 Ga0466963_0009278
175 Ga0466963_0042816
176 Ga0466963_0053552
177 Ga0466963_0150083
178 Ga0466971_0010110
179 Ga0466970_0014571
180 Ga0466970_0024312
181 Ga0466970_0161311
182 Ga0466957_0002856
183 Ga0466957_0020049
184 Ga0466957_0062447
185 Ga0466957_0089016
186 Ga0466957_0113415
187 Ga0466960_0015951
188 Ga0466960_0048714
189 Ga0466960_0073626
190 Ga0466960_0128752
191 Ga0466960_0153558
192 Ga0466959_0004814
193 Ga0466959_0030614
194 Ga0466959_0031865
195 Ga0466959_0040950
196 Ga0466959_0049989
197 Ga0466958_0002605
198 Ga0466958_0004165
199 Ga0466958_0053361
200 Ga0466967_0001900
201 Ga0466967_0007394
202 Ga0466967_0011005
203 Ga0466967_0026578
204 Ga0466967_0030609
205 Ga0466967_0171010
206 Ga0466967_0188470
207 Ga0466967_0362576
208 Ga0495639_0054748
209 Ga0496102_0001657
210 Ga0496103_0070846
211 Ga0496104_0093350
212 Ga0496105_0011955
213 Ga0496108_0029446
214 Ga0496109_0010954
215 Ga0496110_0016475
216 Ga0496111_0096542
217 Ga0496112_0022291
218 Ga0496112_0039738
219 Ga0496113_0042471
220 Ga0496126_0028570
221 Ga0501031_0130473
222 Ga0501032_0004468
223 Ga0501037_0024260
224 Ga0501043_0080849
225 Ga0501047_0063940
226 Ga0501069_0000536
227 Ga0501069_0006113
228 Ga0501070_0003148
229 Ga0501070_0029131
230 Ga0501070_0055696
231 Ga0501073_0004185
232 Ga0501074_0008285
233 Ga0501080_0021320
234 Ga0501080_0130233
235 Ga0501044_0015927
236 Ga0501045_0098072
237 nmdc:mga06z11_43479_c1
238 nmdc:mga0rr50_214956_c1
239 Ga0495619_0077339
240 Ga0466962_0055430

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09587

PGA_cap

Bacterial capsule synthesis protein PGA_cap

65

313

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4b9g-assembly2.cif.gz_B structure of cssb subunit complemented with donor strand from cssa subunit of enterotoxigenic escherichia coli colonization factor cs6 0.7838 308 332
8gq9-assembly1.cif.gz_A crystal structure of lasso peptide epimerase mslh 0.7494 53 377
8itg-assembly1.cif.gz_A crystal structure of lasso peptide epimerase mslh in complexed with precursor peptide variant mslaw21g 0.7387 53 377
4c7y-assembly1.cif.gz_A aldehyde oxidoreductase from desulfovibrio gigas (mop), soaked with sodium dithionite and sodium sulfide 0.7301 308 332
8ith-assembly1.cif.gz_A crystal structure of lasso peptide epimerase mslh h295n 0.7299 53 377
ID Description Score Start End Superfamily
af_G5EGJ9_1_223_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8482 309 331 2.60.40.10
af_P9WM79_84_289_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8125 105 297 3.60.21.10
4b9gB00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.7838 308 332 2.60.40.3480
af_P9WM79_84_289_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.761 105 297 3.60.21.10
af_Q4DM83_18_373_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7324 310 334 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A7X5WN21-F1-model_v4 CapA family protein 0.9703 81 309
AF-A0A1H0YCC5-F1-model_v4 Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) 0.9664 52 383
AF-A0A3C2CKM0-F1-model_v4 Poly-gamma-glutamate biosynthesis protein 0.9658 55 174
AF-A0A7X7Q837-F1-model_v4 CapA family protein 0.9649 121 384
AF-A0A1H9EJR4-F1-model_v4 Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) 0.9572 57 384

Map