F105450

General Info

Members Datasets Scaffolds Average Seq Length
120 98 240 145

Family's Representative Sequence

Representative Sequence 3300006358|Ga0068871_100797559|Ga0068871_1007975592
Length 163
Sequence MFAPVHMATHLHFGIEMKMILAGVDGSPRQPDILDAAVSLARRTGAKVLLFRSVGVPMAMPLEALAMTPQDLSGLLERQAKVELEALAEQIPAELRAGVLVATGTAWDTICRAAHDTEADIIVIGSHGYGALDRIVGTTAAKVVNHADRSVLVVRAPERLALG

Samples

Sample ID Description Type Environment
1 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
11 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
12 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
13 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
14 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
15 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
16 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
17 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
18 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
19 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
20 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
21 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
22 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
23 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
31 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
32 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
33 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
34 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
35 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
36 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
37 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
38 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
39 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
40 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
41 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
42 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
43 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
44 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
45 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
46 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
47 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
48 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
49 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
50 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
51 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
54 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
55 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
56 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
57 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
58 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
59 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
60 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
61 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
62 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
63 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
64 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
65 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
66 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
67 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
70 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
71 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
74 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
83 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
84 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
85 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
86 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
89 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
92 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
93 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
94 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
95 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
96 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
97 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
98 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.5
Metatranscriptomes 2.5
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.17
Nodule 0
Rhizoplane 7.5
Rhizosphere 82.5
Stem 0
Stem Tuber 0
Unclassified 30

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068871_100797559 3300006358 Bacteria 870
2 Ga0070689_100001995 3300005340 Bacteria 13223
3 Ga0070689_100517659 3300005340 Bacteria 1024
4 Ga0070689_101392988 3300005340 Bacteria 633
5 Ga0070668_100758650 3300005347 Viruses 859
6 Ga0070688_100107698 3300005365 Bacteria 1848
7 Ga0070685_10618919 3300005466 Unclassified 781
8 Ga0070698_100715349 3300005471 Bacteria 944
9 Ga0070698_100771208 3300005471 Bacteria 905
10 Ga0070686_100530117 3300005544 Bacteria 918
11 Ga0070665_101819966 3300005548 Unclassified 615
12 Ga0068855_100390287 3300005563 Bacteria 1527
13 Ga0068855_100553965 3300005563 Bacteria 1244
14 Ga0068855_102080670 3300005563 Bacteria 572
15 Ga0068864_100848310 3300005618 Archaea 900
16 Ga0068864_101424198 3300005618 Unclassified 695
17 Ga0068860_101316920 3300005843 Unclassified 743
18 Ga0070717_10000320 3300006028 Bacteria 31376
19 Ga0070717_10002218 3300006028 Bacteria 13644
20 Ga0070717_10038961 3300006028 Bacteria 3865
21 Ga0070717_10181746 3300006028 Bacteria 1834
22 Ga0075428_101895424 3300006844 Bacteria 619
23 Ga0075429_100843164 3300006880 Bacteria 802
24 Ga0075435_100903226 3300007076 Unclassified 770
25 Ga0105247_10013486 3300009101 Bacteria 4901
26 Ga0105248_11108336 3300009177 Unclassified 895
27 Ga0157374_10207773 3300013296 Bacteria 1919
28 Ga0157378_10067509 3300013297 Bacteria 3205
29 Ga0163163_11123430 3300014325 Unclassified 849
30 Ga0157377_10522786 3300014745 Unclassified 833
31 Ga0157376_11400209 3300014969 Unclassified 731
32 Ga0206352_11121731 3300020078 Bacteria 521
33 Ga0207710_10006759 3300025900 Bacteria 4888
34 Ga0207707_10376810 3300025912 Unclassified 1220
35 Ga0207646_10090831 3300025922 Bacteria 2734
36 Ga0207670_10000238 3300025936 Bacteria 34801
37 Ga0207670_10728332 3300025936 Unclassified 823
38 Ga0207670_11143799 3300025936 Bacteria 658
39 Ga0207667_10482885 3300025949 Bacteria 1258
40 Ga0207678_10277571 3300026067 Bacteria 1438
41 Ga0265337_1002159 3300028556 Bacteria 9249
42 Ga0265334_10062275 3300028573 Unclassified 1404
43 Ga0265332_10032905 3300031238 Bacteria 2258
44 Ga0265320_10000096 3300031240 Bacteria 74345
45 Ga0307509_10000026 3300031507 Bacteria 231153
46 Ga0307509_10179921 3300031507 Bacteria 1981
47 Ga0307514_10190966 3300031649 Unclassified 1304
48 Ga0265314_10022513 3300031711 Bacteria 4827
49 Ga0307516_10270888 3300031730 Bacteria 1384
50 Ga0307406_10018731 3300031901 Bacteria 4050
51 Ga0307406_10028234 3300031901 Bacteria 3388
52 Ga0307406_10479387 3300031901 Unclassified 1004
53 Ga0307412_10020301 3300031911 Bacteria 4042
54 Ga0307416_101386016 3300032002 Unclassified 809
55 Ga0307415_100197220 3300032126 Unclassified 1594
56 Ga0307415_101348533 3300032126 Bacteria 677
57 Ga0373923_0018925 3300035111 Bacteria 2659
58 Ga0373957_0172149 3300035120 Unclassified 895
59 Ga0373943_0021851 3300035170 Bacteria 2958
60 Ga0373943_0301348 3300035170 Unclassified 910
61 Ga0373946_0291500 3300035171 Bacteria 805
62 Ga0373955_0414623 3300035172 Bacteria 819
63 Ga0373935_0091735 3300035692 Bacteria 1990
64 Ga0373935_0092995 3300035692 Bacteria 1977
65 Ga0373927_0101726 3300035695 Bacteria 1869
66 Ga0373937_0108448 3300036401 Bacteria 2582
67 Ga0373937_0228243 3300036401 Bacteria 1753
68 Ga0373925_0141494 3300037068 Bacteria 1883
69 Ga0373925_0182431 3300037068 Bacteria 1662
70 Ga0395905_0049950 3300037471 Unclassified 3920
71 Ga0436365_1804534 3300039437 Bacteria 1948
72 Ga0439436_0190603 3300041404 Bacteria 585
73 Ga0451807_1554657 3300041486 Unclassified 500
74 Ga0451851_0029887 3300041507 Unclassified 537
75 Ga0451853_0696096 3300041512 Unclassified 1134
76 Ga0439431_0097171 3300041997 Unclassified 807
77 Ga0439445_0143761 3300042004 Unclassified 692
78 Ga0450896_092042 3300042133 Bacteria 518
79 Ga0466972_0210141 3300044658 Bacteria 911
80 Ga0466968_0610613 3300044735 Bacteria 551
81 Ga0466960_0423319 3300044901 Bacteria 770
82 Ga0451576_0825879 3300045051 Bacteria 973
83 Ga0466967_1316335 3300045976 Bacteria 720
84 Ga0495592_0619367 3300046454 Unclassified 658
85 Ga0495629_0205778 3300046459 Bacteria 1360
86 Ga0495638_0070732 3300046460 Bacteria 2136
87 Ga0495613_0193862 3300046689 Unclassified 1435
88 Ga0495581_0507574 3300047315 Bacteria 701
89 Ga0495680_0059720 3300047322 Bacteria 2942
90 Ga0495686_0030236 3300047472 Bacteria 3519
91 Ga0496104_0931826 3300048907 Bacteria 773
92 Ga0496104_1067492 3300048907 Unclassified 711
93 Ga0496105_0517130 3300048908 Bacteria 935
94 Ga0496106_0367968 3300048909 Unclassified 1155
95 Ga0496112_0046638 3300048915 Bacteria 4251
96 Ga0496114_0446062 3300048917 Bacteria 1146
97 Ga0496115_0095284 3300048918 Bacteria 2436
98 Ga0496115_0228924 3300048918 Bacteria 1533
99 Ga0501305_072055 3300049161 Unclassified 609
100 Ga0501311_003439 3300049527 Bacteria 1613
101 Ga0501034_0463276 3300049571 Bacteria 1184
102 Ga0501039_0273924 3300049575 Bacteria 1327
103 Ga0501068_0090077 3300049584 Bacteria 1892
104 Ga0501069_0106872 3300049585 Unclassified 1591
105 Ga0501069_0149758 3300049585 Bacteria 1340
106 Ga0501070_0000007 3300049586 Bacteria 219869
107 Ga0501074_0077462 3300049590 Bacteria 2386
108 Ga0501079_0166427 3300049741 Unclassified 1720
109 Ga0501080_0032214 3300049742 Bacteria 4887
110 Ga0501081_1208165 3300049743 Unclassified 573
111 Ga0501083_0004349 3300049744 Bacteria 9977
112 nmdc:mga09592_557911_c1 3300050508 Bacteria 983
113 nmdc:mga06r32_1046227_c1 3300050510 Bacteria 767
114 nmdc:mga0rr50_1121348_c1 3300050513 Unclassified 669
115 Ga0500635_0155194 3300053080 Bacteria 875
116 Ga0500566_0001920 3300053094 Bacteria 12226
117 Ga0500554_170978 3300053102 Bacteria 732
118 Ga0500585_083976 3300053144 Unclassified 1151
119 Ga0500603_084660 3300053150 Unclassified 923
120 Ga0501082_0582936 3300060353 Unclassified 978
121 Ga0068871_100797559
122 Ga0070689_100001995
123 Ga0070689_100517659
124 Ga0070689_101392988
125 Ga0070668_100758650
126 Ga0070688_100107698
127 Ga0070685_10618919
128 Ga0070698_100715349
129 Ga0070698_100771208
130 Ga0070686_100530117
131 Ga0070665_101819966
132 Ga0068855_100390287
133 Ga0068855_100553965
134 Ga0068855_102080670
135 Ga0068864_100848310
136 Ga0068864_101424198
137 Ga0068860_101316920
138 Ga0070717_10000320
139 Ga0070717_10002218
140 Ga0070717_10038961
141 Ga0070717_10181746
142 Ga0075428_101895424
143 Ga0075429_100843164
144 Ga0075435_100903226
145 Ga0105247_10013486
146 Ga0105248_11108336
147 Ga0157374_10207773
148 Ga0157378_10067509
149 Ga0163163_11123430
150 Ga0157377_10522786
151 Ga0157376_11400209
152 Ga0206352_11121731
153 Ga0207710_10006759
154 Ga0207707_10376810
155 Ga0207646_10090831
156 Ga0207670_10000238
157 Ga0207670_10728332
158 Ga0207670_11143799
159 Ga0207667_10482885
160 Ga0207678_10277571
161 Ga0265337_1002159
162 Ga0265334_10062275
163 Ga0265332_10032905
164 Ga0265320_10000096
165 Ga0307509_10000026
166 Ga0307509_10179921
167 Ga0307514_10190966
168 Ga0265314_10022513
169 Ga0307516_10270888
170 Ga0307406_10018731
171 Ga0307406_10028234
172 Ga0307406_10479387
173 Ga0307412_10020301
174 Ga0307416_101386016
175 Ga0307415_100197220
176 Ga0307415_101348533
177 Ga0373923_0018925
178 Ga0373957_0172149
179 Ga0373943_0021851
180 Ga0373943_0301348
181 Ga0373946_0291500
182 Ga0373955_0414623
183 Ga0373935_0091735
184 Ga0373935_0092995
185 Ga0373927_0101726
186 Ga0373937_0108448
187 Ga0373937_0228243
188 Ga0373925_0141494
189 Ga0373925_0182431
190 Ga0395905_0049950
191 Ga0436365_1804534
192 Ga0439436_0190603
193 Ga0451807_1554657
194 Ga0451851_0029887
195 Ga0451853_0696096
196 Ga0439431_0097171
197 Ga0439445_0143761
198 Ga0450896_092042
199 Ga0466972_0210141
200 Ga0466968_0610613
201 Ga0466960_0423319
202 Ga0451576_0825879
203 Ga0466967_1316335
204 Ga0495592_0619367
205 Ga0495629_0205778
206 Ga0495638_0070732
207 Ga0495613_0193862
208 Ga0495581_0507574
209 Ga0495680_0059720
210 Ga0495686_0030236
211 Ga0496104_0931826
212 Ga0496104_1067492
213 Ga0496105_0517130
214 Ga0496106_0367968
215 Ga0496112_0046638
216 Ga0496114_0446062
217 Ga0496115_0095284
218 Ga0496115_0228924
219 Ga0501305_072055
220 Ga0501311_003439
221 Ga0501034_0463276
222 Ga0501039_0273924
223 Ga0501068_0090077
224 Ga0501069_0106872
225 Ga0501069_0149758
226 Ga0501070_0000007
227 Ga0501074_0077462
228 Ga0501079_0166427
229 Ga0501080_0032214
230 Ga0501081_1208165
231 Ga0501083_0004349
232 nmdc:mga09592_557911_c1
233 nmdc:mga06r32_1046227_c1
234 nmdc:mga0rr50_1121348_c1
235 Ga0500635_0155194
236 Ga0500566_0001920
237 Ga0500554_170978
238 Ga0500585_083976
239 Ga0500603_084660
240 Ga0501082_0582936

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00582

Usp

Universal stress protein family

16

155

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fh0-assembly1.cif.gz_A crystal structure of putative universal stress protein kpn_01444 - atpase 0.8108 2 139
3fh0-assembly1.cif.gz_B crystal structure of putative universal stress protein kpn_01444 - atpase 0.8031 1 139
3fh0-assembly1.cif.gz_B crystal structure of putative universal stress protein kpn_01444 - atpase 0.7973 1 139
3fh0-assembly1.cif.gz_A crystal structure of putative universal stress protein kpn_01444 - atpase 0.7931 2 139
4r2m-assembly1.cif.gz_A-2 crystal structure of r134d mutant of ynaf (universal stress protein f) from salmonella typhimurium 0.7869 1 139
ID Description Score Start End Superfamily
3fh0B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8146 2 139 3.40.50.620
3fh0B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8085 2 139 3.40.50.620
4r2lB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7851 1 139 3.40.50.620
4r2lB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7799 1 139 3.40.50.620
af_Q2FWH7_221_384_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7751 2 141 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A4P2R3F0-F1-model_v4 Universal stress protein 0.9064 2 144 GO:0005737
AF-A0A150RKC9-F1-model_v4 UspA domain-containing protein 0.9041 2 144
AF-A0A4P2R3F0-F1-model_v4 Universal stress protein 0.8825 2 144 GO:0005737
AF-A0A1M3NCT6-F1-model_v4 Universal stress protein 0.8821 1 146 GO:0005737
AF-A0A150RKC9-F1-model_v4 UspA domain-containing protein 0.8806 2 144

Map