F104684

General Info

Members Datasets Scaffolds Average Seq Length
120 75 240 351

Family's Representative Sequence

Representative Sequence 3300005343|Ga0070687_100066355|Ga0070687_1000663552
Length 390
Sequence VGLFPEFSIKIGDFQRDRQIFFDILFFWNEIAAVVLYFIMSIENKKNKFVTLLLKWNREKNTRTMPWKGEKDPYKIWISEIILQQTRVEQGLDYYKRFIKTFPDINKLAKTSDQKVMKMWEGLGYYSRCRNLLSTARTISKNFRGKFPDTYDSIKSLKGIGSYTASAISSFAFNLPHAVVDGNVYRVLSRVFGIKTAVDTTEGKKYFNTLAEELLDKKQPGIYNQAIMDFGATVCKPVSPECNRCYLKKHCYAFTNDVINELPVKEKKVTVRKRWFYYMVIQYKKEVLIRQRIDKDIWLHLYEFPVIEMKKKLPLSQIKKLVEKIGTSSKNISISSLYTQQLSHQKINAFFIRINLKERNSFKSGSWITHTQLKQFAFPGIIRNFLEEFI

Samples

Sample ID Description Type Environment
1 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
26 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
38 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
54 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
60 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
61 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
62 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
63 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
64 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
71 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
73 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
74 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
75 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.33
Nodule 0
Rhizoplane 0
Rhizosphere 95.83
Stem 0
Stem Tuber 0
Unclassified 5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070687_100066355 3300005343 Bacteria 1922
2 Ga0070658_10019175 3300005327 Bacteria 5479
3 Ga0070658_10051253 3300005327 Bacteria 3345
4 Ga0070683_100195489 3300005329 Bacteria 1920
5 Ga0070670_100043902 3300005331 Bacteria 3843
6 Ga0070670_100197564 3300005331 Bacteria 1747
7 Ga0068869_100289033 3300005334 Bacteria 1320
8 Ga0070680_100082909 3300005336 Bacteria 2648
9 Ga0070669_100260191 3300005353 Bacteria 1384
10 Ga0070673_100187546 3300005364 Bacteria 1774
11 Ga0070679_100004260 3300005530 Bacteria 13202
12 Ga0070679_100016150 3300005530 Bacteria 7194
13 Ga0070684_100332459 3300005535 Bacteria 1396
14 Ga0068853_100049431 3300005539 Bacteria 3614
15 Ga0068855_100003319 3300005563 Bacteria 19687
16 Ga0070664_100329211 3300005564 Bacteria 1385
17 Ga0068857_100383860 3300005577 Unclassified 1305
18 Ga0068856_100520065 3300005614 Bacteria 1211
19 Ga0068852_100068403 3300005616 Bacteria 3108
20 Ga0068864_100004986 3300005618 Bacteria 10879
21 Ga0068861_100118169 3300005719 Bacteria 2135
22 Ga0075366_10020477 3300006195 Unclassified 3839
23 Ga0075366_10125134 3300006195 Bacteria 1550
24 Ga0068871_100297612 3300006358 Bacteria 1415
25 Ga0105240_10290145 3300009093 Bacteria 1876
26 Ga0105242_10290870 3300009176 Bacteria 1487
27 Ga0105242_10337216 3300009176 Bacteria 1388
28 Ga0105237_10143716 3300009545 Bacteria 2380
29 Ga0105249_10003557 3300009553 Bacteria 13478
30 Ga0105246_10250957 3300011119 Bacteria 1404
31 Ga0157373_10030311 3300013100 Bacteria 3892
32 Ga0157371_10000662 3300013102 Bacteria 40921
33 Ga0157371_10004891 3300013102 Bacteria 11511
34 Ga0157371_10005059 3300013102 Bacteria 11267
35 Ga0157371_10008115 3300013102 Bacteria 8388
36 Ga0157371_10062214 3300013102 Bacteria 2646
37 Ga0157371_10095250 3300013102 Bacteria 2110
38 Ga0157371_10101156 3300013102 Bacteria 2045
39 Ga0157370_10003869 3300013104 Bacteria 17438
40 Ga0157370_10007533 3300013104 Bacteria 11826
41 Ga0157370_10066938 3300013104 Bacteria 3396
42 Ga0157369_10130841 3300013105 Bacteria 2659
43 Ga0163162_10130217 3300013306 Unclassified 2624
44 Ga0163162_10433447 3300013306 Bacteria 1447
45 Ga0157372_10008937 3300013307 Bacteria 10647
46 Ga0157372_10015257 3300013307 Bacteria 8229
47 Ga0157372_10071339 3300013307 Bacteria 3912
48 Ga0157372_10101250 3300013307 Bacteria 3288
49 Ga0157372_10339272 3300013307 Bacteria 1750
50 Ga0157372_10352735 3300013307 Bacteria 1714
51 Ga0157372_10404050 3300013307 Bacteria 1591
52 Ga0157375_10495104 3300013308 Bacteria 1387
53 Ga0163163_10002448 3300014325 Bacteria 15695
54 Ga0163163_10120924 3300014325 Bacteria 2652
55 Ga0163163_10233029 3300014325 Bacteria 1891
56 Ga0157380_10387082 3300014326 Bacteria 1322
57 Ga0157379_10438092 3300014968 Bacteria 1205
58 Ga0157376_10535977 3300014969 Bacteria 1156
59 Ga0163161_10228052 3300017792 Bacteria 1445
60 Ga0207705_10045910 3300025909 Bacteria 3139
61 Ga0207662_10092406 3300025918 Bacteria 1863
62 Ga0207652_10000051 3300025921 Bacteria 120327
63 Ga0207652_10030829 3300025921 Bacteria 4495
64 Ga0207650_10001888 3300025925 Bacteria 14799
65 Ga0207650_10010645 3300025925 Bacteria 6317
66 Ga0207650_10161520 3300025925 Bacteria 1775
67 Ga0207644_10160697 3300025931 Bacteria 1746
68 Ga0207665_10362207 3300025939 Bacteria 1097
69 Ga0207691_10284633 3300025940 Bacteria 1422
70 Ga0207679_10232893 3300025945 Bacteria 1556
71 Ga0207667_10018024 3300025949 Bacteria 7930
72 Ga0207651_10019937 3300025960 Bacteria 4034
73 Ga0207712_10003318 3300025961 Bacteria 10201
74 Ga0207677_10024554 3300026023 Bacteria 3746
75 Ga0207639_10035540 3300026041 Bacteria 3688
76 Ga0207648_10044722 3300026089 Bacteria 3885
77 Ga0207648_10062192 3300026089 Bacteria 3255
78 Ga0207698_10007788 3300026142 Bacteria 6732
79 Ga0265323_10000668 3300028653 Bacteria 18669
80 Ga0265316_10001972 3300031344 Bacteria 21591
81 Ga0265316_10016200 3300031344 Bacteria 6476
82 Ga0395899_0004497 3300037312 Bacteria 10868
83 Ga0395899_0029088 3300037312 Bacteria 4155
84 Ga0395900_0007792 3300037418 Bacteria 11044
85 Ga0395900_0103382 3300037418 Unclassified 2926
86 Ga0395898_0001339 3300037466 Bacteria 35580
87 Ga0395898_0204447 3300037466 Bacteria 1884
88 Ga0395898_0303653 3300037466 Bacteria 1522
89 Ga0395905_0017380 3300037471 Bacteria 6829
90 Ga0395905_0223788 3300037471 Bacteria 1761
91 Ga0395901_0001308 3300038443 Bacteria 26259
92 Ga0395901_0289981 3300038443 Bacteria 1698
93 Ga0439466_0082824 3300041411 Unclassified 1011
94 Ga0439465_0038218 3300041413 Bacteria 1546
95 Ga0451855_0210528 3300041511 Bacteria 1356
96 Ga0439449_0011806 3300042007 Bacteria 3285
97 Ga0439434_0008423 3300042435 Bacteria 3022
98 Ga0451577_0000010 3300042876 Bacteria 616686
99 Ga0451577_0036446 3300042876 Bacteria 4427
100 Ga0451577_0040362 3300042876 Bacteria 4190
101 Ga0453683_0000111 3300044673 Bacteria 122663
102 Ga0453683_0013350 3300044673 Bacteria 5367
103 Ga0453683_0013567 3300044673 Bacteria 5313
104 Ga0453684_0000130 3300044712 Bacteria 331761
105 Ga0453684_0035485 3300044712 Bacteria 6890
106 Ga0453684_0038841 3300044712 Bacteria 6496
107 Ga0453684_0107015 3300044712 Bacteria 3406
108 Ga0453684_0454543 3300044712 Bacteria 1425
109 Ga0466959_0012222 3300045049 Bacteria 6196
110 Ga0451576_0000353 3300045051 Bacteria 110215
111 Ga0451576_0005715 3300045051 Bacteria 15507
112 Ga0451576_0007838 3300045051 Bacteria 12653
113 Ga0451576_0009479 3300045051 Bacteria 11286
114 Ga0451576_0099489 3300045051 Bacteria 3025
115 Ga0495686_0031938 3300047472 Bacteria 3410
116 Ga0501034_0015398 3300049571 Bacteria 7860
117 Ga0501221_024839 3300049704 Unclassified 1206
118 Ga0501035_0240970 3300049822 Bacteria 1538
119 nmdc:mga0k408_3285_c1 3300050493 Bacteria 8559
120 Ga0500646_0001109 3300053090 Bacteria 7315
121 Ga0070687_100066355
122 Ga0070658_10019175
123 Ga0070658_10051253
124 Ga0070683_100195489
125 Ga0070670_100043902
126 Ga0070670_100197564
127 Ga0068869_100289033
128 Ga0070680_100082909
129 Ga0070669_100260191
130 Ga0070673_100187546
131 Ga0070679_100004260
132 Ga0070679_100016150
133 Ga0070684_100332459
134 Ga0068853_100049431
135 Ga0068855_100003319
136 Ga0070664_100329211
137 Ga0068857_100383860
138 Ga0068856_100520065
139 Ga0068852_100068403
140 Ga0068864_100004986
141 Ga0068861_100118169
142 Ga0075366_10020477
143 Ga0075366_10125134
144 Ga0068871_100297612
145 Ga0105240_10290145
146 Ga0105242_10290870
147 Ga0105242_10337216
148 Ga0105237_10143716
149 Ga0105249_10003557
150 Ga0105246_10250957
151 Ga0157373_10030311
152 Ga0157371_10000662
153 Ga0157371_10004891
154 Ga0157371_10005059
155 Ga0157371_10008115
156 Ga0157371_10062214
157 Ga0157371_10095250
158 Ga0157371_10101156
159 Ga0157370_10003869
160 Ga0157370_10007533
161 Ga0157370_10066938
162 Ga0157369_10130841
163 Ga0163162_10130217
164 Ga0163162_10433447
165 Ga0157372_10008937
166 Ga0157372_10015257
167 Ga0157372_10071339
168 Ga0157372_10101250
169 Ga0157372_10339272
170 Ga0157372_10352735
171 Ga0157372_10404050
172 Ga0157375_10495104
173 Ga0163163_10002448
174 Ga0163163_10120924
175 Ga0163163_10233029
176 Ga0157380_10387082
177 Ga0157379_10438092
178 Ga0157376_10535977
179 Ga0163161_10228052
180 Ga0207705_10045910
181 Ga0207662_10092406
182 Ga0207652_10000051
183 Ga0207652_10030829
184 Ga0207650_10001888
185 Ga0207650_10010645
186 Ga0207650_10161520
187 Ga0207644_10160697
188 Ga0207665_10362207
189 Ga0207691_10284633
190 Ga0207679_10232893
191 Ga0207667_10018024
192 Ga0207651_10019937
193 Ga0207712_10003318
194 Ga0207677_10024554
195 Ga0207639_10035540
196 Ga0207648_10044722
197 Ga0207648_10062192
198 Ga0207698_10007788
199 Ga0265323_10000668
200 Ga0265316_10001972
201 Ga0265316_10016200
202 Ga0395899_0004497
203 Ga0395899_0029088
204 Ga0395900_0007792
205 Ga0395900_0103382
206 Ga0395898_0001339
207 Ga0395898_0204447
208 Ga0395898_0303653
209 Ga0395905_0017380
210 Ga0395905_0223788
211 Ga0395901_0001308
212 Ga0395901_0289981
213 Ga0439466_0082824
214 Ga0439465_0038218
215 Ga0451855_0210528
216 Ga0439449_0011806
217 Ga0439434_0008423
218 Ga0451577_0000010
219 Ga0451577_0036446
220 Ga0451577_0040362
221 Ga0453683_0000111
222 Ga0453683_0013350
223 Ga0453683_0013567
224 Ga0453684_0000130
225 Ga0453684_0035485
226 Ga0453684_0038841
227 Ga0453684_0107015
228 Ga0453684_0454543
229 Ga0466959_0012222
230 Ga0451576_0000353
231 Ga0451576_0005715
232 Ga0451576_0007838
233 Ga0451576_0009479
234 Ga0451576_0099489
235 Ga0495686_0031938
236 Ga0501034_0015398
237 Ga0501221_024839
238 Ga0501035_0240970
239 nmdc:mga0k408_3285_c1
240 Ga0500646_0001109

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00633

HHH

Helix-hairpin-helix motif

142

171

0.92

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

78

217

0.92

PF14815

NUDIX_4

NUDIX domain

277

388

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kn9-assembly1.cif.gz_A muty n-terminal domain in complex with dna containing an intrahelical oxog:a base-pair 0.9465 1 201
5kn8-assembly1.cif.gz_A muty n-terminal domain in complex with undamaged dna 0.9438 1 201
1muy-assembly1.cif.gz_A-2 catalytic domain of muty from escherichia coli 0.9418 2 204
1kg7-assembly1.cif.gz_A crystal structure of the e161a mutant of e.coli muty (core fragment) 0.9388 2 198
1wef-assembly1.cif.gz_A catalytic domain of muty from escherichia coli k20a mutant 0.9374 2 204
ID Description Score Start End Superfamily
1rrqA02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9533 1 110 1.10.340.30
1kg2A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9489 2 111 1.10.340.30
af_A0A1D6IX31_1_95_1.10.1670.10 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.9426 19 111 1.10.1670.10
af_P9WQ09_31_141_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.934 1 109 1.10.340.30
1rrqA02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9289 1 110 1.10.340.30
ID Description Score Start End GO Terms
AF-A0A2A5XIF3-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.972 1 111 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051536
AF-A0A6M8WDL7-F1-model_v4 HhH-GPD domain-containing protein 0.9682 8 105 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051536
AF-A0A7C2RCT4-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9676 1 190 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A353Y599-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9669 20 130 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051536
AF-A0A132H0Q8-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9638 1 327 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539

Map