F103704

General Info

Members Datasets Scaffolds Average Seq Length
119 81 118 389

Family's Representative Sequence

Representative Sequence 3300054114|Ga0501084_0055033|Ga0501084_0055033_1890_3248
Length 452
Sequence MAQKSLSSNSSDAVVSAKGAARARSGHLWIYRSDVTRKPQAENGSVVRVVDHRGRFVARAHYGKESEITLRIISKDDVETTRDFWLARLRAAARWRERVVRDTDAYRLVHAEGDLLPGLIIDRYGDCFALQTLTRGMEALKAMWTDLLVEEFHPRLIVERNDAKVRQLEGLPMINSLLYPAAGQTTWERRRPCLPTSVSRSLPETPQASMPALPGGLTVPVQAADEENKDKPPVWPTAADDLFITENGIRFRIDLFEGQKTGAFLDQRENRAAAMRYARGRGLDCFSFHGWFALHMAKGCERVTAVDISEPAIEIARRNAELNDVTNVEFVAANAFDLLRDYDDAGERFDTIVLDPPAFAKNRGAVEAALRGYKEINLRALRLLNPGGVLITCSCSYHVGEELFLDVLAEAARDAGRAVQIVEKRAQSRDHPILLTVPETYYLKCVVARVMD

Samples

Sample ID Description Type Environment
1 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
2 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
49 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
50 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
51 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
52 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
53 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
54 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
55 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
56 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
57 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
58 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
59 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
60 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
67 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
68 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
69 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
70 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
73 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
74 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
75 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
76 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
77 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
78 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
79 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
80 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
81 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.52
Nodule 0
Rhizoplane 3.36
Rhizosphere 72.27
Stem 0
Stem Tuber 0
Unclassified 21.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070660_100114222 3300005339 Bacteria 2151
2 Ga0070659_100037667 3300005366 Bacteria 3771
3 Ga0070714_100117800 3300005435 Unclassified 2359
4 Ga0070694_100004015 3300005444 Bacteria 8812
5 Ga0070663_100034585 3300005455 Bacteria 3501
6 Ga0070678_100072418 3300005456 Bacteria 2583
7 Ga0070681_10064211 3300005458 Bacteria 3643
8 Ga0070707_100002114 3300005468 Bacteria 19031
9 Ga0068853_100064336 3300005539 Bacteria 3180
10 Ga0070665_100094467 3300005548 Bacteria 2995
11 Ga0068855_100022143 3300005563 Bacteria 7616
12 Ga0068855_100095676 3300005563 Bacteria 3423
13 Ga0070664_100039183 3300005564 Bacteria 3992
14 Ga0068856_100009288 3300005614 Bacteria 9552
15 Ga0068856_100054392 3300005614 Bacteria 3948
16 Ga0068859_100149525 3300005617 Bacteria 2411
17 Ga0068858_100045675 3300005842 Bacteria 4060
18 Ga0068862_100012512 3300005844 Bacteria 7023
19 Ga0081455_10001532 3300005937 Bacteria 28467
20 Ga0081539_10001214 3300005985 Bacteria 46206
21 Ga0070717_10171606 3300006028 Bacteria 1886
22 Ga0075428_100012897 3300006844 Bacteria 9297
23 Ga0075428_100327252 3300006844 Bacteria 1646
24 Ga0075431_100011295 3300006847 Bacteria 8996
25 Ga0075431_100032170 3300006847 Bacteria 5405
26 Ga0075431_100104739 3300006847 Bacteria 2919
27 Ga0075433_10040484 3300006852 Bacteria 4034
28 Ga0097620_100149524 3300006931 Bacteria 2411
29 Ga0105240_10247712 3300009093 Bacteria 2062
30 Ga0105240_10312400 3300009093 Bacteria 1794
31 Ga0114129_10090409 3300009147 Bacteria 4244
32 Ga0114129_10259993 3300009147 Bacteria 2327
33 Ga0105241_10056259 3300009174 Bacteria 3016
34 Ga0105238_10170343 3300009551 Bacteria 2153
35 Ga0157373_10051001 3300013100 Bacteria 2947
36 Ga0157373_10072796 3300013100 Bacteria 2425
37 Ga0157371_10036727 3300013102 Bacteria 3508
38 Ga0157370_10118878 3300013104 Bacteria 2468
39 Ga0157369_10028937 3300013105 Bacteria 6128
40 Ga0157369_10030781 3300013105 Bacteria 5917
41 Ga0157374_10071898 3300013296 Bacteria 3263
42 Ga0213872_10000832 3300021361 Bacteria 22383
43 Ga0213876_10000870 3300021384 Bacteria 20212
44 Ga0213876_10034269 3300021384 Bacteria 2677
45 Ga0213875_10000010 3300021388 Bacteria 370268
46 Ga0213875_10004986 3300021388 Bacteria 7200
47 Ga0213875_10009579 3300021388 Bacteria 4898
48 Ga0213875_10019892 3300021388 Unclassified 3225
49 Ga0213875_10026117 3300021388 Bacteria 2780
50 Ga0213875_10039751 3300021388 Unclassified 2216
51 Ga0213875_10087515 3300021388 Bacteria 1453
52 Ga0207707_10131034 3300025912 Bacteria 2193
53 Ga0207693_10288129 3300025915 Unclassified 1287
54 Ga0207646_10000197 3300025922 Bacteria 81795
55 Ga0207681_10012471 3300025923 Bacteria 5245
56 Ga0207664_10094463 3300025929 Bacteria 2458
57 Ga0207664_10144539 3300025929 Unclassified 2016
58 Ga0207690_10024355 3300025932 Bacteria 3791
59 Ga0207667_10023815 3300025949 Bacteria 6738
60 Ga0207658_10250515 3300025986 Bacteria 1505
61 Ga0207703_10017266 3300026035 Bacteria 5632
62 Ga0207702_10007111 3300026078 Bacteria 9575
63 Ga0207702_10023809 3300026078 Bacteria 5080
64 Ga0207683_10126784 3300026121 Unclassified 2294
65 Ga0268266_10152045 3300028379 Bacteria 2087
66 Ga0436364_0141856 3300037853 Unclassified 4200
67 Ga0436364_0191019 3300037853 Bacteria 6467
68 Ga0436364_0280035 3300037853 Unclassified 4780
69 Ga0436364_0414813 3300037853 Bacteria 101115
70 Ga0436364_0516649 3300037853 Bacteria 2073
71 Ga0436364_0590278 3300037853 Bacteria 85826
72 Ga0436364_0859758 3300037853 Bacteria 6924
73 Ga0436364_0883683 3300037853 Bacteria 14743
74 Ga0436364_0928446 3300037853 Bacteria 2235
75 Ga0436364_0997615 3300037853 Bacteria 4777
76 Ga0436364_1235519 3300037853 Unclassified 2438
77 Ga0436364_1299144 3300037853 Unclassified 1292
78 Ga0436364_1340603 3300037853 Bacteria 3525
79 Ga0436364_1376749 3300037853 Bacteria 3790
80 Ga0436364_1545220 3300037853 Bacteria 1830
81 Ga0436365_1016855 3300039437 Bacteria 42338
82 Ga0436361_0524841 3300039447 Bacteria 8180
83 Ga0436363_0989028 3300039450 Bacteria 5121
84 Ga0436362_0131735 3300039453 Unclassified 2269
85 Ga0439435_0005771 3300042436 Bacteria 2744
86 Ga0451577_0031438 3300042876 Bacteria 4789
87 Ga0453684_0398576 3300044712 Bacteria 1542
88 Ga0496109_0000014 3300048912 Bacteria 223246
89 Ga0496112_0002293 3300048915 Bacteria 15312
90 Ga0496113_0086914 3300048916 Bacteria 2403
91 Ga0496115_0011170 3300048918 Bacteria 6727
92 Ga0501032_0040174 3300049569 Bacteria 3181
93 Ga0501034_0208828 3300049571 Bacteria 1908
94 Ga0501038_0237849 3300049574 Bacteria 1447
95 Ga0501039_0084791 3300049575 Bacteria 2468
96 Ga0501041_0085185 3300049577 Bacteria 1948
97 Ga0501048_0073747 3300049582 Bacteria 2409
98 Ga0501070_0064547 3300049586 Bacteria 3032
99 Ga0501070_0100980 3300049586 Bacteria 2386
100 Ga0501072_0110524 3300049588 Bacteria 2188
101 Ga0501077_0139013 3300049593 Bacteria 1540
102 Ga0501079_0095468 3300049741 Bacteria 2304
103 Ga0501035_0049504 3300049822 Bacteria 3765
104 Ga0501044_0000950 3300049823 Bacteria 34772
105 Ga0501044_0082794 3300049823 Bacteria 3246
106 Ga0501045_0086747 3300049824 Bacteria 2310
107 nmdc:mga0k408_18023_c1 3300050493 Bacteria 3936
108 nmdc:mga05p37_166933_c1 3300050507 Bacteria 2686
109 nmdc:mga05p37_328327_c1 3300050507 Bacteria 1808
110 nmdc:mga06r32_116264_c1 3300050510 Bacteria 2635
111 nmdc:mga06r32_3670_c1 3300050510 Bacteria 13708
112 nmdc:mga06r32_90154_c1 3300050510 Bacteria 2995
113 nmdc:mga08y16_13531_c1 3300050511 Bacteria 8587
114 nmdc:mga0a205_56138_c1 3300050515 Bacteria 3803
115 Ga0500555_004858 3300053103 Bacteria 3814
116 Ga0500627_0092226 3300053158 Bacteria 1356
117 Ga0501084_0055033 3300054114 Bacteria 3329
118 Ga0530510_0009038 3300061734 Bacteria 6984

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005937 Ga0081455_10001532 Ga0081455_1000153214 331
2 3300005458 Ga0070681_10064211 Ga0070681_100642112 349
3 3300005614 Ga0068856_100009288 Ga0068856_1000092882 349
4 3300025912 Ga0207707_10131034 Ga0207707_101310342 349
5 3300026078 Ga0207702_10007111 Ga0207702_100071113 349
6 3300009093 Ga0105240_10247712 Ga0105240_102477122 354
7 3300005937 Ga0081455_10001532 Ga0081455_1000153215 358
8 3300042876 Ga0451577_0031438 Ga0451577_0031438_1009_2172 364
9 3300049574 Ga0501038_0237849 Ga0501038_0237849_290_1387 365
10 3300049582 Ga0501048_0073747 Ga0501048_0073747_859_1956 365
11 3300050493 nmdc:mga0k408_18023_c1 nmdc:mga0k408_18023_c1_1582_2739 365
12 3300025922 Ga0207646_10000197 Ga0207646_1000019752 367
13 3300049575 Ga0501039_0084791 Ga0501039_0084791_419_1531 370
14 3300049577 Ga0501041_0085185 Ga0501041_0085185_292_1404 370
15 3300049588 Ga0501072_0110524 Ga0501072_0110524_380_1492 370
16 3300049593 Ga0501077_0139013 Ga0501077_0139013_352_1464 370
17 3300049741 Ga0501079_0095468 Ga0501079_0095468_84_1196 370
18 3300049824 Ga0501045_0086747 Ga0501045_0086747_47_1159 370
19 3300061734 Ga0530510_0009038 Ga0530510_0009038_5398_6510 370
20 3300006844 Ga0075428_100012897 Ga0075428_1000128976 372
21 3300006847 Ga0075431_100032170 Ga0075431_1000321702 372
22 3300025986 Ga0207658_10250515 Ga0207658_102505152 374
23 3300037853 Ga0436364_0141856 Ga0436364_0141856_567_1736 374
24 3300049569 Ga0501032_0040174 Ga0501032_0040174_541_1710 377
25 3300049586 Ga0501070_0064547 Ga0501070_0064547_1467_2636 377
26 3300049823 Ga0501044_0000950 Ga0501044_0000950_31442_32611 377
27 3300021388 Ga0213875_10009579 Ga0213875_100095791 378
28 3300037853 Ga0436364_0414813 Ga0436364_0414813_3706_4875 378
29 3300005842 Ga0068858_100045675 Ga0068858_1000456753 380
30 3300009093 Ga0105240_10312400 Ga0105240_103124001 380
31 3300009551 Ga0105238_10170343 Ga0105238_101703432 380
32 3300026035 Ga0207703_10017266 Ga0207703_100172663 380
33 3300028379 Ga0268266_10152045 Ga0268266_101520452 380
34 3300005366 Ga0070659_100037667 Ga0070659_1000376672 381
35 3300005455 Ga0070663_100034585 Ga0070663_1000345852 381
36 3300005456 Ga0070678_100072418 Ga0070678_1000724182 381
37 3300005539 Ga0068853_100064336 Ga0068853_1000643362 381
38 3300009174 Ga0105241_10056259 Ga0105241_100562592 381
39 3300013100 Ga0157373_10051001 Ga0157373_100510012 381
40 3300013100 Ga0157373_10072796 Ga0157373_100727962 381
41 3300013102 Ga0157371_10036727 Ga0157371_100367272 381
42 3300013105 Ga0157369_10028937 Ga0157369_100289372 381
43 3300013105 Ga0157369_10030781 Ga0157369_100307814 381
44 3300013296 Ga0157374_10071898 Ga0157374_100718982 381
45 3300026121 Ga0207683_10126784 Ga0207683_101267842 381
46 3300048915 Ga0496112_0002293 Ga0496112_0002293_10027_11172 381
47 3300048916 Ga0496113_0086914 Ga0496113_0086914_138_1283 381
48 3300048918 Ga0496115_0011170 Ga0496115_0011170_1538_2683 381
49 3300048912 Ga0496109_0000014 Ga0496109_0000014_199212_200372 382
50 3300037853 Ga0436364_0516649 Ga0436364_0516649_826_1977 383
51 3300039450 Ga0436363_0989028 Ga0436363_0989028_471_1622 383
52 3300009147 Ga0114129_10090409 Ga0114129_100904094 385
53 3300050507 nmdc:mga05p37_166933_c1 nmdc:mga05p37_166933_c1_560_1720 385
54 3300050510 nmdc:mga06r32_90154_c1 nmdc:mga06r32_90154_c1_115_1275 385
55 3300053103 Ga0500555_004858 Ga0500555_004858_2393_3628 385
56 3300053158 Ga0500627_0092226 Ga0500627_0092226_51_1286 385
57 3300021361 Ga0213872_10000832 Ga0213872_100008322 386
58 3300021388 Ga0213875_10039751 Ga0213875_100397512 386
59 3300037853 Ga0436364_0280035 Ga0436364_0280035_2479_3639 386
60 3300037853 Ga0436364_1235519 Ga0436364_1235519_1110_2270 386
61 3300042436 Ga0439435_0005771 Ga0439435_0005771_1303_2472 386
62 3300044712 Ga0453684_0398576 Ga0453684_0398576_164_1324 386
63 3300049823 Ga0501044_0082794 Ga0501044_0082794_2050_3210 386
64 3300005435 Ga0070714_100117800 Ga0070714_1001178002 389
65 3300006028 Ga0070717_10171606 Ga0070717_101716062 389
66 3300013104 Ga0157370_10118878 Ga0157370_101188782 389
67 3300021384 Ga0213876_10000870 Ga0213876_1000087010 389
68 3300021384 Ga0213876_10034269 Ga0213876_100342692 389
69 3300021388 Ga0213875_10000010 Ga0213875_10000010218 389
70 3300021388 Ga0213875_10004986 Ga0213875_100049865 389
71 3300021388 Ga0213875_10019892 Ga0213875_100198922 389
72 3300021388 Ga0213875_10087515 Ga0213875_100875151 389
73 3300025929 Ga0207664_10094463 Ga0207664_100944632 389
74 3300025929 Ga0207664_10144539 Ga0207664_101445391 389
75 3300037853 Ga0436364_0590278 Ga0436364_0590278_14236_15405 389
76 3300037853 Ga0436364_0859758 Ga0436364_0859758_5558_6727 389
77 3300037853 Ga0436364_0883683 Ga0436364_0883683_5521_6702 389
78 3300037853 Ga0436364_0928446 Ga0436364_0928446_23_1192 389
79 3300037853 Ga0436364_1299144 Ga0436364_1299144_82_1251 389
80 3300037853 Ga0436364_1340603 Ga0436364_1340603_911_2080 389
81 3300037853 Ga0436364_1376749 Ga0436364_1376749_1683_2852 389
82 3300037853 Ga0436364_1545220 Ga0436364_1545220_132_1301 389
83 3300039437 Ga0436365_1016855 Ga0436365_1016855_26972_28141 389
84 3300039447 Ga0436361_0524841 Ga0436361_0524841_4324_5493 389
85 3300039453 Ga0436362_0131735 Ga0436362_0131735_920_2089 389
86 3300049571 Ga0501034_0208828 Ga0501034_0208828_683_1855 389
87 3300049586 Ga0501070_0100980 Ga0501070_0100980_291_1463 389
88 3300049822 Ga0501035_0049504 Ga0501035_0049504_2145_3317 389
89 3300025915 Ga0207693_10288129 Ga0207693_102881291 390
90 3300037853 Ga0436364_0997615 Ga0436364_0997615_1010_2182 390
91 3300005468 Ga0070707_100002114 Ga0070707_1000021147 391
92 3300021388 Ga0213875_10026117 Ga0213875_100261172 391
93 3300037853 Ga0436364_0191019 Ga0436364_0191019_4195_5370 391
94 3300005617 Ga0068859_100149525 Ga0068859_1001495252 392
95 3300006931 Ga0097620_100149524 Ga0097620_1001495242 392
96 3300006844 Ga0075428_100327252 Ga0075428_1003272522 395
97 3300006847 Ga0075431_100104739 Ga0075431_1001047392 395
98 3300006852 Ga0075433_10040484 Ga0075433_100404843 395
99 3300009147 Ga0114129_10259993 Ga0114129_102599932 395
100 3300050507 nmdc:mga05p37_328327_c1 nmdc:mga05p37_328327_c1_252_1523 395
101 3300050510 nmdc:mga06r32_116264_c1 nmdc:mga06r32_116264_c1_978_2249 395
102 3300050511 nmdc:mga08y16_13531_c1 nmdc:mga08y16_13531_c1_5431_6702 395
103 3300050515 nmdc:mga0a205_56138_c1 nmdc:mga0a205_56138_c1_325_1596 395
104 3300054114 Ga0501084_0055033 Ga0501084_0055033_1890_3248 395
105 3300005985 Ga0081539_10001214 Ga0081539_1000121428 396
106 3300005444 Ga0070694_100004015 Ga0070694_1000040155 397
107 3300005844 Ga0068862_100012512 Ga0068862_1000125122 397
108 3300006847 Ga0075431_100011295 Ga0075431_1000112957 397
109 3300025923 Ga0207681_10012471 Ga0207681_100124713 397
110 3300050510 nmdc:mga06r32_3670_c1 nmdc:mga06r32_3670_c1_1645_2859 397
111 3300005339 Ga0070660_100114222 Ga0070660_1001142222 400
112 3300005548 Ga0070665_100094467 Ga0070665_1000944672 400
113 3300005563 Ga0068855_100022143 Ga0068855_1000221433 400
114 3300005563 Ga0068855_100095676 Ga0068855_1000956762 400
115 3300005564 Ga0070664_100039183 Ga0070664_1000391832 400
116 3300005614 Ga0068856_100054392 Ga0068856_1000543922 400
117 3300025932 Ga0207690_10024355 Ga0207690_100243552 400
118 3300025949 Ga0207667_10023815 Ga0207667_100238153 400
119 3300026078 Ga0207702_10023809 Ga0207702_100238093 400

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17785

PUA_3

PUA-like domain

14

75

0.96

PF09445

Methyltransf_15

RNA cap guanine-N2 methyltransferase

279

360

0.95

PF10672

Methyltrans_SAM

S-adenosylmethionine-dependent methyltransferase

200

431

0.88

PF03602

Cons_hypoth95

Conserved hypothetical protein 95

270

399

0.83

PF05958

tRNA_U5-meth_tr

tRNA (Uracil-5-)-methyltransferase

272

366

0.83

PF08241

Methyltransf_11

Methyltransferase domain

283

392

0.82

PF13649

Methyltransf_25

Methyltransferase domain

283

388

0.8

PF05175

MTS

Methyltransferase small domain

270

415

0.77

PF13847

Methyltransf_31

Methyltransferase domain

277

434

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c0k-assembly1.cif.gz_B crystal structure of a ribosomal rna methyltranferase 0.9532 18 400
2cww-assembly1.cif.gz_A-2 crystal structure of thermus thermophilus ttha1280, a putative sam-dependent rna methyltransferase, in complex with s-adenosyl-l-homocysteine 0.9503 17 400
4dmg-assembly1.cif.gz_B thermus thermophilus m5c1942 methyltransferase rlmo 0.948 11 399
2as0-assembly1.cif.gz_B crystal structure of ph1915 (apc 5817): a hypothetical rna methyltransferase 0.9478 17 399
2cww-assembly1.cif.gz_A-2 crystal structure of thermus thermophilus ttha1280, a putative sam-dependent rna methyltransferase, in complex with s-adenosyl-l-homocysteine 0.9454 17 400
ID Description Score Start End Superfamily
af_Q8I4W7_220_326_3.30.750.80 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;RNA methyltransferase domain (HRMD) like 0.9916 110 189 3.30.750.80
af_Q8IKX0_132_231_3.30.750.80 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;RNA methyltransferase domain (HRMD) like 0.976 84 182 3.30.750.80
af_A0A1D6H1M4_236_424_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9681 230 399 3.40.50.150
af_I1KW47_231_444_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9604 191 400 3.40.50.150
af_Q8IKX0_132_231_3.30.750.80 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;RNA methyltransferase domain (HRMD) like 0.957 84 182 3.30.750.80
ID Description Score Start End GO Terms
AF-A0A3N5X649-F1-model_v4 Methyltransferase domain-containing protein 0.9911 232 400 GO:0005737
GO:0008168
GO:0032259
AF-A0A1W9LI82-F1-model_v4 Uncharacterized protein 0.9876 17 400 GO:0000166
GO:0003723
GO:0005737
GO:0008168
GO:0032259
AF-A0A2V8R6Z2-F1-model_v4 Class I SAM-dependent rRNA methyltransferase 0.9874 17 400 GO:0003723
GO:0005737
GO:0008168
GO:0032259
AF-R6BR80-F1-model_v4 Hydrogenase-4 F subunit 0.9872 278 400 GO:0005737
GO:0008168
GO:0032259
AF-A0A7T9JK96-F1-model_v4 deleted 0.9853 16 400

Feature Viewer

pLDDT pTM Quality
91.58 0.87 High
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Predicted Structure (AlphaFold2)

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