F100638

General Info

Members Datasets Scaffolds Average Seq Length
119 78 238 298

Family's Representative Sequence

Representative Sequence 3300005444|Ga0070694_100122545|Ga0070694_1001225451
Length 324
Sequence MASATHPTSNVPASNLQTGARVALFGLVVNMLVASAKIIAGILGNAYVLIADGIESALDIAGSVIIWGGLKVAARPPDETHPYGHGKAEPIAAIVVAIGVLMAALGIAIQSVRELFLPHHAPAPFTLIKELLYRYVVRFGRDVESTALQTDAWHHRTDAMTSIAAFVGISISLIGGEAWQGADDWAALFACALIGTNGYRLLAPALHEIMDTAPRGEIVDLVRKAAASVPGVVELDKSFVRKMGISYYVDLHVKVDGSISVRDGHHIAHEVKRAIQQTDPRGSPTCSFTLNRRKQEICRGSGSLPMGRQRRPLQFFDQRDHRAR

Samples

Sample ID Description Type Environment
1 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
25 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
26 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
30 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
31 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
44 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
45 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
46 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
47 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
48 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
49 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
50 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
51 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
52 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
53 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
54 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
55 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
56 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
57 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
58 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
59 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
60 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
61 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
65 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
66 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
70 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
71 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
74 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
75 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
76 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.56
Rhizosphere 87.39
Stem 0
Stem Tuber 0
Unclassified 21.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070694_100122545 3300005444 Bacteria 1867
2 rootH2_10127919 3300003320 Bacteria 2764
3 rootL2_10059905 3300003322 Bacteria 3582
4 Ga0065712_10103493 3300005290 Unclassified 1983
5 Ga0070670_100002797 3300005331 Bacteria 14430
6 Ga0070668_100010665 3300005347 Bacteria 6831
7 Ga0070671_100030912 3300005355 Unclassified 4420
8 Ga0070673_100326208 3300005364 Bacteria 1357
9 Ga0070688_100004166 3300005365 Bacteria 7505
10 Ga0070667_100112896 3300005367 Bacteria 2358
11 Ga0070708_100015223 3300005445 Bacteria 6345
12 Ga0070708_100204608 3300005445 Unclassified 1849
13 Ga0070708_100219848 3300005445 Bacteria 1781
14 Ga0070708_100335880 3300005445 Bacteria 1424
15 Ga0070706_100011996 3300005467 Bacteria 8044
16 Ga0070706_100059269 3300005467 Unclassified 3533
17 Ga0070706_100111477 3300005467 Bacteria 2546
18 Ga0070707_100001846 3300005468 Bacteria 20341
19 Ga0070707_100068421 3300005468 Unclassified 3418
20 Ga0070707_100139369 3300005468 Unclassified 2360
21 Ga0070707_100203885 3300005468 Bacteria 1928
22 Ga0070698_100007993 3300005471 Bacteria 11437
23 Ga0070698_100016191 3300005471 Bacteria 7873
24 Ga0070698_100188080 3300005471 Bacteria 2002
25 Ga0070699_100070512 3300005518 Bacteria 3038
26 Ga0070699_100492370 3300005518 Unclassified 1113
27 Ga0070697_100000468 3300005536 Bacteria 30881
28 Ga0070697_100012562 3300005536 Bacteria 6635
29 Ga0070697_100035388 3300005536 Unclassified 4028
30 Ga0070697_100050842 3300005536 Bacteria 3365
31 Ga0070697_100085978 3300005536 Bacteria 2595
32 Ga0070697_100262468 3300005536 Bacteria 1479
33 Ga0070665_100104481 3300005548 Bacteria 2835
34 Ga0068851_10000281 3300005834 Bacteria 23434
35 Ga0081539_10057472 3300005985 Unclassified 2152
36 Ga0070717_10006568 3300006028 Bacteria 8568
37 Ga0070717_10031047 3300006028 Unclassified 4296
38 Ga0070717_10071238 3300006028 Bacteria 2899
39 Ga0070716_100401007 3300006173 Unclassified 986
40 Ga0068871_100022699 3300006358 Bacteria 4842
41 Ga0105240_10356869 3300009093 Bacteria 1657
42 Ga0157371_10015326 3300013102 Bacteria 5754
43 Ga0157374_10000026 3300013296 Bacteria 238236
44 Ga0157374_10003941 3300013296 Bacteria 12472
45 Ga0157378_10155336 3300013297 Unclassified 2135
46 Ga0157372_10003457 3300013307 Bacteria 17046
47 Ga0157375_10000805 3300013308 Bacteria 27544
48 Ga0157376_10000112 3300014969 Bacteria 58430
49 Ga0157376_10056124 3300014969 Bacteria 3289
50 Ga0213876_10008622 3300021384 Bacteria 5517
51 Ga0207697_10000010 3300025315 Bacteria 65144
52 Ga0207656_10000403 3300025321 Bacteria 14530
53 Ga0207684_10093725 3300025910 Bacteria 2561
54 Ga0207684_10161760 3300025910 Unclassified 1928
55 Ga0207684_10219672 3300025910 Bacteria 1640
56 Ga0207646_10002548 3300025922 Bacteria 21522
57 Ga0207646_10047855 3300025922 Unclassified 3834
58 Ga0207646_10099257 3300025922 Bacteria 2610
59 Ga0207646_10300022 3300025922 Bacteria 1451
60 Ga0207650_10057088 3300025925 Bacteria 2903
61 Ga0207700_10091274 3300025928 Unclassified 2406
62 Ga0207644_10214106 3300025931 Unclassified 1524
63 Ga0207691_10104126 3300025940 Bacteria 2530
64 Ga0207651_10107056 3300025960 Bacteria 2089
65 Ga0207703_10334909 3300026035 Bacteria 1389
66 Ga0268266_10077751 3300028379 Bacteria 2886
67 Ga0265338_10006968 3300028800 Bacteria 14204
68 Ga0265327_10003098 3300031251 Bacteria 16409
69 Ga0316575_10018575 3300031665 Bacteria 2652
70 Ga0316575_10043314 3300031665 Bacteria 1783
71 Ga0316575_10085438 3300031665 Unclassified 1274
72 Ga0316579_10044847 3300031691 Bacteria 2060
73 Ga0316576_10001372 3300031727 Bacteria 13007
74 Ga0316576_10002224 3300031727 Bacteria 10962
75 Ga0316576_10011225 3300031727 Bacteria 5858
76 Ga0316578_10091511 3300031728 Bacteria 1817
77 Ga0307405_10077425 3300031731 Bacteria 2161
78 Ga0316577_10003910 3300031733 Bacteria 7605
79 Ga0316577_10084129 3300031733 Bacteria 1780
80 Ga0316577_10097946 3300031733 Viruses 1643
81 Ga0307410_10158461 3300031852 Bacteria 1693
82 Ga0307406_10073749 3300031901 Bacteria 2245
83 Ga0307409_100035707 3300031995 Bacteria 3645
84 Ga0307411_10357216 3300032005 Bacteria 1193
85 Ga0307415_100352411 3300032126 Bacteria 1239
86 Ga0316583_10005542 3300032133 Bacteria 4531
87 Ga0316583_10009829 3300032133 Bacteria 3447
88 Ga0316580_10011408 3300032139 Bacteria 2698
89 Ga0316574_0020453 3300035398 Bacteria 3918
90 Ga0316574_0023369 3300035398 Bacteria 3690
91 Ga0316574_0051816 3300035398 Bacteria 2558
92 Ga0316574_0222857 3300035398 Unclassified 1208
93 Ga0373947_0082812 3300035725 Unclassified 1989
94 Ga0316582_0012028 3300036647 Bacteria 4814
95 Ga0316582_0086757 3300036647 Bacteria 2053
96 Ga0316582_0238126 3300036647 Bacteria 1246
97 Ga0316582_0324003 3300036647 Unclassified 1059
98 Ga0316584_0003560 3300036712 Bacteria 10168
99 Ga0316584_0181291 3300036712 Bacteria 1559
100 Ga0395899_0000155 3300037312 Bacteria 104055
101 Ga0395900_0695908 3300037418 Bacteria 950
102 Ga0395901_0072328 3300038443 Unclassified 3595
103 Ga0400490_46141 3300038726 Bacteria 64156
104 Ga0400489_73242 3300039093 Bacteria 31342
105 Ga0436365_1086612 3300039437 Bacteria 9700
106 Ga0451577_0000723 3300042876 Bacteria 51136
107 Ga0453684_0000033 3300044712 Bacteria 734012
108 Ga0495647_0155126 3300046681 Bacteria 984
109 Ga0496100_0262695 3300048903 Unclassified 1281
110 Ga0496101_0068093 3300048904 Unclassified 2602
111 Ga0496104_0393268 3300048907 Unclassified 1298
112 Ga0496105_0235486 3300048908 Unclassified 1487
113 Ga0496109_0032234 3300048912 Bacteria 4710
114 Ga0496110_0161415 3300048913 Bacteria 2032
115 Ga0496114_0035866 3300048917 Unclassified 4097
116 Ga0496115_0018537 3300048918 Bacteria 5346
117 Ga0496115_0094254 3300048918 Bacteria 2449
118 nmdc:mga08x19_199155_c1 3300050514 Bacteria 1372
119 nmdc:mga08x19_49526_c1 3300050514 Bacteria 2694
120 Ga0070694_100122545
121 rootH2_10127919
122 rootL2_10059905
123 Ga0065712_10103493
124 Ga0070670_100002797
125 Ga0070668_100010665
126 Ga0070671_100030912
127 Ga0070673_100326208
128 Ga0070688_100004166
129 Ga0070667_100112896
130 Ga0070708_100015223
131 Ga0070708_100204608
132 Ga0070708_100219848
133 Ga0070708_100335880
134 Ga0070706_100011996
135 Ga0070706_100059269
136 Ga0070706_100111477
137 Ga0070707_100001846
138 Ga0070707_100068421
139 Ga0070707_100139369
140 Ga0070707_100203885
141 Ga0070698_100007993
142 Ga0070698_100016191
143 Ga0070698_100188080
144 Ga0070699_100070512
145 Ga0070699_100492370
146 Ga0070697_100000468
147 Ga0070697_100012562
148 Ga0070697_100035388
149 Ga0070697_100050842
150 Ga0070697_100085978
151 Ga0070697_100262468
152 Ga0070665_100104481
153 Ga0068851_10000281
154 Ga0081539_10057472
155 Ga0070717_10006568
156 Ga0070717_10031047
157 Ga0070717_10071238
158 Ga0070716_100401007
159 Ga0068871_100022699
160 Ga0105240_10356869
161 Ga0157371_10015326
162 Ga0157374_10000026
163 Ga0157374_10003941
164 Ga0157378_10155336
165 Ga0157372_10003457
166 Ga0157375_10000805
167 Ga0157376_10000112
168 Ga0157376_10056124
169 Ga0213876_10008622
170 Ga0207697_10000010
171 Ga0207656_10000403
172 Ga0207684_10093725
173 Ga0207684_10161760
174 Ga0207684_10219672
175 Ga0207646_10002548
176 Ga0207646_10047855
177 Ga0207646_10099257
178 Ga0207646_10300022
179 Ga0207650_10057088
180 Ga0207700_10091274
181 Ga0207644_10214106
182 Ga0207691_10104126
183 Ga0207651_10107056
184 Ga0207703_10334909
185 Ga0268266_10077751
186 Ga0265338_10006968
187 Ga0265327_10003098
188 Ga0316575_10018575
189 Ga0316575_10043314
190 Ga0316575_10085438
191 Ga0316579_10044847
192 Ga0316576_10001372
193 Ga0316576_10002224
194 Ga0316576_10011225
195 Ga0316578_10091511
196 Ga0307405_10077425
197 Ga0316577_10003910
198 Ga0316577_10084129
199 Ga0316577_10097946
200 Ga0307410_10158461
201 Ga0307406_10073749
202 Ga0307409_100035707
203 Ga0307411_10357216
204 Ga0307415_100352411
205 Ga0316583_10005542
206 Ga0316583_10009829
207 Ga0316580_10011408
208 Ga0316574_0020453
209 Ga0316574_0023369
210 Ga0316574_0051816
211 Ga0316574_0222857
212 Ga0373947_0082812
213 Ga0316582_0012028
214 Ga0316582_0086757
215 Ga0316582_0238126
216 Ga0316582_0324003
217 Ga0316584_0003560
218 Ga0316584_0181291
219 Ga0395899_0000155
220 Ga0395900_0695908
221 Ga0395901_0072328
222 Ga0400490_46141
223 Ga0400489_73242
224 Ga0436365_1086612
225 Ga0451577_0000723
226 Ga0453684_0000033
227 Ga0495647_0155126
228 Ga0496100_0262695
229 Ga0496101_0068093
230 Ga0496104_0393268
231 Ga0496105_0235486
232 Ga0496109_0032234
233 Ga0496110_0161415
234 Ga0496114_0035866
235 Ga0496115_0018537
236 Ga0496115_0094254
237 nmdc:mga08x19_199155_c1
238 nmdc:mga08x19_49526_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16916

ZT_dimer

Dimerisation domain of Zinc Transporter

214

283

0.94

PF01545

Cation_efflux

Cation efflux family

23

210

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6han-assembly2.cif.gz_B mamm ctd h264e-e289h 0.9826 213 290
6h5v-assembly1.cif.gz_A mamm ctd h264e 0.9779 213 290
6h9q-assembly1.cif.gz_A-2 mamm ctd d249e - cadmium form 0.9778 213 290
3w8g-assembly1.cif.gz_A mamm v260r 0.9777 213 289
5hsp-assembly1.cif.gz_A-2 mamm ctd m250l 0.977 213 289
ID Description Score Start End Superfamily
af_Q10LJ2_305_379_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9929 214 287 3.30.70.1350
af_Q2FVK7_214_286_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9849 216 289 3.30.70.1350
af_K7K8J1_302_391_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.983 212 289 3.30.70.1350
af_Q10LJ2_305_379_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.967 214 287 3.30.70.1350
3w5yA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9667 212 290 3.30.70.1350
ID Description Score Start End GO Terms
AF-A0A430JBK1-F1-model_v4 Cation efflux protein cytoplasmic domain-containing protein 0.9622 220 290
AF-S7SQG1-F1-model_v4 Cobalt-zinc-cadmium resistance protein czcD 0.961 212 290
AF-A0A519Z9W3-F1-model_v4 Cation transporter 0.9517 8 172 GO:0005886
GO:0006882
GO:0015086
GO:0015093
GO:0015341
AF-A0A2G1C2C8-F1-model_v4 deleted 0.936 118 290
AF-A0A120I964-F1-model_v4 Transporter 0.9309 3 290 GO:0008324
GO:0016020

Map