F097698

General Info

Members Datasets Scaffolds Average Seq Length
118 98 236 141

Family's Representative Sequence

Representative Sequence 3300026023|Ga0207677_11069202|Ga0207677_110692021
Length 163
Sequence VEAWPEGRDAATESTVETVPYRPMRDDEVRAFLTALPARPAILGTVRVDGRPHVAPIWYAVDDDGAVLFTTGEATVKGRNLRRTGWAAMSVDDDAAPFSFVTLEGPVTISDDLAEVRRWAAVIGGRYMGADRADEYGQRNGVPGELVVRLTPEKVVSASDVAD

Samples

Sample ID Description Type Environment
1 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
6 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
7 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
9 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
10 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
13 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
14 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
23 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
28 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
29 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
30 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
31 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
32 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
33 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
34 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
35 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
36 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
37 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
38 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
39 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
40 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
41 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
42 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
43 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
44 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
45 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
46 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
47 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
48 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
49 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
50 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
51 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
52 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
53 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
54 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
55 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
56 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
57 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
58 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
59 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
60 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
61 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
62 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
63 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
64 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
65 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
66 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
67 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
68 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
69 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
70 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
71 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
72 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
73 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
74 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
81 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
82 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
83 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
84 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
85 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
86 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
88 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
89 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
92 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
93 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
94 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
95 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
96 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
97 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
98 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.31
Metatranscriptomes 0.85
Isolates 0.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.86
Nodule 0
Rhizoplane 14.41
Rhizosphere 68.64
Stem 0
Stem Tuber 0
Unclassified 9.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207677_11069202 3300026023 Unclassified 734
2 Ga0070690_100654938 3300005330 Bacteria 802
3 Ga0068868_100467005 3300005338 Bacteria 1100
4 Ga0070714_100388445 3300005435 Bacteria 1317
5 Ga0070714_101268989 3300005435 Bacteria 719
6 Ga0068857_100118934 3300005577 Bacteria 2378
7 Ga0068857_102431753 3300005577 Unclassified 514
8 Ga0068861_101086252 3300005719 Bacteria 768
9 Ga0081539_10009164 3300005985 Bacteria 8354
10 Ga0070717_11039437 3300006028 Bacteria 746
11 Ga0075365_10108519 3300006038 Bacteria 1906
12 Ga0075365_10157923 3300006038 Bacteria 1579
13 Ga0075365_10722637 3300006038 Bacteria 703
14 Ga0075368_10106640 3300006042 Bacteria 1153
15 Ga0075368_10224815 3300006042 Bacteria 798
16 Ga0075364_11123647 3300006051 Bacteria 533
17 Ga0070716_101150866 3300006173 Bacteria 621
18 Ga0070716_101153890 3300006173 Unclassified 620
19 Ga0075362_10459832 3300006177 Bacteria 647
20 Ga0075367_10025387 3300006178 Bacteria 3351
21 Ga0075367_10347771 3300006178 Bacteria 935
22 Ga0075367_10461702 3300006178 Bacteria 805
23 Ga0075428_102039718 3300006844 Bacteria 594
24 Ga0075430_100376635 3300006846 Bacteria 1172
25 Ga0075431_100100384 3300006847 Bacteria 2986
26 Ga0105251_10563906 3300009011 Bacteria 537
27 Ga0105245_10422992 3300009098 Bacteria 1336
28 Ga0157375_11366176 3300013308 Bacteria 834
29 Ga0163163_11165816 3300014325 Bacteria 833
30 Ga0182008_10216091 3300014497 Bacteria 980
31 Ga0207713_1250727 3300025735 Bacteria 522
32 Ga0207664_11044677 3300025929 Unclassified 731
33 Ga0207665_10895315 3300025939 Bacteria 704
34 Ga0207674_10305989 3300026116 Bacteria 1539
35 Ga0265338_10190665 3300028800 Bacteria 1554
36 Ga0265760_10172726 3300031090 Unclassified 718
37 Ga0265320_10079384 3300031240 Bacteria 1534
38 Ga0265327_10004060 3300031251 Bacteria 13261
39 Ga0316576_10333903 3300031727 Bacteria 1129
40 Ga0316578_10004266 3300031728 Bacteria 6715
41 Ga0373953_0227805 3300035117 Bacteria 808
42 Ga0373924_0384888 3300035410 Bacteria 626
43 Ga0373933_0025146 3300035724 Bacteria 3413
44 Ga0373937_0099248 3300036401 Bacteria 2701
45 Ga0373937_0293577 3300036401 Bacteria 1536
46 Ga0316584_0371883 3300036712 Bacteria 1023
47 Ga0373925_0651762 3300037068 Bacteria 868
48 Ga0436364_0710857 3300037853 Bacteria 542
49 Ga0395901_0504838 3300038443 Bacteria 1231
50 Ga0436365_0157509 3300039437 Bacteria 1254
51 Ga0436365_0308134 3300039437 Bacteria 27467
52 Ga0436362_1078556 3300039453 Bacteria 1166
53 Ga0436362_1282141 3300039453 Bacteria 1751
54 Ga0451793_1923117 3300041452 Bacteria 699
55 Ga0451855_0364578 3300041511 Unclassified 673
56 Ga0451853_3942928 3300041512 Bacteria 775
57 Ga0466963_0671324 3300044694 Bacteria 731
58 Ga0466967_0011945 3300045976 Bacteria 6616
59 Ga0495653_0263488 3300046463 Bacteria 1138
60 Ga0495608_0235766 3300046511 Bacteria 1144
61 Ga0495628_0966041 3300046516 Bacteria 588
62 Ga0495630_0537932 3300046517 Bacteria 896
63 Ga0495630_0957506 3300046517 Bacteria 651
64 Ga0495652_0313369 3300046529 Bacteria 1136
65 Ga0495587_0023340 3300046536 Bacteria 3801
66 Ga0495667_0029345 3300046559 Bacteria 3702
67 Ga0495668_0379793 3300046616 Bacteria 776
68 Ga0495657_0010897 3300046675 Bacteria 6819
69 Ga0495623_0585524 3300046679 Bacteria 581
70 Ga0495589_0388765 3300046794 Bacteria 641
71 Ga0495600_0899995 3300046809 Bacteria 522
72 Ga0495672_0132784 3300047320 Bacteria 1308
73 Ga0495680_0075275 3300047322 Bacteria 2561
74 Ga0495684_1091777 3300047471 Unclassified 501
75 Ga0495686_0005550 3300047472 Bacteria 9921
76 Ga0496100_0050751 3300048903 Unclassified 2689
77 Ga0496100_1310137 3300048903 Unclassified 572
78 Ga0496101_0001917 3300048904 Bacteria 12576
79 Ga0496101_0084107 3300048904 Bacteria 2356
80 Ga0496102_0034786 3300048905 Unclassified 4534
81 Ga0496104_0502672 3300048907 Bacteria 1123
82 Ga0496104_0656860 3300048907 Bacteria 957
83 Ga0496105_0005491 3300048908 Bacteria 9621
84 Ga0496106_0257805 3300048909 Bacteria 1395
85 Ga0496107_0452423 3300048910 Bacteria 954
86 Ga0496109_0109643 3300048912 Unclassified 2566
87 Ga0496109_0647237 3300048912 Bacteria 994
88 Ga0496112_0825960 3300048915 Bacteria 851
89 Ga0496114_0014308 3300048917 Bacteria 6365
90 Ga0496114_0261880 3300048917 Bacteria 1523
91 Ga0496115_0003577 3300048918 Bacteria 11174
92 Ga0501034_0001271 3300049571 Bacteria 34187
93 Ga0501039_0009402 3300049575 Bacteria 7451
94 Ga0501041_0004840 3300049577 Bacteria 7827
95 Ga0501046_0352088 3300049580 Bacteria 1069
96 Ga0501048_0265609 3300049582 Bacteria 1219
97 Ga0501068_0136136 3300049584 Bacteria 1538
98 Ga0501071_1013270 3300049587 Bacteria 641
99 Ga0501072_0015635 3300049588 Bacteria 5816
100 Ga0501074_0444750 3300049590 Bacteria 919
101 Ga0501077_0020461 3300049593 Bacteria 4189
102 Ga0501079_0010288 3300049741 Bacteria 7106
103 Ga0501035_0306526 3300049822 Bacteria 1337
104 Ga0501045_0870027 3300049824 Bacteria 662
105 nmdc:mga00v17_374092_c1 3300050491 Bacteria 926
106 nmdc:mga0yw44_194018_c1 3300050492 Bacteria 1340
107 nmdc:mga0yw44_246894_c1 3300050492 Bacteria 1187
108 nmdc:mga0yw44_55514_c2 3300050492 Bacteria 1663
109 nmdc:mga09592_1448197_c1 3300050508 Bacteria 560
110 nmdc:mga0qj67_443485_c1 3300050509 Bacteria 1046
111 Ga0495601_0061668 3300053077 Bacteria 2381
112 Ga0495655_0147422 3300053083 Bacteria 737
113 Ga0495595_0008852 3300053084 Bacteria 4146
114 Ga0495619_0102269 3300053085 Bacteria 1951
115 Ga0501084_0013824 3300054114 Bacteria 6682
116 Ga0501082_0054114 3300060353 Bacteria 3460
117 Ga0501082_0243315 3300060353 Bacteria 1566
118 2842891815 2842888712 Bacteria 4279094
119 Ga0207677_11069202
120 Ga0070690_100654938
121 Ga0068868_100467005
122 Ga0070714_100388445
123 Ga0070714_101268989
124 Ga0068857_100118934
125 Ga0068857_102431753
126 Ga0068861_101086252
127 Ga0081539_10009164
128 Ga0070717_11039437
129 Ga0075365_10108519
130 Ga0075365_10157923
131 Ga0075365_10722637
132 Ga0075368_10106640
133 Ga0075368_10224815
134 Ga0075364_11123647
135 Ga0070716_101150866
136 Ga0070716_101153890
137 Ga0075362_10459832
138 Ga0075367_10025387
139 Ga0075367_10347771
140 Ga0075367_10461702
141 Ga0075428_102039718
142 Ga0075430_100376635
143 Ga0075431_100100384
144 Ga0105251_10563906
145 Ga0105245_10422992
146 Ga0157375_11366176
147 Ga0163163_11165816
148 Ga0182008_10216091
149 Ga0207713_1250727
150 Ga0207664_11044677
151 Ga0207665_10895315
152 Ga0207674_10305989
153 Ga0265338_10190665
154 Ga0265760_10172726
155 Ga0265320_10079384
156 Ga0265327_10004060
157 Ga0316576_10333903
158 Ga0316578_10004266
159 Ga0373953_0227805
160 Ga0373924_0384888
161 Ga0373933_0025146
162 Ga0373937_0099248
163 Ga0373937_0293577
164 Ga0316584_0371883
165 Ga0373925_0651762
166 Ga0436364_0710857
167 Ga0395901_0504838
168 Ga0436365_0157509
169 Ga0436365_0308134
170 Ga0436362_1078556
171 Ga0436362_1282141
172 Ga0451793_1923117
173 Ga0451855_0364578
174 Ga0451853_3942928
175 Ga0466963_0671324
176 Ga0466967_0011945
177 Ga0495653_0263488
178 Ga0495608_0235766
179 Ga0495628_0966041
180 Ga0495630_0537932
181 Ga0495630_0957506
182 Ga0495652_0313369
183 Ga0495587_0023340
184 Ga0495667_0029345
185 Ga0495668_0379793
186 Ga0495657_0010897
187 Ga0495623_0585524
188 Ga0495589_0388765
189 Ga0495600_0899995
190 Ga0495672_0132784
191 Ga0495680_0075275
192 Ga0495684_1091777
193 Ga0495686_0005550
194 Ga0496100_0050751
195 Ga0496100_1310137
196 Ga0496101_0001917
197 Ga0496101_0084107
198 Ga0496102_0034786
199 Ga0496104_0502672
200 Ga0496104_0656860
201 Ga0496105_0005491
202 Ga0496106_0257805
203 Ga0496107_0452423
204 Ga0496109_0109643
205 Ga0496109_0647237
206 Ga0496112_0825960
207 Ga0496114_0014308
208 Ga0496114_0261880
209 Ga0496115_0003577
210 Ga0501034_0001271
211 Ga0501039_0009402
212 Ga0501041_0004840
213 Ga0501046_0352088
214 Ga0501048_0265609
215 Ga0501068_0136136
216 Ga0501071_1013270
217 Ga0501072_0015635
218 Ga0501074_0444750
219 Ga0501077_0020461
220 Ga0501079_0010288
221 Ga0501035_0306526
222 Ga0501045_0870027
223 nmdc:mga00v17_374092_c1
224 nmdc:mga0yw44_194018_c1
225 nmdc:mga0yw44_246894_c1
226 nmdc:mga0yw44_55514_c2
227 nmdc:mga09592_1448197_c1
228 nmdc:mga0qj67_443485_c1
229 Ga0495601_0061668
230 Ga0495655_0147422
231 Ga0495595_0008852
232 Ga0495619_0102269
233 Ga0501084_0013824
234 Ga0501082_0054114
235 Ga0501082_0243315
236 2842891815

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

25

114

0.93

PF12900

Pyridox_ox_2

Pyridoxamine 5'-phosphate oxidase

25

157

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
1rfe-assembly1.cif.gz_A crystal structure of conserved hypothetical protein rv2991 from mycobacterium tuberculosis 0.8682 6 139
1wv4-assembly1.cif.gz_B x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase in tetragonal crystal form 0.8548 22 96
5jab-assembly1.cif.gz_B structure of the biliverdin reductase rv2074 from mycobacterium tuberculosis in complex with f420 0.847 5 145
1wv4-assembly1.cif.gz_A x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase in tetragonal crystal form 0.8451 22 137
5jab-assembly1.cif.gz_B structure of the biliverdin reductase rv2074 from mycobacterium tuberculosis in complex with f420 0.8409 5 145
ID Description Score Start End Superfamily
1rfeA01 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.868 6 139 2.30.110.10
af_O53240_10_156_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8578 6 139 2.30.110.10
1wv4B00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8548 22 96 2.30.110.10
2htiA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8248 6 137 2.30.110.10
2asfA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.811 7 145 2.30.110.10
ID Description Score Start End GO Terms
AF-V6KZW5-F1-model_v4 Pyridoxamine 5'-phosphate oxidase putative domain-containing protein 0.9895 3 145 GO:0004222
AF-A0A1A2PMQ3-F1-model_v4 F420-dependent protein 0.986 25 145 GO:0005829
GO:0016627
GO:0070967
AF-A0A5N8XJZ7-F1-model_v4 PPOX class F420-dependent oxidoreductase 0.9833 3 145 GO:0005829
GO:0016627
GO:0070967
AF-A0A2T0KGN3-F1-model_v4 PPOX class probable F420-dependent enzyme 0.983 3 145 GO:0005829
GO:0016627
GO:0070967
AF-A0A3M2L8V6-F1-model_v4 PPOX class F420-dependent oxidoreductase 0.9808 7 145 GO:0005829
GO:0016627
GO:0070967

Map