F097207
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 118 | 83 | 118 | 186 |
Family's Representative Sequence
| Representative Sequence | 3300009177|Ga0105248_10531520|Ga0105248_105315202 |
| Length | 219 |
| Sequence | MRVRSPCKYWICLLTLSILSLFLLKPDLWRERRANTGEEMSVMISMLRGVNVGGNNKIKMTELKALYESLGFTDVQTYIQSGNVVFKSSAKDSATLGKKIGTAIEKKCGFCPEVIVRTPEELREVIARNPFSKRKDIEPGKLLVMFLAADPGAAARKTLKSVEAPVEEIKPLGKEIYIYFPDGQGQSKLKFAQIDKAINKTAWTGRNWNTVLKLAEMCD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003841 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 2 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 4 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 5 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 16 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 17 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 20 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 25 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 26 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 27 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 28 | 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Metagenome | Rhizosphere |
| 29 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 40 | 3300024225 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 | Metagenome | Rhizosphere |
| 41 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 42 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300030878 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 57 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 58 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 59 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 60 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 61 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 62 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 63 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 64 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 65 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 66 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 67 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 68 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 69 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 79 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 80 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 81 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 82 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 83 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.31 |
| Metatranscriptomes | 1.69 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.69 |
| Nodule | 0 |
| Rhizoplane | 2.54 |
| Rhizosphere | 91.53 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.24 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0055541_1001452 | 3300003841 | Bacteria | 5146 |
| 2 | Ga0065715_10461251 | 3300005293 | Unclassified | 816 |
| 3 | Ga0070680_100068735 | 3300005336 | Unclassified | 2908 |
| 4 | Ga0068868_100472253 | 3300005338 | Unclassified | 1094 |
| 5 | Ga0070669_100462595 | 3300005353 | Bacteria | 1047 |
| 6 | Ga0070709_11050969 | 3300005434 | Unclassified | 649 |
| 7 | Ga0070714_100106931 | 3300005435 | Bacteria | 2472 |
| 8 | Ga0070714_100323979 | 3300005435 | Bacteria | 1442 |
| 9 | Ga0070711_100020619 | 3300005439 | Bacteria | 4252 |
| 10 | Ga0070711_100620485 | 3300005439 | Unclassified | 904 |
| 11 | Ga0070708_100001421 | 3300005445 | Bacteria | 18273 |
| 12 | Ga0070708_100051568 | 3300005445 | Bacteria | 3646 |
| 13 | Ga0070708_100117337 | 3300005445 | Bacteria | 2451 |
| 14 | Ga0070706_100004180 | 3300005467 | Bacteria | 14020 |
| 15 | Ga0070706_100187220 | 3300005467 | Bacteria | 1934 |
| 16 | Ga0070706_100293356 | 3300005467 | Bacteria | 1517 |
| 17 | Ga0070706_100307835 | 3300005467 | Bacteria | 1478 |
| 18 | Ga0070707_100193773 | 3300005468 | Unclassified | 1981 |
| 19 | Ga0070698_100002582 | 3300005471 | Bacteria | 19939 |
| 20 | Ga0070698_100005766 | 3300005471 | Bacteria | 13541 |
| 21 | Ga0070699_100000688 | 3300005518 | Bacteria | 31515 |
| 22 | Ga0070699_100625525 | 3300005518 | Bacteria | 982 |
| 23 | Ga0070697_100009304 | 3300005536 | Bacteria | 7680 |
| 24 | Ga0070697_100229249 | 3300005536 | Bacteria | 1584 |
| 25 | Ga0070697_100351090 | 3300005536 | Bacteria | 1274 |
| 26 | Ga0068853_100576767 | 3300005539 | Bacteria | 1067 |
| 27 | Ga0070686_100730402 | 3300005544 | Unclassified | 792 |
| 28 | Ga0070696_100100081 | 3300005546 | Unclassified | 2076 |
| 29 | Ga0070665_100137949 | 3300005548 | Bacteria | 2442 |
| 30 | Ga0068858_100044144 | 3300005842 | Bacteria | 4133 |
| 31 | Ga0070717_10138568 | 3300006028 | Bacteria | 2097 |
| 32 | Ga0070717_10194761 | 3300006028 | Bacteria | 1772 |
| 33 | Ga0070716_100023342 | 3300006173 | Bacteria | 3279 |
| 34 | Ga0070716_100050971 | 3300006173 | Unclassified | 2351 |
| 35 | Ga0070712_100023047 | 3300006175 | Bacteria | 4107 |
| 36 | Ga0097621_100634788 | 3300006237 | Bacteria | 979 |
| 37 | Ga0075431_100753708 | 3300006847 | Unclassified | 949 |
| 38 | Ga0075434_100639590 | 3300006871 | Bacteria | 1082 |
| 39 | Ga0075436_100008974 | 3300006914 | Bacteria | 6843 |
| 40 | Ga0099794_10018359 | 3300007265 | Bacteria | 3135 |
| 41 | Ga0099794_10021964 | 3300007265 | Bacteria | 2905 |
| 42 | Ga0099794_10160409 | 3300007265 | Bacteria | 1144 |
| 43 | Ga0099794_10303553 | 3300007265 | Unclassified | 827 |
| 44 | Ga0099795_10010681 | 3300007788 | Bacteria | 2714 |
| 45 | Ga0105240_10193621 | 3300009093 | Bacteria | 2389 |
| 46 | Ga0105240_10229845 | 3300009093 | Bacteria | 2156 |
| 47 | Ga0105245_10036802 | 3300009098 | Bacteria | 4349 |
| 48 | Ga0105243_10226753 | 3300009148 | Bacteria | 1655 |
| 49 | Ga0105248_10012185 | 3300009177 | Bacteria | 9485 |
| 50 | Ga0105248_10531520 | 3300009177 | Bacteria | 1326 |
| 51 | Ga0105237_10124933 | 3300009545 | Unclassified | 2567 |
| 52 | Ga0105239_10156679 | 3300010375 | Bacteria | 2543 |
| 53 | Ga0157378_10014474 | 3300013297 | Archaea | 6906 |
| 54 | Ga0163162_10371066 | 3300013306 | Unclassified | 1564 |
| 55 | Ga0157375_10188589 | 3300013308 | Unclassified | 2216 |
| 56 | Ga0163163_10073025 | 3300014325 | Bacteria | 3421 |
| 57 | Ga0163163_10152777 | 3300014325 | Bacteria | 2352 |
| 58 | Ga0213875_10000005 | 3300021388 | Bacteria | 595146 |
| 59 | Ga0224572_1000130 | 3300024225 | Bacteria | 6241 |
| 60 | Ga0209566_100190 | 3300025225 | Bacteria | 64865 |
| 61 | Ga0207685_10222902 | 3300025905 | Bacteria | 898 |
| 62 | Ga0207684_10011737 | 3300025910 | Bacteria | 7642 |
| 63 | Ga0207684_10158843 | 3300025910 | Bacteria | 1946 |
| 64 | Ga0207654_10629485 | 3300025911 | Unclassified | 767 |
| 65 | Ga0207695_10189187 | 3300025913 | Bacteria | 1976 |
| 66 | Ga0207695_10396780 | 3300025913 | Bacteria | 1264 |
| 67 | Ga0207671_10118350 | 3300025914 | Bacteria | 2023 |
| 68 | Ga0207693_10064932 | 3300025915 | Bacteria | 2859 |
| 69 | Ga0207693_10118555 | 3300025915 | Bacteria | 2078 |
| 70 | Ga0207693_10135193 | 3300025915 | Bacteria | 1938 |
| 71 | Ga0207663_10470254 | 3300025916 | Bacteria | 972 |
| 72 | Ga0207646_10048605 | 3300025922 | Bacteria | 3802 |
| 73 | Ga0207687_10246726 | 3300025927 | Unclassified | 1417 |
| 74 | Ga0207700_10639067 | 3300025928 | Bacteria | 948 |
| 75 | Ga0207665_10083955 | 3300025939 | Bacteria | 2197 |
| 76 | Ga0207665_10105777 | 3300025939 | Bacteria | 1971 |
| 77 | Ga0207665_10209301 | 3300025939 | Unclassified | 1424 |
| 78 | Ga0207665_10226613 | 3300025939 | Unclassified | 1372 |
| 79 | Ga0207703_10533983 | 3300026035 | Unclassified | 1105 |
| 80 | Ga0209588_1039563 | 3300027671 | Bacteria | 1520 |
| 81 | Ga0209588_1067848 | 3300027671 | Bacteria | 1152 |
| 82 | Ga0268266_10040425 | 3300028379 | Bacteria | 3975 |
| 83 | Ga0265770_1013207 | 3300030878 | Unclassified | 1232 |
| 84 | Ga0265760_10004593 | 3300031090 | Bacteria | 3957 |
| 85 | Ga0373934_0024341 | 3300035086 | Bacteria | 2341 |
| 86 | Ga0373957_0136740 | 3300035120 | Bacteria | 1000 |
| 87 | Ga0373935_0077549 | 3300035692 | Bacteria | 2154 |
| 88 | Ga0373927_0188647 | 3300035695 | Unclassified | 1352 |
| 89 | Ga0373947_0056796 | 3300035725 | Bacteria | 2367 |
| 90 | Ga0373937_0019203 | 3300036401 | Bacteria | 6119 |
| 91 | Ga0373937_0127533 | 3300036401 | Bacteria | 2374 |
| 92 | Ga0373925_0229516 | 3300037068 | Unclassified | 1484 |
| 93 | Ga0436364_0157811 | 3300037853 | Bacteria | 430293 |
| 94 | Ga0436364_0331690 | 3300037853 | Bacteria | 1712 |
| 95 | Ga0436364_1032849 | 3300037853 | Bacteria | 3332 |
| 96 | Ga0439434_0011115 | 3300042435 | Unclassified | 2659 |
| 97 | Ga0451577_0905155 | 3300042876 | Bacteria | 794 |
| 98 | Ga0453684_0000344 | 3300044712 | Bacteria | 192860 |
| 99 | Ga0453684_0013661 | 3300044712 | Bacteria | 13155 |
| 100 | Ga0453684_0074477 | 3300044712 | Bacteria | 4274 |
| 101 | Ga0495651_0529836 | 3300046462 | Bacteria | 751 |
| 102 | Ga0495580_0197735 | 3300046472 | Bacteria | 1386 |
| 103 | Ga0495667_0279922 | 3300046559 | Bacteria | 1059 |
| 104 | Ga0495667_0471002 | 3300046559 | Bacteria | 788 |
| 105 | Ga0495623_0102148 | 3300046679 | Bacteria | 1746 |
| 106 | Ga0495669_0114133 | 3300046684 | Bacteria | 1263 |
| 107 | Ga0495604_0080524 | 3300047317 | Bacteria | 2440 |
| 108 | Ga0495674_0139163 | 3300047319 | Bacteria | 2041 |
| 109 | Ga0495677_0123482 | 3300047445 | Bacteria | 988 |
| 110 | Ga0495684_0018587 | 3300047471 | Bacteria | 5355 |
| 111 | Ga0496109_0476806 | 3300048912 | Unclassified | 1178 |
| 112 | Ga0496112_0332837 | 3300048915 | Unclassified | 1462 |
| 113 | Ga0496112_0794984 | 3300048915 | Bacteria | 871 |
| 114 | Ga0496125_0181087 | 3300048928 | Bacteria | 1404 |
| 115 | Ga0501034_0062880 | 3300049571 | Bacteria | 3727 |
| 116 | nmdc:mga0n895_1464159_c1 | 3300050512 | Unclassified | 650 |
| 117 | nmdc:mga0n895_641976_c1 | 3300050512 | Bacteria | 1061 |
| 118 | nmdc:mga08x19_15988_c1 | 3300050514 | Bacteria | 4571 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300050512 | nmdc:mga0n895_1464159_c1 | nmdc:mga0n895_1464159_c1_24_518 | 160 |
| 2 | 3300006028 | Ga0070717_10138568 | Ga0070717_101385682 | 163 |
| 3 | 3300005434 | Ga0070709_11050969 | Ga0070709_110509691 | 168 |
| 4 | 3300005439 | Ga0070711_100620485 | Ga0070711_1006204851 | 172 |
| 5 | 3300005353 | Ga0070669_100462595 | Ga0070669_1004625952 | 174 |
| 6 | 3300009148 | Ga0105243_10226753 | Ga0105243_102267531 | 174 |
| 7 | 3300048928 | Ga0496125_0181087 | Ga0496125_0181087_300_830 | 174 |
| 8 | 3300005445 | Ga0070708_100001421 | Ga0070708_10000142111 | 175 |
| 9 | 3300005467 | Ga0070706_100004180 | Ga0070706_10000418011 | 175 |
| 10 | 3300005467 | Ga0070706_100307835 | Ga0070706_1003078353 | 175 |
| 11 | 3300005468 | Ga0070707_100193773 | Ga0070707_1001937733 | 175 |
| 12 | 3300005471 | Ga0070698_100002582 | Ga0070698_10000258212 | 175 |
| 13 | 3300005518 | Ga0070699_100000688 | Ga0070699_10000068815 | 175 |
| 14 | 3300005536 | Ga0070697_100009304 | Ga0070697_1000093043 | 175 |
| 15 | 3300005546 | Ga0070696_100100081 | Ga0070696_1001000812 | 175 |
| 16 | 3300025910 | Ga0207684_10011737 | Ga0207684_100117375 | 175 |
| 17 | 3300025911 | Ga0207654_10629485 | Ga0207654_106294851 | 175 |
| 18 | 3300025922 | Ga0207646_10048605 | Ga0207646_100486055 | 175 |
| 19 | 3300044712 | Ga0453684_0000344 | Ga0453684_0000344_23222_23758 | 175 |
| 20 | 3300044712 | Ga0453684_0013661 | Ga0453684_0013661_9804_10340 | 175 |
| 21 | 3300044712 | Ga0453684_0074477 | Ga0453684_0074477_1658_2194 | 175 |
| 22 | 3300009177 | Ga0105248_10531520 | Ga0105248_105315202 | 176 |
| 23 | 3300014325 | Ga0163163_10073025 | Ga0163163_100730252 | 176 |
| 24 | 3300042435 | Ga0439434_0011115 | Ga0439434_0011115_1930_2502 | 176 |
| 25 | 3300046684 | Ga0495669_0114133 | Ga0495669_0114133_10_669 | 176 |
| 26 | 3300047445 | Ga0495677_0123482 | Ga0495677_0123482_16_558 | 176 |
| 27 | 3300049571 | Ga0501034_0062880 | Ga0501034_0062880_179_733 | 178 |
| 28 | 3300005336 | Ga0070680_100068735 | Ga0070680_1000687352 | 179 |
| 29 | 3300037853 | Ga0436364_0331690 | Ga0436364_0331690_22_573 | 179 |
| 30 | 3300005293 | Ga0065715_10461251 | Ga0065715_104612512 | 180 |
| 31 | 3300005338 | Ga0068868_100472253 | Ga0068868_1004722532 | 180 |
| 32 | 3300005435 | Ga0070714_100106931 | Ga0070714_1001069312 | 180 |
| 33 | 3300005435 | Ga0070714_100323979 | Ga0070714_1003239792 | 180 |
| 34 | 3300005439 | Ga0070711_100020619 | Ga0070711_1000206195 | 180 |
| 35 | 3300005445 | Ga0070708_100051568 | Ga0070708_1000515682 | 180 |
| 36 | 3300005445 | Ga0070708_100117337 | Ga0070708_1001173372 | 180 |
| 37 | 3300005467 | Ga0070706_100187220 | Ga0070706_1001872202 | 180 |
| 38 | 3300005467 | Ga0070706_100293356 | Ga0070706_1002933562 | 180 |
| 39 | 3300005471 | Ga0070698_100005766 | Ga0070698_1000057663 | 180 |
| 40 | 3300005518 | Ga0070699_100625525 | Ga0070699_1006255251 | 180 |
| 41 | 3300005536 | Ga0070697_100229249 | Ga0070697_1002292492 | 180 |
| 42 | 3300005536 | Ga0070697_100351090 | Ga0070697_1003510902 | 180 |
| 43 | 3300005539 | Ga0068853_100576767 | Ga0068853_1005767671 | 180 |
| 44 | 3300005544 | Ga0070686_100730402 | Ga0070686_1007304021 | 180 |
| 45 | 3300005548 | Ga0070665_100137949 | Ga0070665_1001379492 | 180 |
| 46 | 3300005842 | Ga0068858_100044144 | Ga0068858_1000441443 | 180 |
| 47 | 3300006028 | Ga0070717_10194761 | Ga0070717_101947612 | 180 |
| 48 | 3300006173 | Ga0070716_100023342 | Ga0070716_1000233423 | 180 |
| 49 | 3300006173 | Ga0070716_100050971 | Ga0070716_1000509713 | 180 |
| 50 | 3300006175 | Ga0070712_100023047 | Ga0070712_1000230475 | 180 |
| 51 | 3300006237 | Ga0097621_100634788 | Ga0097621_1006347882 | 180 |
| 52 | 3300006847 | Ga0075431_100753708 | Ga0075431_1007537082 | 180 |
| 53 | 3300006871 | Ga0075434_100639590 | Ga0075434_1006395902 | 180 |
| 54 | 3300006914 | Ga0075436_100008974 | Ga0075436_1000089744 | 180 |
| 55 | 3300007265 | Ga0099794_10018359 | Ga0099794_100183593 | 180 |
| 56 | 3300007265 | Ga0099794_10021964 | Ga0099794_100219645 | 180 |
| 57 | 3300007265 | Ga0099794_10160409 | Ga0099794_101604092 | 180 |
| 58 | 3300007265 | Ga0099794_10303553 | Ga0099794_103035532 | 180 |
| 59 | 3300007788 | Ga0099795_10010681 | Ga0099795_100106813 | 180 |
| 60 | 3300009093 | Ga0105240_10193621 | Ga0105240_101936212 | 180 |
| 61 | 3300009093 | Ga0105240_10229845 | Ga0105240_102298452 | 180 |
| 62 | 3300009098 | Ga0105245_10036802 | Ga0105245_100368026 | 180 |
| 63 | 3300009177 | Ga0105248_10012185 | Ga0105248_100121858 | 180 |
| 64 | 3300009545 | Ga0105237_10124933 | Ga0105237_101249333 | 180 |
| 65 | 3300010375 | Ga0105239_10156679 | Ga0105239_101566792 | 180 |
| 66 | 3300013297 | Ga0157378_10014474 | Ga0157378_100144742 | 180 |
| 67 | 3300013306 | Ga0163162_10371066 | Ga0163162_103710661 | 180 |
| 68 | 3300013308 | Ga0157375_10188589 | Ga0157375_101885892 | 180 |
| 69 | 3300014325 | Ga0163163_10152777 | Ga0163163_101527774 | 180 |
| 70 | 3300021388 | Ga0213875_10000005 | Ga0213875_10000005195 | 180 |
| 71 | 3300024225 | Ga0224572_1000130 | Ga0224572_10001302 | 180 |
| 72 | 3300025905 | Ga0207685_10222902 | Ga0207685_102229021 | 180 |
| 73 | 3300025910 | Ga0207684_10158843 | Ga0207684_101588432 | 180 |
| 74 | 3300025913 | Ga0207695_10189187 | Ga0207695_101891872 | 180 |
| 75 | 3300025913 | Ga0207695_10396780 | Ga0207695_103967802 | 180 |
| 76 | 3300025914 | Ga0207671_10118350 | Ga0207671_101183502 | 180 |
| 77 | 3300025915 | Ga0207693_10064932 | Ga0207693_100649322 | 180 |
| 78 | 3300025915 | Ga0207693_10118555 | Ga0207693_101185552 | 180 |
| 79 | 3300025915 | Ga0207693_10135193 | Ga0207693_101351932 | 180 |
| 80 | 3300025916 | Ga0207663_10470254 | Ga0207663_104702542 | 180 |
| 81 | 3300025927 | Ga0207687_10246726 | Ga0207687_102467261 | 180 |
| 82 | 3300025928 | Ga0207700_10639067 | Ga0207700_106390671 | 180 |
| 83 | 3300025939 | Ga0207665_10083955 | Ga0207665_100839552 | 180 |
| 84 | 3300025939 | Ga0207665_10105777 | Ga0207665_101057773 | 180 |
| 85 | 3300025939 | Ga0207665_10209301 | Ga0207665_102093012 | 180 |
| 86 | 3300025939 | Ga0207665_10226613 | Ga0207665_102266131 | 180 |
| 87 | 3300026035 | Ga0207703_10533983 | Ga0207703_105339831 | 180 |
| 88 | 3300027671 | Ga0209588_1039563 | Ga0209588_10395631 | 180 |
| 89 | 3300027671 | Ga0209588_1067848 | Ga0209588_10678482 | 180 |
| 90 | 3300028379 | Ga0268266_10040425 | Ga0268266_100404253 | 180 |
| 91 | 3300030878 | Ga0265770_1013207 | Ga0265770_10132071 | 180 |
| 92 | 3300031090 | Ga0265760_10004593 | Ga0265760_100045932 | 180 |
| 93 | 3300035086 | Ga0373934_0024341 | Ga0373934_0024341_498_1070 | 180 |
| 94 | 3300035120 | Ga0373957_0136740 | Ga0373957_0136740_231_803 | 180 |
| 95 | 3300035692 | Ga0373935_0077549 | Ga0373935_0077549_604_1158 | 180 |
| 96 | 3300035695 | Ga0373927_0188647 | Ga0373927_0188647_297_863 | 180 |
| 97 | 3300035725 | Ga0373947_0056796 | Ga0373947_0056796_1782_2336 | 180 |
| 98 | 3300036401 | Ga0373937_0019203 | Ga0373937_0019203_4712_5266 | 180 |
| 99 | 3300036401 | Ga0373937_0127533 | Ga0373937_0127533_1544_2116 | 180 |
| 100 | 3300037068 | Ga0373925_0229516 | Ga0373925_0229516_441_1007 | 180 |
| 101 | 3300037853 | Ga0436364_0157811 | Ga0436364_0157811_360511_361062 | 180 |
| 102 | 3300037853 | Ga0436364_1032849 | Ga0436364_1032849_2597_3154 | 180 |
| 103 | 3300042876 | Ga0451577_0905155 | Ga0451577_0905155_216_773 | 180 |
| 104 | 3300046462 | Ga0495651_0529836 | Ga0495651_0529836_136_708 | 180 |
| 105 | 3300046472 | Ga0495580_0197735 | Ga0495580_0197735_293_877 | 180 |
| 106 | 3300046559 | Ga0495667_0279922 | Ga0495667_0279922_273_845 | 180 |
| 107 | 3300046559 | Ga0495667_0471002 | Ga0495667_0471002_210_764 | 180 |
| 108 | 3300046679 | Ga0495623_0102148 | Ga0495623_0102148_1154_1708 | 180 |
| 109 | 3300047317 | Ga0495604_0080524 | Ga0495604_0080524_1058_1612 | 180 |
| 110 | 3300047319 | Ga0495674_0139163 | Ga0495674_0139163_12_566 | 180 |
| 111 | 3300047471 | Ga0495684_0018587 | Ga0495684_0018587_1278_1832 | 180 |
| 112 | 3300048912 | Ga0496109_0476806 | Ga0496109_0476806_57_674 | 180 |
| 113 | 3300048915 | Ga0496112_0332837 | Ga0496112_0332837_103_720 | 180 |
| 114 | 3300048915 | Ga0496112_0794984 | Ga0496112_0794984_131_685 | 180 |
| 115 | 3300050512 | nmdc:mga0n895_641976_c1 | nmdc:mga0n895_641976_c1_277_849 | 180 |
| 116 | 3300050514 | nmdc:mga08x19_15988_c1 | nmdc:mga08x19_15988_c1_3378_3935 | 180 |
| 117 | 3300003841 | Ga0055541_1001452 | Ga0055541_10014522 | 181 |
| 118 | 3300025225 | Ga0209566_100190 | Ga0209566_10019045 | 181 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2hiy-assembly1.cif.gz_A | the structure of conserved bacterial protein sp0830 from streptococcus pneumoniae. | 0.8036 | 1 | 177 |
| 2hiy-assembly1.cif.gz_B | the structure of conserved bacterial protein sp0830 from streptococcus pneumoniae. | 0.7952 | 2 | 176 |
| 2hiy-assembly1.cif.gz_A | the structure of conserved bacterial protein sp0830 from streptococcus pneumoniae. | 0.7881 | 1 | 177 |
| 2hiy-assembly1.cif.gz_B | the structure of conserved bacterial protein sp0830 from streptococcus pneumoniae. | 0.7715 | 2 | 176 |
| 2rsq-assembly1.cif.gz_A | copper(i) loaded form of the first domain of the human copper chaperone for sod1, ccs | 0.6629 | 2 | 79 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_O06552_36_123_3.30.70.1280 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;SP0830-like domains | 0.963 | 2 | 87 | 3.30.70.1280 |
| af_Q54C13_1_90_3.30.70.1280 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;SP0830-like domains | 0.9569 | 1 | 89 | 3.30.70.1280 |
| af_Q54C13_1_90_3.30.70.1280 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;SP0830-like domains | 0.9366 | 1 | 89 | 3.30.70.1280 |
| af_O06552_36_123_3.30.70.1280 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;SP0830-like domains | 0.9105 | 2 | 87 | 3.30.70.1280 |
| af_Q54D49_1_88_3.30.70.1280 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;SP0830-like domains | 0.8907 | 2 | 87 | 3.30.70.1280 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4U3BFR7-F1-model_v4 | deleted | 0.9763 | 1 | 79 |
|
| AF-A0A1I1B1R7-F1-model_v4 | Uncharacterized conserved protein, DUF1697 family | 0.9755 | 1 | 181 |
|
| AF-A0A4U2ZYR9-F1-model_v4 | deleted | 0.9736 | 3 | 87 |
|
| AF-A0A7Z1JP37-F1-model_v4 | deleted | 0.9735 | 1 | 94 |
|
| AF-A0A4U3BFR7-F1-model_v4 | deleted | 0.9642 | 1 | 79 |
|
Predicted Structure (AlphaFold2)
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