F089358
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 116 | 74 | 232 | 196 |
Family's Representative Sequence
| Representative Sequence | 3300041512|Ga0451853_0562486|Ga0451853_0562486_100_729 |
| Length | 209 |
| Sequence | VLTDPECEEQQMSTVVMHAVASLDGYIADQNDEVGPLFDWYFNGDQPIVDEPLEEQHAPFRISSSSLSYVRPFWDSIRATIQGRHLFDLTNGWEAQPPAGEHLIVVSHRSKPEGWHPEADVPFFDDVAAAVTEARRRAGDGMVAVCAGDVGGQALALGLVDEVAIDVVPVVFGRGKRYFDEIDGQLLLEDPDIVIQGDRVLHLRFKVRR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 6 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 7 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 8 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 9 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 10 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 11 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 12 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 13 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 14 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 15 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 16 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 17 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 18 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 20 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 21 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 22 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 23 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 24 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 25 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 26 | 3300041443 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG | Metagenome | Rhizoplane |
| 27 | 3300041451 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG | Metagenome | Rhizoplane |
| 28 | 3300041452 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG | Metagenome | Rhizoplane |
| 29 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 30 | 3300041459 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG | Metagenome | Rhizoplane |
| 31 | 3300041496 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG | Metagenome | Unclassified |
| 32 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 33 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 34 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 35 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 36 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 37 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 38 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 39 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 40 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 41 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 42 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 43 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 44 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 45 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 46 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 47 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 48 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 49 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 50 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 51 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 52 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 53 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 54 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 55 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 56 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 57 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 58 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 59 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 61 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 62 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 63 | 2643221567 | Phycicoccus sp. Root563 | Isolate | Unclassified |
| 64 | 2643221576 | Nocardioides sp. Root614 | Isolate | Unclassified |
| 65 | 2643221590 | Nocardioides sp. Root682 | Isolate | Unclassified |
| 66 | 2643221615 | Nocardioides sp. Root224 | Isolate | Unclassified |
| 67 | 2643221617 | Nocardioides sp. Root79 | Isolate | Unclassified |
| 68 | 2643221620 | Nocardioides sp. Root240 | Isolate | Unclassified |
| 69 | 2643221624 | Phycicoccus sp. Root101 | Isolate | Unclassified |
| 70 | 2643221657 | Nocardioides sp. Root1257 | Isolate | Unclassified |
| 71 | 2808606365 | Phycicoccus sp. SLBN-51 | Isolate | Unclassified |
| 72 | 2818991318 | Humibacillus xanthopallidus SLBN-155 | Isolate | Unclassified |
| 73 | 2818991458 | Terrabacter sp. 3211 | Isolate | Rhizosphere |
| 74 | 2818991462 | Terrabacter sp. 3264 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.66 |
| Metatranscriptomes | 0 |
| Isolates | 10.34 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 5.17 |
| Nodule | 0 |
| Rhizoplane | 20.69 |
| Rhizosphere | 60.34 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0451853_0562486 | 3300041512 | Bacteria | 953 |
| 2 | Ga0070683_100166003 | 3300005329 | Bacteria | 2095 |
| 3 | Ga0070684_100461269 | 3300005535 | Bacteria | 1175 |
| 4 | Ga0070693_100597705 | 3300005547 | Bacteria | 796 |
| 5 | Ga0068852_100281516 | 3300005616 | Bacteria | 1603 |
| 6 | Ga0081455_10141536 | 3300005937 | Bacteria | 1867 |
| 7 | Ga0081539_10059536 | 3300005985 | Bacteria | 2102 |
| 8 | Ga0075365_10428536 | 3300006038 | Bacteria | 934 |
| 9 | Ga0075364_10274418 | 3300006051 | Bacteria | 1147 |
| 10 | Ga0105245_10089100 | 3300009098 | Bacteria | 2836 |
| 11 | Ga0105245_10293091 | 3300009098 | Bacteria | 1594 |
| 12 | Ga0105248_10888919 | 3300009177 | Bacteria | 1006 |
| 13 | Ga0157369_10910013 | 3300013105 | Bacteria | 902 |
| 14 | Ga0163161_10163819 | 3300017792 | Bacteria | 1697 |
| 15 | Ga0213875_10271199 | 3300021388 | Bacteria | 801 |
| 16 | Ga0207687_10041088 | 3300025927 | Bacteria | 3174 |
| 17 | Ga0207687_10212937 | 3300025927 | Bacteria | 1517 |
| 18 | Ga0207711_10855102 | 3300025941 | Bacteria | 846 |
| 19 | Ga0207661_10466345 | 3300025944 | Bacteria | 1152 |
| 20 | Ga0207668_10372359 | 3300025972 | Bacteria | 1200 |
| 21 | Ga0207698_10595040 | 3300026142 | Bacteria | 1090 |
| 22 | Ga0268264_10656298 | 3300028381 | Bacteria | 1038 |
| 23 | Ga0395899_0294057 | 3300037312 | Bacteria | 1101 |
| 24 | Ga0395900_0473736 | 3300037418 | Bacteria | 1205 |
| 25 | Ga0395898_0279948 | 3300037466 | Bacteria | 1591 |
| 26 | Ga0395905_0067846 | 3300037471 | Bacteria | 3341 |
| 27 | Ga0395905_0411727 | 3300037471 | Bacteria | 1247 |
| 28 | Ga0395901_0111251 | 3300038443 | Bacteria | 2876 |
| 29 | Ga0451789_0755146 | 3300041443 | Bacteria | 1058 |
| 30 | Ga0451791_0486201 | 3300041451 | Bacteria | 5667 |
| 31 | Ga0451793_1210644 | 3300041452 | Bacteria | 3599 |
| 32 | Ga0451793_1616527 | 3300041452 | Bacteria | 1283 |
| 33 | Ga0451797_0042671 | 3300041453 | Bacteria | 1010 |
| 34 | Ga0451797_0369267 | 3300041453 | Bacteria | 4117 |
| 35 | Ga0451800_0991932 | 3300041459 | Bacteria | 1366 |
| 36 | Ga0451800_1522640 | 3300041459 | Bacteria | 1103 |
| 37 | Ga0451839_0502325 | 3300041496 | Bacteria | 1321 |
| 38 | Ga0451853_3494848 | 3300041512 | Bacteria | 1817 |
| 39 | Ga0451853_3930906 | 3300041512 | Bacteria | 1291 |
| 40 | Ga0466972_0032317 | 3300044658 | Bacteria | 2570 |
| 41 | Ga0466972_0106917 | 3300044658 | Bacteria | 1323 |
| 42 | Ga0466972_0308981 | 3300044658 | Bacteria | 739 |
| 43 | Ga0466965_0014368 | 3300044683 | Bacteria | 3745 |
| 44 | Ga0466965_0057728 | 3300044683 | Bacteria | 1935 |
| 45 | Ga0466965_0205941 | 3300044683 | Bacteria | 1045 |
| 46 | Ga0466965_0409398 | 3300044683 | Bacteria | 750 |
| 47 | Ga0466966_0426357 | 3300044684 | Bacteria | 797 |
| 48 | Ga0466961_0023063 | 3300044693 | Bacteria | 4003 |
| 49 | Ga0466961_0029247 | 3300044693 | Bacteria | 3543 |
| 50 | Ga0466961_0089900 | 3300044693 | Bacteria | 1939 |
| 51 | Ga0466961_0090087 | 3300044693 | Bacteria | 1937 |
| 52 | Ga0466961_0171889 | 3300044693 | Bacteria | 1348 |
| 53 | Ga0466961_0217326 | 3300044693 | Bacteria | 1179 |
| 54 | Ga0466970_0012789 | 3300044765 | Bacteria | 4296 |
| 55 | Ga0466970_0040599 | 3300044765 | Bacteria | 2471 |
| 56 | Ga0466970_0076866 | 3300044765 | Bacteria | 1799 |
| 57 | Ga0466970_0090720 | 3300044765 | Bacteria | 1658 |
| 58 | Ga0466970_0113628 | 3300044765 | Bacteria | 1480 |
| 59 | Ga0466970_0182025 | 3300044765 | Bacteria | 1166 |
| 60 | Ga0466957_0218493 | 3300044842 | Bacteria | 1258 |
| 61 | Ga0466957_0404167 | 3300044842 | Bacteria | 934 |
| 62 | Ga0466960_0012029 | 3300044901 | Bacteria | 3642 |
| 63 | Ga0466960_0044111 | 3300044901 | Bacteria | 2125 |
| 64 | Ga0466960_0092249 | 3300044901 | Bacteria | 1546 |
| 65 | Ga0466960_0471031 | 3300044901 | Bacteria | 732 |
| 66 | Ga0466960_0487544 | 3300044901 | Bacteria | 721 |
| 67 | Ga0466958_0299474 | 3300045836 | Bacteria | 1032 |
| 68 | Ga0466967_0000866 | 3300045976 | Bacteria | 16119 |
| 69 | Ga0466967_0032986 | 3300045976 | Bacteria | 4379 |
| 70 | Ga0466967_0039855 | 3300045976 | Bacteria | 4042 |
| 71 | Ga0466967_0049624 | 3300045976 | Bacteria | 3671 |
| 72 | Ga0466967_0285908 | 3300045976 | Bacteria | 1583 |
| 73 | Ga0466967_0333998 | 3300045976 | Bacteria | 1464 |
| 74 | Ga0466967_0456005 | 3300045976 | Bacteria | 1250 |
| 75 | Ga0495653_0265398 | 3300046463 | Bacteria | 1133 |
| 76 | Ga0495652_0179063 | 3300046529 | Bacteria | 1629 |
| 77 | Ga0495635_0381920 | 3300046663 | Bacteria | 937 |
| 78 | Ga0496100_0485117 | 3300048903 | Bacteria | 951 |
| 79 | Ga0496101_0104484 | 3300048904 | Bacteria | 2125 |
| 80 | Ga0496101_0185919 | 3300048904 | Bacteria | 1602 |
| 81 | Ga0496101_0193604 | 3300048904 | Bacteria | 1570 |
| 82 | Ga0496102_0038850 | 3300048905 | Bacteria | 4298 |
| 83 | Ga0496102_0375839 | 3300048905 | Bacteria | 1337 |
| 84 | Ga0496106_0783631 | 3300048909 | Bacteria | 757 |
| 85 | Ga0496107_0285919 | 3300048910 | Bacteria | 1227 |
| 86 | Ga0496108_0061542 | 3300048911 | Bacteria | 3159 |
| 87 | Ga0496109_0013990 | 3300048912 | Bacteria | 6975 |
| 88 | Ga0496110_0220716 | 3300048913 | Bacteria | 1724 |
| 89 | Ga0496114_0023516 | 3300048917 | Bacteria | 5029 |
| 90 | Ga0496114_0243888 | 3300048917 | Bacteria | 1580 |
| 91 | Ga0496114_0625194 | 3300048917 | Bacteria | 949 |
| 92 | Ga0496115_0558062 | 3300048918 | Bacteria | 915 |
| 93 | Ga0496115_0850904 | 3300048918 | Bacteria | 706 |
| 94 | Ga0496126_0120383 | 3300048929 | Bacteria | 2277 |
| 95 | Ga0501067_0032340 | 3300049583 | Bacteria | 2904 |
| 96 | Ga0501067_0035756 | 3300049583 | Bacteria | 2758 |
| 97 | Ga0501068_0131460 | 3300049584 | Bacteria | 1565 |
| 98 | Ga0501069_0062915 | 3300049585 | Bacteria | 2072 |
| 99 | Ga0501069_0207717 | 3300049585 | Bacteria | 1136 |
| 100 | nmdc:mga0yw44_161887_c1 | 3300050492 | Bacteria | 1465 |
| 101 | Ga0495595_0340687 | 3300053084 | Bacteria | 756 |
| 102 | Ga0500556_0001599 | 3300053104 | Bacteria | 8993 |
| 103 | Ga0500593_000032 | 3300053117 | Bacteria | 49592 |
| 104 | Ga0500573_0031806 | 3300053140 | Bacteria | 3045 |
| 105 | 2643853301 | 2643221567 | Bacteria | 4163945 |
| 106 | 2643891324 | 2643221576 | Bacteria | 5214352 |
| 107 | 2643960372 | 2643221590 | Bacteria | 5214697 |
| 108 | 2644089500 | 2643221615 | Bacteria | 5487866 |
| 109 | 2644102009 | 2643221617 | Bacteria | 5139111 |
| 110 | 2644115232 | 2643221620 | Bacteria | 5134593 |
| 111 | 2644137261 | 2643221624 | Bacteria | 4384879 |
| 112 | 2644319345 | 2643221657 | Bacteria | 5490246 |
| 113 | 2808871829 | 2808606365 | Bacteria | 4301966 |
| 114 | 2819425764 | 2818991318 | Bacteria | 5266538 |
| 115 | 2819667970 | 2818991458 | Bacteria | 4794049 |
| 116 | 2819690105 | 2818991462 | Bacteria | 4320267 |
| 117 | Ga0451853_0562486 | |||
| 118 | Ga0070683_100166003 | |||
| 119 | Ga0070684_100461269 | |||
| 120 | Ga0070693_100597705 | |||
| 121 | Ga0068852_100281516 | |||
| 122 | Ga0081455_10141536 | |||
| 123 | Ga0081539_10059536 | |||
| 124 | Ga0075365_10428536 | |||
| 125 | Ga0075364_10274418 | |||
| 126 | Ga0105245_10089100 | |||
| 127 | Ga0105245_10293091 | |||
| 128 | Ga0105248_10888919 | |||
| 129 | Ga0157369_10910013 | |||
| 130 | Ga0163161_10163819 | |||
| 131 | Ga0213875_10271199 | |||
| 132 | Ga0207687_10041088 | |||
| 133 | Ga0207687_10212937 | |||
| 134 | Ga0207711_10855102 | |||
| 135 | Ga0207661_10466345 | |||
| 136 | Ga0207668_10372359 | |||
| 137 | Ga0207698_10595040 | |||
| 138 | Ga0268264_10656298 | |||
| 139 | Ga0395899_0294057 | |||
| 140 | Ga0395900_0473736 | |||
| 141 | Ga0395898_0279948 | |||
| 142 | Ga0395905_0067846 | |||
| 143 | Ga0395905_0411727 | |||
| 144 | Ga0395901_0111251 | |||
| 145 | Ga0451789_0755146 | |||
| 146 | Ga0451791_0486201 | |||
| 147 | Ga0451793_1210644 | |||
| 148 | Ga0451793_1616527 | |||
| 149 | Ga0451797_0042671 | |||
| 150 | Ga0451797_0369267 | |||
| 151 | Ga0451800_0991932 | |||
| 152 | Ga0451800_1522640 | |||
| 153 | Ga0451839_0502325 | |||
| 154 | Ga0451853_3494848 | |||
| 155 | Ga0451853_3930906 | |||
| 156 | Ga0466972_0032317 | |||
| 157 | Ga0466972_0106917 | |||
| 158 | Ga0466972_0308981 | |||
| 159 | Ga0466965_0014368 | |||
| 160 | Ga0466965_0057728 | |||
| 161 | Ga0466965_0205941 | |||
| 162 | Ga0466965_0409398 | |||
| 163 | Ga0466966_0426357 | |||
| 164 | Ga0466961_0023063 | |||
| 165 | Ga0466961_0029247 | |||
| 166 | Ga0466961_0089900 | |||
| 167 | Ga0466961_0090087 | |||
| 168 | Ga0466961_0171889 | |||
| 169 | Ga0466961_0217326 | |||
| 170 | Ga0466970_0012789 | |||
| 171 | Ga0466970_0040599 | |||
| 172 | Ga0466970_0076866 | |||
| 173 | Ga0466970_0090720 | |||
| 174 | Ga0466970_0113628 | |||
| 175 | Ga0466970_0182025 | |||
| 176 | Ga0466957_0218493 | |||
| 177 | Ga0466957_0404167 | |||
| 178 | Ga0466960_0012029 | |||
| 179 | Ga0466960_0044111 | |||
| 180 | Ga0466960_0092249 | |||
| 181 | Ga0466960_0471031 | |||
| 182 | Ga0466960_0487544 | |||
| 183 | Ga0466958_0299474 | |||
| 184 | Ga0466967_0000866 | |||
| 185 | Ga0466967_0032986 | |||
| 186 | Ga0466967_0039855 | |||
| 187 | Ga0466967_0049624 | |||
| 188 | Ga0466967_0285908 | |||
| 189 | Ga0466967_0333998 | |||
| 190 | Ga0466967_0456005 | |||
| 191 | Ga0495653_0265398 | |||
| 192 | Ga0495652_0179063 | |||
| 193 | Ga0495635_0381920 | |||
| 194 | Ga0496100_0485117 | |||
| 195 | Ga0496101_0104484 | |||
| 196 | Ga0496101_0185919 | |||
| 197 | Ga0496101_0193604 | |||
| 198 | Ga0496102_0038850 | |||
| 199 | Ga0496102_0375839 | |||
| 200 | Ga0496106_0783631 | |||
| 201 | Ga0496107_0285919 | |||
| 202 | Ga0496108_0061542 | |||
| 203 | Ga0496109_0013990 | |||
| 204 | Ga0496110_0220716 | |||
| 205 | Ga0496114_0023516 | |||
| 206 | Ga0496114_0243888 | |||
| 207 | Ga0496114_0625194 | |||
| 208 | Ga0496115_0558062 | |||
| 209 | Ga0496115_0850904 | |||
| 210 | Ga0496126_0120383 | |||
| 211 | Ga0501067_0032340 | |||
| 212 | Ga0501067_0035756 | |||
| 213 | Ga0501068_0131460 | |||
| 214 | Ga0501069_0062915 | |||
| 215 | Ga0501069_0207717 | |||
| 216 | nmdc:mga0yw44_161887_c1 | |||
| 217 | Ga0495595_0340687 | |||
| 218 | Ga0500556_0001599 | |||
| 219 | Ga0500593_000032 | |||
| 220 | Ga0500573_0031806 | |||
| 221 | 2643853301 | |||
| 222 | 2643891324 | |||
| 223 | 2643960372 | |||
| 224 | 2644089500 | |||
| 225 | 2644102009 | |||
| 226 | 2644115232 | |||
| 227 | 2644137261 | |||
| 228 | 2644319345 | |||
| 229 | 2808871829 | |||
| 230 | 2819425764 | |||
| 231 | 2819667970 | |||
| 232 | 2819690105 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3kgy-assembly1.cif.gz_B | crystal structure of putative dihydrofolate reductase (yp_001636057.1) from chloroflexus aurantiacus j-10-fl at 1.50 a resolution | 0.7986 | 1 | 197 |
| 3jtw-assembly2.cif.gz_B-3 | crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution | 0.794 | 1 | 197 |
| 3kgy-assembly1.cif.gz_B | crystal structure of putative dihydrofolate reductase (yp_001636057.1) from chloroflexus aurantiacus j-10-fl at 1.50 a resolution | 0.7913 | 1 | 197 |
| 3jtw-assembly2.cif.gz_B-3 | crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution | 0.7899 | 1 | 197 |
| 2xw7-assembly1.cif.gz_B | structure of mycobacterium smegmatis putative reductase ms0308 | 0.7842 | 1 | 198 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2xw7B00 | Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A | 0.7842 | 1 | 198 | 3.40.430.10 |
| 2xw7B00 | Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A | 0.7761 | 1 | 198 | 3.40.430.10 |
| 3kgyB00 | Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A | 0.7667 | 2 | 197 | 3.40.430.10 |
| 3jtwB00 | Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A | 0.7621 | 1 | 197 | 3.40.430.10 |
| 3jtwB00 | Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A | 0.758 | 1 | 197 | 3.40.430.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A366LPL5-F1-model_v4 | Dihydrofolate reductase | 0.9698 | 3 | 198 |
GO:0008703
GO:0009231 |
| AF-A0A516PVP3-F1-model_v4 | Dihydrofolate reductase | 0.9672 | 1 | 198 |
GO:0008703
GO:0009231 |
| AF-A0A516PVP3-F1-model_v4 | Dihydrofolate reductase | 0.9623 | 1 | 198 |
GO:0008703
GO:0009231 |
| AF-A0A3M8V9I8-F1-model_v4 | Dihydrofolate reductase | 0.9621 | 1 | 198 |
GO:0008703
GO:0009231 |
| AF-A0A419HSL7-F1-model_v4 | Dihydrofolate reductase | 0.9606 | 1 | 198 |
GO:0008703
GO:0009231 |