F088722

General Info

Members Datasets Scaffolds Average Seq Length
116 79 232 320

Family's Representative Sequence

Representative Sequence 3300028563|Ga0265319_1000027|Ga0265319_1000027122
Length 353
Sequence MRIRPIIREMSPMTSAATMKELKIIFMGTAELSCASLEKLAEKFSVAAVVTQPDKPKGRELKPQSSPVKTLAEKLKLPVLQPARARDEKFISELRELKPDLIVVVAYGQILPQSILDLPKFGCMNVHTSLLPKFRGASPIQSAILNGETETGVTIMKMDAGLDTGEIISQARTPILPEDNSQTLHDRLAQLGAELLVETIPDYLAGKISPKPQPTEGVSYAAKIKREDGKIDWNEPAEKILNRLRAFTPWPGAFAFLPESVGRASSRAEDKISERLAGSLAPPKAQLLKIWKAEVVERSGAAGEILQADKNGIVIACGQNALRILELQREGGRRMNAAEFLAGHPLKIGERFE

Samples

Sample ID Description Type Environment
1 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
12 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
13 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
16 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
19 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
20 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
27 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
28 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
29 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
30 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
31 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
32 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
33 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
34 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
35 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
36 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
37 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
38 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
39 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
40 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
41 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
42 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
43 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
44 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
45 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
46 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
47 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
48 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
49 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
50 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
51 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
52 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
53 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
54 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
55 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
56 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
57 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
58 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
59 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
60 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
61 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
62 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
63 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
64 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
65 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
66 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
67 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
68 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
69 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
70 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
71 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
72 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
73 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
74 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
75 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
76 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
77 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
78 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
79 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.86
Nodule 0
Rhizoplane 0
Rhizosphere 97.41
Stem 0
Stem Tuber 0
Unclassified 11.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265319_1000027 3300028563 Bacteria 139786
2 rootH1_10054369 3300003316 Bacteria 12308
3 Ga0070690_100078638 3300005330 Bacteria 2155
4 Ga0070689_100224727 3300005340 Bacteria 1541
5 Ga0070688_100096184 3300005365 Bacteria 1945
6 Ga0070713_100000170 3300005436 Bacteria 43529
7 Ga0070705_100114266 3300005440 Bacteria 1731
8 Ga0068867_100077147 3300005459 Bacteria 2503
9 Ga0068855_100147286 3300005563 Bacteria 2679
10 Ga0068856_100000067 3300005614 Bacteria 98357
11 Ga0068856_100079909 3300005614 Bacteria 3243
12 Ga0068858_100101136 3300005842 Bacteria 2688
13 Ga0070716_100113351 3300006173 Bacteria 1684
14 Ga0070712_100321768 3300006175 Bacteria 1258
15 Ga0075431_100009275 3300006847 Bacteria 9875
16 Ga0105240_10114501 3300009093 Bacteria 3258
17 Ga0111539_10021791 3300009094 Bacteria 7878
18 Ga0114129_10688720 3300009147 Unclassified 1315
19 Ga0105238_10003276 3300009551 Bacteria 16157
20 Ga0105238_10034139 3300009551 Bacteria 5177
21 Ga0105238_10194206 3300009551 Bacteria 2006
22 Ga0157379_10377497 3300014968 Bacteria 1300
23 Ga0207695_10105656 3300025913 Bacteria 2803
24 Ga0207663_10135012 3300025916 Bacteria 1711
25 Ga0207694_10006198 3300025924 Bacteria 9130
26 Ga0207694_10084616 3300025924 Bacteria 2495
27 Ga0207700_10000018 3300025928 Bacteria 191007
28 Ga0207664_10115632 3300025929 Bacteria 2237
29 Ga0207702_10005853 3300026078 Bacteria 10693
30 Ga0207428_10110509 3300027907 Bacteria 2116
31 Ga0265337_1000553 3300028556 Bacteria 19769
32 Ga0265337_1022967 3300028556 Bacteria 1924
33 Ga0265326_10030200 3300028558 Bacteria 1543
34 Ga0265319_1067541 3300028563 Unclassified 1150
35 Ga0265334_10046769 3300028573 Unclassified 1671
36 Ga0265334_10067113 3300028573 Bacteria 1341
37 Ga0265323_10035988 3300028653 Bacteria 1822
38 Ga0265323_10043992 3300028653 Bacteria 1610
39 Ga0265336_10000513 3300028666 Bacteria 22444
40 Ga0265338_10000016 3300028800 Bacteria 347424
41 Ga0265338_10002451 3300028800 Bacteria 27776
42 Ga0265338_10003154 3300028800 Bacteria 23528
43 Ga0265338_10009669 3300028800 Bacteria 11437
44 Ga0265338_10018613 3300028800 Bacteria 7421
45 Ga0265338_10027462 3300028800 Bacteria 5710
46 Ga0265338_10028721 3300028800 Bacteria 5539
47 Ga0265338_10040860 3300028800 Bacteria 4349
48 Ga0265338_10053754 3300028800 Bacteria 3599
49 Ga0265338_10071606 3300028800 Bacteria 2965
50 Ga0265338_10168253 3300028800 Unclassified 1684
51 Ga0265324_10000544 3300029957 Bacteria 25796
52 Ga0265324_10000835 3300029957 Bacteria 20013
53 Ga0265324_10037841 3300029957 Bacteria 1675
54 Ga0265330_10038441 3300031235 Bacteria 2128
55 Ga0265330_10076414 3300031235 Bacteria 1446
56 Ga0265320_10001635 3300031240 Bacteria 16021
57 Ga0265320_10003417 3300031240 Bacteria 10685
58 Ga0265320_10035633 3300031240 Bacteria 2521
59 Ga0265320_10046383 3300031240 Bacteria 2130
60 Ga0265325_10022651 3300031241 Bacteria 3438
61 Ga0265339_10078585 3300031249 Bacteria 1746
62 Ga0265316_10009515 3300031344 Bacteria 8945
63 Ga0265316_10025350 3300031344 Bacteria 4950
64 Ga0265316_10076255 3300031344 Bacteria 2576
65 Ga0265316_10130840 3300031344 Bacteria 1890
66 Ga0265313_10009945 3300031595 Bacteria 6104
67 Ga0316579_10002113 3300031691 Bacteria 7450
68 Ga0265314_10038351 3300031711 Unclassified 3462
69 Ga0265314_10071538 3300031711 Bacteria 2320
70 Ga0265342_10008355 3300031712 Bacteria 7434
71 Ga0316576_10023401 3300031727 Unclassified 4303
72 Ga0307516_10313297 3300031730 Bacteria 1242
73 Ga0373943_0024982 3300035170 Bacteria 2790
74 Ga0316574_0006292 3300035398 Bacteria 6401
75 Ga0373927_0014223 3300035695 Bacteria 5277
76 Ga0316584_0015504 3300036712 Bacteria 5451
77 Ga0373925_0092558 3300037068 Unclassified 2313
78 Ga0436362_0404912 3300039453 Bacteria 1513
79 Ga0451577_0007032 3300042876 Bacteria 11100
80 Ga0451577_0052857 3300042876 Bacteria 3627
81 Ga0453684_0029497 3300044712 Bacteria 7785
82 Ga0451576_0070560 3300045051 Bacteria 3637
83 Ga0451576_0208559 3300045051 Bacteria 2040
84 Ga0451576_0357750 3300045051 Bacteria 1529
85 Ga0495629_0037980 3300046459 Bacteria 3394
86 Ga0495641_0011060 3300046461 Bacteria 5170
87 Ga0495650_0010863 3300046471 Bacteria 5046
88 Ga0495662_0021058 3300046476 Unclassified 3154
89 Ga0495628_0336421 3300046516 Bacteria 1112
90 Ga0495630_0000054 3300046517 Bacteria 91921
91 Ga0495666_0002682 3300046526 Bacteria 8878
92 Ga0495666_0069020 3300046526 Bacteria 1682
93 Ga0495640_0040759 3300046533 Bacteria 3250
94 Ga0495586_0000014 3300046535 Bacteria 131102
95 Ga0495586_0014839 3300046535 Bacteria 4140
96 Ga0495667_0034745 3300046559 Bacteria 3370
97 Ga0495634_0114653 3300046642 Bacteria 1730
98 Ga0495658_0023005 3300046683 Unclassified 3304
99 Ga0495658_0072646 3300046683 Bacteria 2001
100 Ga0495613_0037315 3300046689 Unclassified 3603
101 Ga0495613_0069650 3300046689 Bacteria 2564
102 Ga0495624_0090136 3300046690 Unclassified 1892
103 Ga0495581_0043845 3300047315 Bacteria 2587
104 Ga0495674_0001703 3300047319 Bacteria 21633
105 Ga0495676_0036303 3300047321 Unclassified 4117
106 Ga0495680_0026702 3300047322 Bacteria 4755
107 Ga0495684_0177486 3300047471 Bacteria 1581
108 Ga0501080_0272169 3300049742 Bacteria 1541
109 Ga0501083_0000044 3300049744 Bacteria 91900
110 Ga0501035_0111171 3300049822 Bacteria 2401
111 Ga0501035_0270247 3300049822 Bacteria 1439
112 nmdc:mga0qj67_437054_c1 3300050509 Bacteria 1054
113 nmdc:mga0qj67_93054_c1 3300050509 Bacteria 2423
114 nmdc:mga06r32_32759_c1 3300050510 Unclassified 4893
115 nmdc:mga08y16_187519_c1 3300050511 Bacteria 2146
116 Ga0500650_0061068 3300053098 Bacteria 1760
117 Ga0265319_1000027
118 rootH1_10054369
119 Ga0070690_100078638
120 Ga0070689_100224727
121 Ga0070688_100096184
122 Ga0070713_100000170
123 Ga0070705_100114266
124 Ga0068867_100077147
125 Ga0068855_100147286
126 Ga0068856_100000067
127 Ga0068856_100079909
128 Ga0068858_100101136
129 Ga0070716_100113351
130 Ga0070712_100321768
131 Ga0075431_100009275
132 Ga0105240_10114501
133 Ga0111539_10021791
134 Ga0114129_10688720
135 Ga0105238_10003276
136 Ga0105238_10034139
137 Ga0105238_10194206
138 Ga0157379_10377497
139 Ga0207695_10105656
140 Ga0207663_10135012
141 Ga0207694_10006198
142 Ga0207694_10084616
143 Ga0207700_10000018
144 Ga0207664_10115632
145 Ga0207702_10005853
146 Ga0207428_10110509
147 Ga0265337_1000553
148 Ga0265337_1022967
149 Ga0265326_10030200
150 Ga0265319_1067541
151 Ga0265334_10046769
152 Ga0265334_10067113
153 Ga0265323_10035988
154 Ga0265323_10043992
155 Ga0265336_10000513
156 Ga0265338_10000016
157 Ga0265338_10002451
158 Ga0265338_10003154
159 Ga0265338_10009669
160 Ga0265338_10018613
161 Ga0265338_10027462
162 Ga0265338_10028721
163 Ga0265338_10040860
164 Ga0265338_10053754
165 Ga0265338_10071606
166 Ga0265338_10168253
167 Ga0265324_10000544
168 Ga0265324_10000835
169 Ga0265324_10037841
170 Ga0265330_10038441
171 Ga0265330_10076414
172 Ga0265320_10001635
173 Ga0265320_10003417
174 Ga0265320_10035633
175 Ga0265320_10046383
176 Ga0265325_10022651
177 Ga0265339_10078585
178 Ga0265316_10009515
179 Ga0265316_10025350
180 Ga0265316_10076255
181 Ga0265316_10130840
182 Ga0265313_10009945
183 Ga0316579_10002113
184 Ga0265314_10038351
185 Ga0265314_10071538
186 Ga0265342_10008355
187 Ga0316576_10023401
188 Ga0307516_10313297
189 Ga0373943_0024982
190 Ga0316574_0006292
191 Ga0373927_0014223
192 Ga0316584_0015504
193 Ga0373925_0092558
194 Ga0436362_0404912
195 Ga0451577_0007032
196 Ga0451577_0052857
197 Ga0453684_0029497
198 Ga0451576_0070560
199 Ga0451576_0208559
200 Ga0451576_0357750
201 Ga0495629_0037980
202 Ga0495641_0011060
203 Ga0495650_0010863
204 Ga0495662_0021058
205 Ga0495628_0336421
206 Ga0495630_0000054
207 Ga0495666_0002682
208 Ga0495666_0069020
209 Ga0495640_0040759
210 Ga0495586_0000014
211 Ga0495586_0014839
212 Ga0495667_0034745
213 Ga0495634_0114653
214 Ga0495658_0023005
215 Ga0495658_0072646
216 Ga0495613_0037315
217 Ga0495613_0069650
218 Ga0495624_0090136
219 Ga0495581_0043845
220 Ga0495674_0001703
221 Ga0495676_0036303
222 Ga0495680_0026702
223 Ga0495684_0177486
224 Ga0501080_0272169
225 Ga0501083_0000044
226 Ga0501035_0111171
227 Ga0501035_0270247
228 nmdc:mga0qj67_437054_c1
229 nmdc:mga0qj67_93054_c1
230 nmdc:mga06r32_32759_c1
231 nmdc:mga08y16_187519_c1
232 Ga0500650_0061068

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00551

Formyl_trans_N

Formyl transferase

22

200

0.91

PF02911

Formyl_trans_C

Formyl transferase, C-terminal domain

223

345

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fmt-assembly2.cif.gz_B methionyl-trnafmet formyltransferase complexed with formyl-methionyl-trnafmet 0.9377 1 301
2fmt-assembly2.cif.gz_B methionyl-trnafmet formyltransferase complexed with formyl-methionyl-trnafmet 0.9348 1 301
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.9228 3 296
5uai-assembly1.cif.gz_A crystal structure of methionyl-trna formyltransferase from pseudomonas aeruginosa 0.9215 4 300
5uai-assembly1.cif.gz_A crystal structure of methionyl-trna formyltransferase from pseudomonas aeruginosa 0.907 4 300
ID Description Score Start End Superfamily
af_P9WND3_1_310_3.40.50.12230 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9302 4 298 3.40.50.12230
af_B4FRN6_28_246_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9279 3 204 3.40.50.170
af_I1K1P3_39_365_3.40.50.12230 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9248 6 300 3.40.50.12230
3q0iA02 Alpha Beta;Roll;Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2;Formyl transferase, C-terminal domain 0.9226 206 300 3.10.25.10
af_Q8IEI1_254_463_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9108 3 185 3.40.50.170
ID Description Score Start End GO Terms
AF-A0A4U9D9B3-F1-model_v4 Polymyxin resistance protein PmrI 0.9707 104 189 GO:0004479
GO:0005829
AF-A0A1D6NF93-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9658 66 225 GO:0004479
AF-A0A6I5CEE9-F1-model_v4 Methionyl-tRNA formyltransferase 0.9564 86 298 GO:0004479
GO:0005829
AF-A0A2M7FHT7-F1-model_v4 Methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9558 33 295 GO:0004479
GO:0005829
AF-A0A1J4VFA6-F1-model_v4 Methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9539 104 297 GO:0004479
GO:0005829

Map