F088657
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 116 | 62 | 232 | 283 |
Family's Representative Sequence
| Representative Sequence | 3300026088|Ga0207641_10616238|Ga0207641_106162381 |
| Length | 310 |
| Sequence | VLKHSVVSAFRRKPTRAPALHKALLLRYQHQLQPPFDPDADILRIDAEATRRWLVEFLRDEVGRRRGFKQVVVGLSGGVDSALTTFLCAEAFGPDQVLAVRMPYRTSSRESLEHAQLVIDALGIRETTIDISAAVDGYARLDPEIDGRRKGNIMARTRMIVLFDQSQKIGCIPVGTGNKTERLFGYYTWHADDSPPVNPLGDLFKSQVWQLARHMGVPEPIVAKPASADLIVGQTDEADFGITYGLADRILHFMLQGYPFAKLVAMGFREADVALVKRRVDSTHWKRHLPSTAMLSTTAIGEYYLRPLDY |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 3 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 4 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 7 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 9 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 10 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 11 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 12 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 13 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 14 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 15 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 16 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 17 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 18 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 19 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 20 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 21 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 22 | 3300021441 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 | Metagenome | Rhizosphere |
| 23 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300028017 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 | Metagenome | Rhizosphere |
| 33 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 34 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 35 | 3300030760 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 36 | 3300030878 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 37 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 38 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 39 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 40 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 41 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 42 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 43 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 44 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 45 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 46 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 47 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 48 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 49 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 50 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 51 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 52 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 53 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 54 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 55 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 56 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 57 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 58 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 59 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 60 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 61 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300049652 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.55 |
| Metatranscriptomes | 3.45 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 78.45 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 18.97 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0207641_10616238 | 3300026088 | Bacteria | 1064 |
| 2 | Ga0070680_100263944 | 3300005336 | Bacteria | 1457 |
| 3 | Ga0070691_10046497 | 3300005341 | Bacteria | 2061 |
| 4 | Ga0070714_100036576 | 3300005435 | Unclassified | 4118 |
| 5 | Ga0070714_100043258 | 3300005435 | Bacteria | 3809 |
| 6 | Ga0070714_100050100 | 3300005435 | Bacteria | 3556 |
| 7 | Ga0070714_100632591 | 3300005435 | Bacteria | 1029 |
| 8 | Ga0070663_100102018 | 3300005455 | Bacteria | 2143 |
| 9 | Ga0070663_100146031 | 3300005455 | Bacteria | 1810 |
| 10 | Ga0070707_100116126 | 3300005468 | Unclassified | 2598 |
| 11 | Ga0070684_100169604 | 3300005535 | Unclassified | 1982 |
| 12 | Ga0068855_100000757 | 3300005563 | Bacteria | 39751 |
| 13 | Ga0068855_100008450 | 3300005563 | Bacteria | 12450 |
| 14 | Ga0068854_100000023 | 3300005578 | Bacteria | 127086 |
| 15 | Ga0068856_100008615 | 3300005614 | Bacteria | 9918 |
| 16 | Ga0068852_100202881 | 3300005616 | Bacteria | 1877 |
| 17 | Ga0105240_10065231 | 3300009093 | Bacteria | 4521 |
| 18 | Ga0114129_10466124 | 3300009147 | Bacteria | 1655 |
| 19 | Ga0157369_10262851 | 3300013105 | Bacteria | 1800 |
| 20 | Ga0157374_10011014 | 3300013296 | Bacteria | 7810 |
| 21 | Ga0157374_10110498 | 3300013296 | Bacteria | 2644 |
| 22 | Ga0206356_11580069 | 3300020070 | Bacteria | 10270 |
| 23 | Ga0213873_10000791 | 3300021358 | Bacteria | 5108 |
| 24 | Ga0213873_10002204 | 3300021358 | Unclassified | 3347 |
| 25 | Ga0213873_10006471 | 3300021358 | Bacteria | 2305 |
| 26 | Ga0213872_10009616 | 3300021361 | Bacteria | 4630 |
| 27 | Ga0213872_10021449 | 3300021361 | Unclassified | 2975 |
| 28 | Ga0213872_10036088 | 3300021361 | Bacteria | 2260 |
| 29 | Ga0213874_10009234 | 3300021377 | Bacteria | 2431 |
| 30 | Ga0213874_10070249 | 3300021377 | Bacteria | 1115 |
| 31 | Ga0213876_10012373 | 3300021384 | Bacteria | 4541 |
| 32 | Ga0213875_10000001 | 3300021388 | Bacteria | 2793540 |
| 33 | Ga0213875_10001736 | 3300021388 | Bacteria | 13657 |
| 34 | Ga0213875_10030592 | 3300021388 | Bacteria | 2548 |
| 35 | Ga0213875_10036700 | 3300021388 | Bacteria | 2311 |
| 36 | Ga0213875_10053678 | 3300021388 | Bacteria | 1887 |
| 37 | Ga0213871_10002310 | 3300021441 | Bacteria | 3484 |
| 38 | Ga0207695_10165316 | 3300025913 | Bacteria | 2141 |
| 39 | Ga0207649_10144017 | 3300025920 | Bacteria | 1634 |
| 40 | Ga0207646_10155325 | 3300025922 | Unclassified | 2064 |
| 41 | Ga0207664_10174990 | 3300025929 | Unclassified | 1839 |
| 42 | Ga0207667_10000101 | 3300025949 | Bacteria | 137935 |
| 43 | Ga0207667_10003749 | 3300025949 | Bacteria | 18721 |
| 44 | Ga0207640_10000233 | 3300025981 | Bacteria | 38424 |
| 45 | Ga0207678_10029280 | 3300026067 | Bacteria | 4805 |
| 46 | Ga0207678_10059918 | 3300026067 | Bacteria | 3275 |
| 47 | Ga0207702_10007627 | 3300026078 | Bacteria | 9209 |
| 48 | Ga0207698_10059636 | 3300026142 | Bacteria | 2964 |
| 49 | Ga0265356_1000022 | 3300028017 | Bacteria | 24320 |
| 50 | Ga0265334_10033902 | 3300028573 | Unclassified | 2029 |
| 51 | Ga0265338_10000170 | 3300028800 | Bacteria | 120070 |
| 52 | Ga0265762_1012989 | 3300030760 | Unclassified | 1498 |
| 53 | Ga0265770_1001415 | 3300030878 | Unclassified | 3303 |
| 54 | Ga0265760_10001662 | 3300031090 | Bacteria | 6528 |
| 55 | Ga0265325_10000069 | 3300031241 | Bacteria | 71127 |
| 56 | Ga0265329_10016204 | 3300031242 | Unclassified | 2588 |
| 57 | Ga0265340_10131090 | 3300031247 | Bacteria | 1150 |
| 58 | Ga0265340_10138477 | 3300031247 | Bacteria | 1114 |
| 59 | Ga0265339_10003581 | 3300031249 | Bacteria | 10851 |
| 60 | Ga0265327_10024428 | 3300031251 | Unclassified | 3552 |
| 61 | Ga0265313_10000130 | 3300031595 | Bacteria | 76026 |
| 62 | Ga0265314_10092934 | 3300031711 | Bacteria | 1960 |
| 63 | Ga0265342_10005100 | 3300031712 | Bacteria | 10118 |
| 64 | Ga0265342_10030649 | 3300031712 | Unclassified | 3331 |
| 65 | Ga0395899_0003852 | 3300037312 | Bacteria | 11831 |
| 66 | Ga0395900_0319816 | 3300037418 | Bacteria | 1532 |
| 67 | Ga0395898_0022150 | 3300037466 | Bacteria | 6437 |
| 68 | Ga0436364_0207181 | 3300037853 | Bacteria | 13657 |
| 69 | Ga0436364_0273345 | 3300037853 | Bacteria | 2794207 |
| 70 | Ga0436364_0648457 | 3300037853 | Bacteria | 4816 |
| 71 | Ga0436364_0691245 | 3300037853 | Bacteria | 7055 |
| 72 | Ga0436364_0853581 | 3300037853 | Unclassified | 1819 |
| 73 | Ga0436364_0853777 | 3300037853 | Unclassified | 1450 |
| 74 | Ga0436364_0899639 | 3300037853 | Bacteria | 1953 |
| 75 | Ga0436364_0943736 | 3300037853 | Bacteria | 2640 |
| 76 | Ga0436364_1515982 | 3300037853 | Bacteria | 9920 |
| 77 | Ga0436364_1516378 | 3300037853 | Bacteria | 8350 |
| 78 | Ga0395901_0019286 | 3300038443 | Bacteria | 6972 |
| 79 | Ga0436365_0127948 | 3300039437 | Bacteria | 3720 |
| 80 | Ga0436360_0048139 | 3300039438 | Bacteria | 1281 |
| 81 | Ga0436360_0369475 | 3300039438 | Bacteria | 15479 |
| 82 | Ga0436360_0389145 | 3300039438 | Bacteria | 994 |
| 83 | Ga0436360_0567886 | 3300039438 | Bacteria | 944 |
| 84 | Ga0436360_0708621 | 3300039438 | Bacteria | 3736 |
| 85 | Ga0436360_1262413 | 3300039438 | Unclassified | 4599 |
| 86 | Ga0436361_0041996 | 3300039447 | Bacteria | 4372 |
| 87 | Ga0436361_0044179 | 3300039447 | Bacteria | 19497 |
| 88 | Ga0436361_0075444 | 3300039447 | Unclassified | 1868 |
| 89 | Ga0436361_0676948 | 3300039447 | Unclassified | 1309 |
| 90 | Ga0436361_0743818 | 3300039447 | Bacteria | 1947 |
| 91 | Ga0436361_0942190 | 3300039447 | Bacteria | 5676 |
| 92 | Ga0436361_1130805 | 3300039447 | Bacteria | 6565 |
| 93 | Ga0436361_1200719 | 3300039447 | Unclassified | 3788 |
| 94 | Ga0436363_0254374 | 3300039450 | Unclassified | 2541 |
| 95 | Ga0436363_0589965 | 3300039450 | Bacteria | 4545 |
| 96 | Ga0436363_0660615 | 3300039450 | Bacteria | 1021 |
| 97 | Ga0436363_1082016 | 3300039450 | Bacteria | 7230 |
| 98 | Ga0436363_1455598 | 3300039450 | Unclassified | 4684 |
| 99 | Ga0436363_1695920 | 3300039450 | Bacteria | 4991 |
| 100 | Ga0436362_0146308 | 3300039453 | Bacteria | 3101 |
| 101 | Ga0436362_0156967 | 3300039453 | Bacteria | 1065 |
| 102 | Ga0436362_0176387 | 3300039453 | Bacteria | 1022 |
| 103 | Ga0436362_0430963 | 3300039453 | Bacteria | 11359 |
| 104 | Ga0436362_0468829 | 3300039453 | Bacteria | 1125 |
| 105 | Ga0436362_0483101 | 3300039453 | Bacteria | 2177 |
| 106 | Ga0436362_0629886 | 3300039453 | Bacteria | 1068 |
| 107 | Ga0436362_0831369 | 3300039453 | Bacteria | 3996 |
| 108 | Ga0436362_0923148 | 3300039453 | Bacteria | 2263 |
| 109 | Ga0436362_1083080 | 3300039453 | Bacteria | 8368 |
| 110 | Ga0466965_0116015 | 3300044683 | Bacteria | 1380 |
| 111 | Ga0466966_0014899 | 3300044684 | Bacteria | 5145 |
| 112 | Ga0466963_0011407 | 3300044694 | Bacteria | 5412 |
| 113 | Ga0466957_0035847 | 3300044842 | Bacteria | 2978 |
| 114 | Ga0466967_0353563 | 3300045976 | Bacteria | 1423 |
| 115 | Ga0495604_0104367 | 3300047317 | Unclassified | 2077 |
| 116 | Ga0501202_002298 | 3300049652 | Bacteria | 3198 |
| 117 | Ga0207641_10616238 | |||
| 118 | Ga0070680_100263944 | |||
| 119 | Ga0070691_10046497 | |||
| 120 | Ga0070714_100036576 | |||
| 121 | Ga0070714_100043258 | |||
| 122 | Ga0070714_100050100 | |||
| 123 | Ga0070714_100632591 | |||
| 124 | Ga0070663_100102018 | |||
| 125 | Ga0070663_100146031 | |||
| 126 | Ga0070707_100116126 | |||
| 127 | Ga0070684_100169604 | |||
| 128 | Ga0068855_100000757 | |||
| 129 | Ga0068855_100008450 | |||
| 130 | Ga0068854_100000023 | |||
| 131 | Ga0068856_100008615 | |||
| 132 | Ga0068852_100202881 | |||
| 133 | Ga0105240_10065231 | |||
| 134 | Ga0114129_10466124 | |||
| 135 | Ga0157369_10262851 | |||
| 136 | Ga0157374_10011014 | |||
| 137 | Ga0157374_10110498 | |||
| 138 | Ga0206356_11580069 | |||
| 139 | Ga0213873_10000791 | |||
| 140 | Ga0213873_10002204 | |||
| 141 | Ga0213873_10006471 | |||
| 142 | Ga0213872_10009616 | |||
| 143 | Ga0213872_10021449 | |||
| 144 | Ga0213872_10036088 | |||
| 145 | Ga0213874_10009234 | |||
| 146 | Ga0213874_10070249 | |||
| 147 | Ga0213876_10012373 | |||
| 148 | Ga0213875_10000001 | |||
| 149 | Ga0213875_10001736 | |||
| 150 | Ga0213875_10030592 | |||
| 151 | Ga0213875_10036700 | |||
| 152 | Ga0213875_10053678 | |||
| 153 | Ga0213871_10002310 | |||
| 154 | Ga0207695_10165316 | |||
| 155 | Ga0207649_10144017 | |||
| 156 | Ga0207646_10155325 | |||
| 157 | Ga0207664_10174990 | |||
| 158 | Ga0207667_10000101 | |||
| 159 | Ga0207667_10003749 | |||
| 160 | Ga0207640_10000233 | |||
| 161 | Ga0207678_10029280 | |||
| 162 | Ga0207678_10059918 | |||
| 163 | Ga0207702_10007627 | |||
| 164 | Ga0207698_10059636 | |||
| 165 | Ga0265356_1000022 | |||
| 166 | Ga0265334_10033902 | |||
| 167 | Ga0265338_10000170 | |||
| 168 | Ga0265762_1012989 | |||
| 169 | Ga0265770_1001415 | |||
| 170 | Ga0265760_10001662 | |||
| 171 | Ga0265325_10000069 | |||
| 172 | Ga0265329_10016204 | |||
| 173 | Ga0265340_10131090 | |||
| 174 | Ga0265340_10138477 | |||
| 175 | Ga0265339_10003581 | |||
| 176 | Ga0265327_10024428 | |||
| 177 | Ga0265313_10000130 | |||
| 178 | Ga0265314_10092934 | |||
| 179 | Ga0265342_10005100 | |||
| 180 | Ga0265342_10030649 | |||
| 181 | Ga0395899_0003852 | |||
| 182 | Ga0395900_0319816 | |||
| 183 | Ga0395898_0022150 | |||
| 184 | Ga0436364_0207181 | |||
| 185 | Ga0436364_0273345 | |||
| 186 | Ga0436364_0648457 | |||
| 187 | Ga0436364_0691245 | |||
| 188 | Ga0436364_0853581 | |||
| 189 | Ga0436364_0853777 | |||
| 190 | Ga0436364_0899639 | |||
| 191 | Ga0436364_0943736 | |||
| 192 | Ga0436364_1515982 | |||
| 193 | Ga0436364_1516378 | |||
| 194 | Ga0395901_0019286 | |||
| 195 | Ga0436365_0127948 | |||
| 196 | Ga0436360_0048139 | |||
| 197 | Ga0436360_0369475 | |||
| 198 | Ga0436360_0389145 | |||
| 199 | Ga0436360_0567886 | |||
| 200 | Ga0436360_0708621 | |||
| 201 | Ga0436360_1262413 | |||
| 202 | Ga0436361_0041996 | |||
| 203 | Ga0436361_0044179 | |||
| 204 | Ga0436361_0075444 | |||
| 205 | Ga0436361_0676948 | |||
| 206 | Ga0436361_0743818 | |||
| 207 | Ga0436361_0942190 | |||
| 208 | Ga0436361_1130805 | |||
| 209 | Ga0436361_1200719 | |||
| 210 | Ga0436363_0254374 | |||
| 211 | Ga0436363_0589965 | |||
| 212 | Ga0436363_0660615 | |||
| 213 | Ga0436363_1082016 | |||
| 214 | Ga0436363_1455598 | |||
| 215 | Ga0436363_1695920 | |||
| 216 | Ga0436362_0146308 | |||
| 217 | Ga0436362_0156967 | |||
| 218 | Ga0436362_0176387 | |||
| 219 | Ga0436362_0430963 | |||
| 220 | Ga0436362_0468829 | |||
| 221 | Ga0436362_0483101 | |||
| 222 | Ga0436362_0629886 | |||
| 223 | Ga0436362_0831369 | |||
| 224 | Ga0436362_0923148 | |||
| 225 | Ga0436362_1083080 | |||
| 226 | Ga0466965_0116015 | |||
| 227 | Ga0466966_0014899 | |||
| 228 | Ga0466963_0011407 | |||
| 229 | Ga0466957_0035847 | |||
| 230 | Ga0466967_0353563 | |||
| 231 | Ga0495604_0104367 | |||
| 232 | Ga0501202_002298 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1xnh-assembly1.cif.gz_A-2 | crystal structure of nh3-dependent nad+ synthetase from helicobacter pylori | 0.8685 | 21 | 264 |
| 1xnh-assembly1.cif.gz_A-2 | crystal structure of nh3-dependent nad+ synthetase from helicobacter pylori | 0.842 | 21 | 264 |
| 3p52-assembly1.cif.gz_B | nh3-dependent nad synthetase from campylobacter jejuni subsp. jejuni nctc 11168 in complex with the nitrate ion | 0.8325 | 18 | 264 |
| 2e18-assembly1.cif.gz_B | crystal structure of project ph0182 from pyrococcus horikoshii ot3 | 0.8306 | 18 | 274 |
| 3p52-assembly1.cif.gz_B | nh3-dependent nad synthetase from campylobacter jejuni subsp. jejuni nctc 11168 in complex with the nitrate ion | 0.8187 | 18 | 264 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1xnhA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8798 | 21 | 260 | 3.40.50.620 |
| 3n05B02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8601 | 20 | 197 | 3.40.50.620 |
| 1xnhA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8592 | 21 | 260 | 3.40.50.620 |
| af_Q58747_4_258_3.40.50.620 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8549 | 17 | 265 | 3.40.50.620 |
| 3fiuC00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8385 | 18 | 265 | 3.40.50.620 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A528GWI5-F1-model_v4 | NAD(+) synthase (EC 6.3.1.5) | 0.9713 | 18 | 116 |
GO:0008795
|
| AF-A0A661T9R9-F1-model_v4 | NAD(+) synthase (EC 6.3.1.5) | 0.9696 | 18 | 115 |
GO:0008795
|
| AF-A0A7X8ZXU2-F1-model_v4 | NAD(+) synthase (EC 6.3.1.5) | 0.9691 | 19 | 116 |
GO:0008795
|
| AF-A0A388TJ16-F1-model_v4 | NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) | 0.9674 | 18 | 150 |
GO:0003952
GO:0004359 GO:0005524 GO:0005737 GO:0008795 GO:0009435 |
| AF-A0A6B3FD40-F1-model_v4 | NAD(+) synthase (EC 6.3.1.5) | 0.9604 | 24 | 139 |
GO:0003952
GO:0004359 GO:0005524 GO:0005737 GO:0008795 GO:0009435 |