F086184

General Info

Members Datasets Scaffolds Average Seq Length
116 97 232 392

Family's Representative Sequence

Representative Sequence 3300002067|JGI24735J21928_10018651|JGI24735J21928_100186512
Length 440
Sequence MSTRDQYLIGDGGDVLEATRVDSDEWVTFRQSFRRLRMRNSIETSVVTTGASSLGCPMELTILMPCLNERETLAVCIDKAKEFFASFKIEGEVLIADNGSTDGSIEIAETHGARVTHVPVRGYGAALSRGIAAARGRFVIMGDSDDSYDFQRLGNFVEKLRQGYDLVMGNRFKGGIAPGAMPFLHRYLGNPVLSFIGRLFFNIPIGDFHCGLRGFNRDSMLSLELNTRGMEFASEMVVKAALAGYRIAEVPTTLSKDGRSRPPHLRTWRDGWRHLRFLLIFCPRWLFFYPGIAITSIGLLLTLLALPGPVQITPSVSLDVHTVVVGCLSVLIGTQCVGFSIVARKYGALRGLLPADYRMKGLATALTLERILMLAGILLACGLAGGGYAIHVWVKAHLGPLPYGELVRVLIISGTAIALALELAFTSFLSTVLEMDMPTQ

Samples

Sample ID Description Type Environment
1 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
43 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
45 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
46 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
47 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
56 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
57 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
60 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
61 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
62 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
63 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
71 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
72 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
75 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
76 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
77 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
80 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
83 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
84 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
87 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
88 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
89 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
92 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
93 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
94 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
95 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
96 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
97 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 99.14
Metatranscriptomes 0
Isolates 0.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.62
Nodule 0
Rhizoplane 4.31
Rhizosphere 81.03
Stem 0
Stem Tuber 0
Unclassified 7.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10018651 3300002067 Unclassified 2138
2 JGI24748J21848_1000038 3300002074 Bacteria 69882
3 JGI25162J39368_1000403 3300002737 Bacteria 35711
4 JGI25164J39214_1000360 3300002772 Bacteria 27828
5 JGI25165J46597_1000419 3300003214 Bacteria 43972
6 rootH2_10015099 3300003320 Bacteria 23718
7 rootH2_10018844 3300003320 Bacteria 22280
8 rootH1_10051895 3300003323 Bacteria 3028
9 rootH1_10261121 3300003323 Bacteria 3361
10 Ga0065704_10100826 3300005289 Bacteria 2257
11 Ga0070675_100000035 3300005354 Bacteria 86571
12 Ga0070671_100027105 3300005355 Bacteria 4714
13 Ga0070709_10158868 3300005434 Bacteria 1570
14 Ga0070714_100025649 3300005435 Bacteria 4866
15 Ga0070708_100153579 3300005445 Bacteria 2142
16 Ga0070678_100016663 3300005456 Bacteria 4707
17 Ga0070706_100022194 3300005467 Bacteria 5844
18 Ga0070698_100001414 3300005471 Bacteria 26599
19 Ga0070698_100012306 3300005471 Bacteria 9060
20 Ga0070697_100008780 3300005536 Bacteria 7891
21 Ga0068853_100216329 3300005539 Bacteria 1748
22 Ga0068856_100193983 3300005614 Bacteria 2045
23 Ga0068859_100439356 3300005617 Bacteria 1401
24 Ga0068864_100043129 3300005618 Bacteria 3862
25 Ga0068863_100007799 3300005841 Bacteria 10469
26 Ga0081455_10001334 3300005937 Bacteria 30523
27 Ga0081540_1028599 3300005983 Bacteria 3126
28 Ga0075365_10000300 3300006038 Bacteria 17257
29 Ga0070712_100134341 3300006175 Bacteria 1879
30 Ga0075428_100001394 3300006844 Bacteria 25716
31 Ga0075428_100208545 3300006844 Bacteria 2112
32 Ga0075436_100001860 3300006914 Bacteria 14481
33 Ga0097620_100439286 3300006931 Bacteria 1401
34 Ga0075435_100112813 3300007076 Bacteria 2262
35 Ga0075435_100204336 3300007076 Bacteria 1674
36 Ga0105251_10002776 3300009011 Bacteria 13318
37 Ga0111539_10360875 3300009094 Bacteria 1691
38 Ga0114129_10005315 3300009147 Bacteria 18171
39 Ga0114129_10063945 3300009147 Bacteria 5135
40 Ga0114129_10188663 3300009147 Bacteria 2801
41 Ga0105248_10008058 3300009177 Bacteria 11567
42 Ga0105249_10315202 3300009553 Unclassified 1574
43 Ga0157371_10100023 3300013102 Bacteria 2056
44 Ga0157374_10002003 3300013296 Bacteria 17113
45 Ga0157374_10158977 3300013296 Unclassified 2201
46 Ga0157378_10000984 3300013297 Bacteria 26070
47 Ga0163163_10004409 3300014325 Bacteria 11996
48 Ga0163163_10138417 3300014325 Bacteria 2476
49 Ga0182008_10027690 3300014497 Bacteria 2869
50 Ga0157379_10026124 3300014968 Bacteria 5195
51 Ga0182007_10011791 3300015262 Bacteria 3387
52 Ga0207427_100078 3300025231 Bacteria 147526
53 Ga0209437_100090 3300025233 Bacteria 247138
54 Ga0209759_1010699 3300025256 Bacteria 2669
55 Ga0209233_1000077 3300025261 Bacteria 349570
56 Ga0207710_10000001 3300025900 Bacteria 1797433
57 Ga0207693_10141138 3300025915 Bacteria 1894
58 Ga0207659_10000384 3300025926 Bacteria 26630
59 Ga0207644_10003370 3300025931 Bacteria 10315
60 Ga0207665_10086185 3300025939 Bacteria 2169
61 Ga0207665_10178249 3300025939 Bacteria 1538
62 Ga0207703_10000286 3300026035 Bacteria 55964
63 Ga0207676_10063367 3300026095 Bacteria 2936
64 Ga0268265_10159513 3300028380 Bacteria 1914
65 Ga0265323_10000610 3300028653 Bacteria 19707
66 Ga0265330_10011705 3300031235 Bacteria 4110
67 Ga0265340_10029504 3300031247 Unclassified 2754
68 Ga0265316_10002685 3300031344 Bacteria 18326
69 Ga0265316_10019589 3300031344 Bacteria 5781
70 Ga0265316_10021556 3300031344 Bacteria 5453
71 Ga0307415_100198496 3300032126 Bacteria 1590
72 Ga0373954_0016986 3300035118 Bacteria 3264
73 Ga0373955_0009903 3300035172 Bacteria 4486
74 Ga0373933_0076352 3300035724 Bacteria 2046
75 Ga0373937_0006379 3300036401 Bacteria 10177
76 Ga0373937_0020792 3300036401 Bacteria 5887
77 Ga0395899_0001652 3300037312 Bacteria 18599
78 Ga0395900_0014592 3300037418 Bacteria 8015
79 Ga0395898_0002627 3300037466 Bacteria 20893
80 Ga0395898_0132177 3300037466 Bacteria 2390
81 Ga0395901_0002637 3300038443 Bacteria 18137
82 Ga0395901_0156286 3300038443 Bacteria 2395
83 Ga0395901_0482382 3300038443 Bacteria 1264
84 Ga0451577_0179092 3300042876 Bacteria 1911
85 Ga0466966_0190340 3300044684 Bacteria 1243
86 Ga0453684_0015009 3300044712 Bacteria 12298
87 Ga0453684_0023288 3300044712 Bacteria 9133
88 Ga0466959_0088301 3300045049 Bacteria 2229
89 Ga0451576_0000075 3300045051 Bacteria 247981
90 Ga0451576_0024023 3300045051 Bacteria 6588
91 Ga0466967_0208305 3300045976 Bacteria 1854
92 Ga0495590_0000847 3300046457 Bacteria 13825
93 Ga0495651_0024764 3300046462 Bacteria 4669
94 Ga0495652_0021117 3300046529 Bacteria 5788
95 Ga0495640_0057786 3300046533 Bacteria 2647
96 Ga0495667_0152079 3300046559 Bacteria 1490
97 Ga0495683_0006016 3300047323 Bacteria 6665
98 Ga0495675_0025900 3300047444 Bacteria 3737
99 Ga0495684_0005567 3300047471 Bacteria 9814
100 Ga0496100_0019673 3300048903 Unclassified 4033
101 Ga0496102_0010210 3300048905 Bacteria 8070
102 Ga0496103_0025861 3300048906 Unclassified 3550
103 Ga0496112_0096350 3300048915 Bacteria 2929
104 Ga0496117_0104194 3300048920 Unclassified 1786
105 Ga0496125_0071312 3300048928 Unclassified 2715
106 Ga0501083_0085052 3300049744 Bacteria 2093
107 nmdc:mga0yw44_234_c1 3300050492 Bacteria 18938
108 nmdc:mga05p37_424_c1 3300050507 Bacteria 45662
109 nmdc:mga06r32_60447_c1 3300050510 Bacteria 3646
110 nmdc:mga0n895_338895_c1 3300050512 Bacteria 1523
111 nmdc:mga08x19_40169_c1 3300050514 Unclassified 2977
112 Ga0495619_0001924 3300053085 Bacteria 13842
113 Ga0495619_0048856 3300053085 Bacteria 2788
114 Ga0500646_0000289 3300053090 Bacteria 15420
115 Ga0500583_0005262 3300053092 Bacteria 4318
116 2787435847 2786546517 Bacteria 6614109
117 JGI24735J21928_10018651
118 JGI24748J21848_1000038
119 JGI25162J39368_1000403
120 JGI25164J39214_1000360
121 JGI25165J46597_1000419
122 rootH2_10015099
123 rootH2_10018844
124 rootH1_10051895
125 rootH1_10261121
126 Ga0065704_10100826
127 Ga0070675_100000035
128 Ga0070671_100027105
129 Ga0070709_10158868
130 Ga0070714_100025649
131 Ga0070708_100153579
132 Ga0070678_100016663
133 Ga0070706_100022194
134 Ga0070698_100001414
135 Ga0070698_100012306
136 Ga0070697_100008780
137 Ga0068853_100216329
138 Ga0068856_100193983
139 Ga0068859_100439356
140 Ga0068864_100043129
141 Ga0068863_100007799
142 Ga0081455_10001334
143 Ga0081540_1028599
144 Ga0075365_10000300
145 Ga0070712_100134341
146 Ga0075428_100001394
147 Ga0075428_100208545
148 Ga0075436_100001860
149 Ga0097620_100439286
150 Ga0075435_100112813
151 Ga0075435_100204336
152 Ga0105251_10002776
153 Ga0111539_10360875
154 Ga0114129_10005315
155 Ga0114129_10063945
156 Ga0114129_10188663
157 Ga0105248_10008058
158 Ga0105249_10315202
159 Ga0157371_10100023
160 Ga0157374_10002003
161 Ga0157374_10158977
162 Ga0157378_10000984
163 Ga0163163_10004409
164 Ga0163163_10138417
165 Ga0182008_10027690
166 Ga0157379_10026124
167 Ga0182007_10011791
168 Ga0207427_100078
169 Ga0209437_100090
170 Ga0209759_1010699
171 Ga0209233_1000077
172 Ga0207710_10000001
173 Ga0207693_10141138
174 Ga0207659_10000384
175 Ga0207644_10003370
176 Ga0207665_10086185
177 Ga0207665_10178249
178 Ga0207703_10000286
179 Ga0207676_10063367
180 Ga0268265_10159513
181 Ga0265323_10000610
182 Ga0265330_10011705
183 Ga0265340_10029504
184 Ga0265316_10002685
185 Ga0265316_10019589
186 Ga0265316_10021556
187 Ga0307415_100198496
188 Ga0373954_0016986
189 Ga0373955_0009903
190 Ga0373933_0076352
191 Ga0373937_0006379
192 Ga0373937_0020792
193 Ga0395899_0001652
194 Ga0395900_0014592
195 Ga0395898_0002627
196 Ga0395898_0132177
197 Ga0395901_0002637
198 Ga0395901_0156286
199 Ga0395901_0482382
200 Ga0451577_0179092
201 Ga0466966_0190340
202 Ga0453684_0015009
203 Ga0453684_0023288
204 Ga0466959_0088301
205 Ga0451576_0000075
206 Ga0451576_0024023
207 Ga0466967_0208305
208 Ga0495590_0000847
209 Ga0495651_0024764
210 Ga0495652_0021117
211 Ga0495640_0057786
212 Ga0495667_0152079
213 Ga0495683_0006016
214 Ga0495675_0025900
215 Ga0495684_0005567
216 Ga0496100_0019673
217 Ga0496102_0010210
218 Ga0496103_0025861
219 Ga0496112_0096350
220 Ga0496117_0104194
221 Ga0496125_0071312
222 Ga0501083_0085052
223 nmdc:mga0yw44_234_c1
224 nmdc:mga05p37_424_c1
225 nmdc:mga06r32_60447_c1
226 nmdc:mga0n895_338895_c1
227 nmdc:mga08x19_40169_c1
228 Ga0495619_0001924
229 Ga0495619_0048856
230 Ga0500646_0000289
231 Ga0500583_0005262
232 2787435847

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

61

222

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ckj-assembly1.cif.gz_A crystal structure of a mycobacterial protein 0.7855 58 282
3ckq-assembly1.cif.gz_A-2 crystal structure of a mycobacterial protein 0.7725 58 282
3e25-assembly1.cif.gz_A-2 crystal structure of m. tuberculosis glucosyl-3-phosphoglycerate synthase 0.7603 58 282
6p61-assembly3.cif.gz_C structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.7533 59 254
7qcp-assembly1.cif.gz_A crystal structure of mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at ph 7.2 - apo form 0.7483 58 282
ID Description Score Start End Superfamily
af_P9WMY1_2_214_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9212 56 275 3.90.550.10
af_P9WMY1_2_214_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9005 56 275 3.90.550.10
af_A4ICW5_2_228_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8306 59 278 3.90.550.10
af_O53493_586_855_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8079 43 277 3.90.550.10
af_A4ICW5_2_228_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8036 59 278 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A0B8QD23-F1-model_v4 Dolichol-p-glucose synthetase 0.9912 53 153
AF-A0A2D6IWD7-F1-model_v4 Dolichol-P-glucose synthetase 0.9669 54 189 GO:0016757
AF-A0A2D6IWD7-F1-model_v4 Dolichol-P-glucose synthetase 0.96 54 189 GO:0016757
AF-A0A0B8QD23-F1-model_v4 Dolichol-p-glucose synthetase 0.9535 53 153
AF-X0XH73-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.9515 121 281 GO:0016757

Map