F084134

General Info

Members Datasets Scaffolds Average Seq Length
115 54 115 289

Family's Representative Sequence

Representative Sequence 3300028556|Ga0265337_1000128|Ga0265337_100012838
Length 326
Sequence VTVLEAIQKSTEFLAKKGVESPRLQTELLLAHLLKLPRMKLYLNFERSLGPAEVDDLRDFVKRRAQREPLQHITGSTSFCGFEITVNRHVLIPRPETEMLAELGWQFLNQLSEGRAPNSTENENGASQSSALRALDFGTGSGCIAIALAAKCPSAKIVATDVSPDALSMAKDNAARNHVTERIDFLRSDGFLALSSRWGERPREPEATANDGLPEVSPHQFDLIISNPPYIPSAEIGTLQPEVRNFDPPGALDGGPDGLDFYRLLATGTKPFLKPDGKIMLEFGDGQAGAIGNIFATEKWIVEAVREDYSHRERFLIAKPPSSLSA

Samples

Sample ID Description Type Environment
1 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
2 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
3 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
4 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
5 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
6 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
7 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
8 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
9 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
10 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
11 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
12 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
14 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
15 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
16 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
17 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
18 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
19 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
20 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
21 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
22 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
23 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
24 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
25 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
26 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
27 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
28 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
29 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
30 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
31 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
32 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
33 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
34 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
35 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
36 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
37 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
38 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
39 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
40 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
41 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
42 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
43 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
44 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
45 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
46 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
47 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
48 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
49 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
50 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
51 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
52 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
53 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
54 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.87
Nodule 0
Rhizoplane 0
Rhizosphere 99.13
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070691_10022511 3300005341 Bacteria 2924
2 Ga0070714_100076334 3300005435 Bacteria 2909
3 Ga0070711_100005680 3300005439 Bacteria 7477
4 Ga0070681_10100031 3300005458 Bacteria 2845
5 Ga0070707_100366202 3300005468 Bacteria 1400
6 Ga0068855_100155596 3300005563 Bacteria 2597
7 Ga0068856_100005704 3300005614 Bacteria 12262
8 Ga0105240_10001096 3300009093 Bacteria 47799
9 Ga0105237_10667227 3300009545 Bacteria 1046
10 Ga0105238_10567080 3300009551 Bacteria 1141
11 Ga0157370_10123981 3300013104 Bacteria 2412
12 Ga0207663_10029016 3300025916 Bacteria 3245
13 Ga0207702_10003162 3300026078 Bacteria 15239
14 Ga0207702_10173843 3300026078 Unclassified 1977
15 Ga0265337_1000092 3300028556 Bacteria 44204
16 Ga0265337_1000128 3300028556 Bacteria 38151
17 Ga0265337_1004667 3300028556 Bacteria 5633
18 Ga0265337_1010607 3300028556 Bacteria 3216
19 Ga0265337_1046426 3300028556 Unclassified 1233
20 Ga0265326_10015225 3300028558 Unclassified 2234
21 Ga0265319_1000003 3300028563 Bacteria 340561
22 Ga0265319_1088808 3300028563 Bacteria 976
23 Ga0265334_10013641 3300028573 Bacteria 3401
24 Ga0265318_10032846 3300028577 Bacteria 2006
25 Ga0265323_10001762 3300028653 Bacteria 10277
26 Ga0265323_10012200 3300028653 Bacteria 3451
27 Ga0265323_10048171 3300028653 Unclassified 1522
28 Ga0265322_10003331 3300028654 Bacteria 4869
29 Ga0265322_10011840 3300028654 Bacteria 2523
30 Ga0265336_10005299 3300028666 Bacteria 4774
31 Ga0265336_10007645 3300028666 Bacteria 3836
32 Ga0265336_10035195 3300028666 Unclassified 1545
33 Ga0265338_10000062 3300028800 Bacteria 196060
34 Ga0265338_10000283 3300028800 Bacteria 91383
35 Ga0265338_10000494 3300028800 Bacteria 70344
36 Ga0265338_10000525 3300028800 Bacteria 67650
37 Ga0265338_10000742 3300028800 Bacteria 55600
38 Ga0265338_10002885 3300028800 Bacteria 25064
39 Ga0265338_10003117 3300028800 Bacteria 23719
40 Ga0265338_10003649 3300028800 Bacteria 21440
41 Ga0265338_10003885 3300028800 Bacteria 20670
42 Ga0265338_10004075 3300028800 Bacteria 20013
43 Ga0265338_10004402 3300028800 Bacteria 19060
44 Ga0265338_10005287 3300028800 Bacteria 16901
45 Ga0265338_10010565 3300028800 Bacteria 10799
46 Ga0265338_10013966 3300028800 Bacteria 9007
47 Ga0265338_10034298 3300028800 Bacteria 4908
48 Ga0265338_10035173 3300028800 Bacteria 4822
49 Ga0265338_10085992 3300028800 Unclassified 2619
50 Ga0265338_10088152 3300028800 Bacteria 2576
51 Ga0265338_10091031 3300028800 Bacteria 2522
52 Ga0265338_10096393 3300028800 Bacteria 2427
53 Ga0265338_10140323 3300028800 Unclassified 1894
54 Ga0265338_10288522 3300028800 Bacteria 1196
55 Ga0265338_10385143 3300028800 Bacteria 1002
56 Ga0265324_10000199 3300029957 Bacteria 45762
57 Ga0265324_10013218 3300029957 Bacteria 3085
58 Ga0265324_10015655 3300029957 Bacteria 2786
59 Ga0265324_10032108 3300029957 Bacteria 1836
60 Ga0265324_10061544 3300029957 Bacteria 1282
61 Ga0265332_10014226 3300031238 Bacteria 3521
62 Ga0265332_10037586 3300031238 Bacteria 2099
63 Ga0265328_10005612 3300031239 Bacteria 5364
64 Ga0265328_10051075 3300031239 Unclassified 1518
65 Ga0265320_10000363 3300031240 Bacteria 36831
66 Ga0265320_10000893 3300031240 Bacteria 22450
67 Ga0265320_10017029 3300031240 Bacteria 4050
68 Ga0265320_10019622 3300031240 Bacteria 3691
69 Ga0265325_10019802 3300031241 Bacteria 3715
70 Ga0265340_10015265 3300031247 Bacteria 3995
71 Ga0265340_10068169 3300031247 Bacteria 1690
72 Ga0265339_10007696 3300031249 Bacteria 6930
73 Ga0265331_10098903 3300031250 Bacteria 1344
74 Ga0265327_10002135 3300031251 Bacteria 21837
75 Ga0265327_10079567 3300031251 Bacteria 1622
76 Ga0265327_10090627 3300031251 Bacteria 1492
77 Ga0265316_10011478 3300031344 Bacteria 7984
78 Ga0265316_10017710 3300031344 Bacteria 6144
79 Ga0265316_10025976 3300031344 Bacteria 4879
80 Ga0265316_10092801 3300031344 Bacteria 2301
81 Ga0265316_10135563 3300031344 Bacteria 1852
82 Ga0265316_10240983 3300031344 Unclassified 1330
83 Ga0265313_10001510 3300031595 Bacteria 21673
84 Ga0265313_10002291 3300031595 Bacteria 16778
85 Ga0265314_10000210 3300031711 Bacteria 86377
86 Ga0265314_10026388 3300031711 Bacteria 4365
87 Ga0265314_10147367 3300031711 Bacteria 1448
88 Ga0265342_10035424 3300031712 Bacteria 3055
89 Ga0265342_10054093 3300031712 Unclassified 2387
90 Ga0265342_10134686 3300031712 Bacteria 1382
91 Ga0265342_10181970 3300031712 Bacteria 1151
92 Ga0451577_0000967 3300042876 Bacteria 42024
93 Ga0451577_0064986 3300042876 Unclassified 3254
94 Ga0453684_0093822 3300044712 Bacteria 3695
95 Ga0453684_0107625 3300044712 Bacteria 3394
96 Ga0451576_0107480 3300045051 Bacteria 2903
97 Ga0451576_0158902 3300045051 Bacteria 2358
98 Ga0495592_0001462 3300046454 Bacteria 16417
99 Ga0495618_0012881 3300046514 Bacteria 5082
100 Ga0495628_0000099 3300046516 Bacteria 69768
101 Ga0495630_0138227 3300046517 Bacteria 1852
102 Ga0495666_0039203 3300046526 Bacteria 2301
103 Ga0495652_0086472 3300046529 Bacteria 2574
104 Ga0495640_0029907 3300046533 Bacteria 3904
105 Ga0495586_0000757 3300046535 Bacteria 18537
106 Ga0495599_0010410 3300046678 Bacteria 5689
107 Ga0495624_0027580 3300046690 Bacteria 3718
108 Ga0495674_0009904 3300047319 Bacteria 9040
109 Ga0501031_0142669 3300049568 Bacteria 1565
110 Ga0501032_0093213 3300049569 Bacteria 1997
111 Ga0501035_0019333 3300049822 Bacteria 6266
112 Ga0501035_0137206 3300049822 Bacteria 2129
113 Ga0501044_0007400 3300049823 Bacteria 12077
114 Ga0501044_0319644 3300049823 Bacteria 1477
115 Ga0500636_0151945 3300053177 Bacteria 1271

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028563 Ga0265319_1000003 Ga0265319_100000374 239
2 3300031240 Ga0265320_10019622 Ga0265320_100196222 239
3 3300031595 Ga0265313_10001510 Ga0265313_100015106 239
4 3300005458 Ga0070681_10100031 Ga0070681_101000312 249
5 3300028573 Ga0265334_10013641 Ga0265334_100136413 250
6 3300028666 Ga0265336_10007645 Ga0265336_100076453 251
7 3300029957 Ga0265324_10015655 Ga0265324_100156552 251
8 3300049568 Ga0501031_0142669 Ga0501031_0142669_361_1227 253
9 3300049822 Ga0501035_0019333 Ga0501035_0019333_5182_6048 253
10 3300028800 Ga0265338_10034298 Ga0265338_100342982 254
11 3300028800 Ga0265338_10003117 Ga0265338_100031173 255
12 3300026078 Ga0207702_10173843 Ga0207702_101738432 257
13 3300009551 Ga0105238_10567080 Ga0105238_105670801 260
14 3300045051 Ga0451576_0107480 Ga0451576_0107480_1277_2137 261
15 3300046516 Ga0495628_0000099 Ga0495628_0000099_68627_69511 263
16 3300046678 Ga0495599_0010410 Ga0495599_0010410_4261_5133 263
17 3300028800 Ga0265338_10091031 Ga0265338_100910312 265
18 3300031250 Ga0265331_10098903 Ga0265331_100989032 265
19 3300031251 Ga0265327_10002135 Ga0265327_100021359 265
20 3300028577 Ga0265318_10032846 Ga0265318_100328463 267
21 3300028800 Ga0265338_10288522 Ga0265338_102885221 267
22 3300031344 Ga0265316_10017710 Ga0265316_100177104 267
23 3300031711 Ga0265314_10026388 Ga0265314_100263882 267
24 3300031344 Ga0265316_10135563 Ga0265316_101355632 268
25 3300031712 Ga0265342_10181970 Ga0265342_101819701 269
26 3300044712 Ga0453684_0093822 Ga0453684_0093822_193_1056 269
27 3300028556 Ga0265337_1004667 Ga0265337_10046674 270
28 3300028558 Ga0265326_10015225 Ga0265326_100152252 270
29 3300028563 Ga0265319_1088808 Ga0265319_10888081 270
30 3300028653 Ga0265323_10048171 Ga0265323_100481712 270
31 3300028800 Ga0265338_10004075 Ga0265338_1000407512 270
32 3300029957 Ga0265324_10013218 Ga0265324_100132182 270
33 3300031239 Ga0265328_10051075 Ga0265328_100510752 270
34 3300031241 Ga0265325_10019802 Ga0265325_100198024 270
35 3300031249 Ga0265339_10007696 Ga0265339_100076966 270
36 3300031344 Ga0265316_10025976 Ga0265316_100259764 270
37 3300031344 Ga0265316_10240983 Ga0265316_102409832 270
38 3300031595 Ga0265313_10002291 Ga0265313_1000229117 270
39 3300031712 Ga0265342_10035424 Ga0265342_100354242 270
40 3300053177 Ga0500636_0151945 Ga0500636_0151945_291_1139 270
41 3300031247 Ga0265340_10015265 Ga0265340_100152654 271
42 3300005563 Ga0068855_100155596 Ga0068855_1001555962 273
43 3300005614 Ga0068856_100005704 Ga0068856_1000057046 273
44 3300026078 Ga0207702_10003162 Ga0207702_1000316214 273
45 3300028800 Ga0265338_10003649 Ga0265338_100036499 275
46 3300031238 Ga0265332_10014226 Ga0265332_100142262 275
47 3300031240 Ga0265320_10000893 Ga0265320_100008933 275
48 3300031251 Ga0265327_10090627 Ga0265327_100906272 275
49 3300031712 Ga0265342_10054093 Ga0265342_100540932 275
50 3300028653 Ga0265323_10001762 Ga0265323_1000176210 277
51 3300028654 Ga0265322_10003331 Ga0265322_100033312 277
52 3300028800 Ga0265338_10088152 Ga0265338_100881523 277
53 3300031344 Ga0265316_10011478 Ga0265316_100114786 277
54 3300031712 Ga0265342_10134686 Ga0265342_101346862 277
55 3300046517 Ga0495630_0138227 Ga0495630_0138227_682_1527 277
56 3300005435 Ga0070714_100076334 Ga0070714_1000763342 278
57 3300046454 Ga0495592_0001462 Ga0495592_0001462_7069_7932 278
58 3300046514 Ga0495618_0012881 Ga0495618_0012881_3649_4512 278
59 3300046526 Ga0495666_0039203 Ga0495666_0039203_301_1164 278
60 3300046529 Ga0495652_0086472 Ga0495652_0086472_54_917 278
61 3300046533 Ga0495640_0029907 Ga0495640_0029907_1817_2680 278
62 3300046535 Ga0495586_0000757 Ga0495586_0000757_4036_4899 278
63 3300046690 Ga0495624_0027580 Ga0495624_0027580_1341_2204 278
64 3300047319 Ga0495674_0009904 Ga0495674_0009904_7091_7954 278
65 3300028800 Ga0265338_10000062 Ga0265338_1000006223 279
66 3300029957 Ga0265324_10000199 Ga0265324_1000019927 279
67 3300049569 Ga0501032_0093213 Ga0501032_0093213_570_1436 279
68 3300049823 Ga0501044_0007400 Ga0501044_0007400_1051_1917 279
69 3300005439 Ga0070711_100005680 Ga0070711_10000568010 280
70 3300005468 Ga0070707_100366202 Ga0070707_1003662021 280
71 3300025916 Ga0207663_10029016 Ga0207663_100290162 280
72 3300028556 Ga0265337_1010607 Ga0265337_10106074 280
73 3300028666 Ga0265336_10035195 Ga0265336_100351952 280
74 3300028800 Ga0265338_10000525 Ga0265338_1000052560 280
75 3300028800 Ga0265338_10002885 Ga0265338_1000288513 280
76 3300028800 Ga0265338_10004402 Ga0265338_1000440216 280
77 3300028800 Ga0265338_10010565 Ga0265338_100105652 280
78 3300028800 Ga0265338_10013966 Ga0265338_100139664 280
79 3300028800 Ga0265338_10035173 Ga0265338_100351732 280
80 3300028800 Ga0265338_10096393 Ga0265338_100963933 280
81 3300028800 Ga0265338_10140323 Ga0265338_101403232 280
82 3300028800 Ga0265338_10385143 Ga0265338_103851432 280
83 3300031240 Ga0265320_10000363 Ga0265320_1000036326 280
84 3300031240 Ga0265320_10017029 Ga0265320_100170291 280
85 3300031247 Ga0265340_10068169 Ga0265340_100681692 280
86 3300031344 Ga0265316_10092801 Ga0265316_100928013 280
87 3300031711 Ga0265314_10147367 Ga0265314_101473671 280
88 3300042876 Ga0451577_0064986 Ga0451577_0064986_433_1287 280
89 3300045051 Ga0451576_0158902 Ga0451576_0158902_1483_2337 280
90 3300049822 Ga0501035_0137206 Ga0501035_0137206_783_1694 280
91 3300049823 Ga0501044_0319644 Ga0501044_0319644_277_1182 280
92 3300028556 Ga0265337_1000092 Ga0265337_100009217 281
93 3300028800 Ga0265338_10005287 Ga0265338_1000528713 281
94 3300042876 Ga0451577_0000967 Ga0451577_0000967_39127_39996 281
95 3300044712 Ga0453684_0107625 Ga0453684_0107625_497_1366 281
96 3300009545 Ga0105237_10667227 Ga0105237_106672272 283
97 3300029957 Ga0265324_10061544 Ga0265324_100615442 283
98 3300013104 Ga0157370_10123981 Ga0157370_101239812 284
99 3300028556 Ga0265337_1046426 Ga0265337_10464262 284
100 3300028653 Ga0265323_10012200 Ga0265323_100122003 284
101 3300028800 Ga0265338_10003885 Ga0265338_1000388519 284
102 3300031238 Ga0265332_10037586 Ga0265332_100375862 284
103 3300031239 Ga0265328_10005612 Ga0265328_100056121 284
104 3300031711 Ga0265314_10000210 Ga0265314_1000021070 284
105 3300028800 Ga0265338_10000494 Ga0265338_1000049416 285
106 3300028800 Ga0265338_10000283 Ga0265338_1000028358 287
107 3300009093 Ga0105240_10001096 Ga0105240_1000109621 288
108 3300029957 Ga0265324_10032108 Ga0265324_100321082 290
109 3300005341 Ga0070691_10022511 Ga0070691_100225111 291
110 3300028556 Ga0265337_1000128 Ga0265337_100012838 291
111 3300028654 Ga0265322_10011840 Ga0265322_100118403 291
112 3300028666 Ga0265336_10005299 Ga0265336_100052993 291
113 3300028800 Ga0265338_10000742 Ga0265338_1000074253 291
114 3300028800 Ga0265338_10085992 Ga0265338_100859922 291
115 3300031251 Ga0265327_10079567 Ga0265327_100795672 291

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17827

PrmC_N

PrmC N-terminal domain

5

75

0.99

PF13649

Methyltransf_25

Methyltransferase domain

134

198

0.94

PF08241

Methyltransf_11

Methyltransferase domain

135

197

0.93

PF12847

Methyltransf_18

Methyltransferase domain

126

200

0.93

PF05175

MTS

Methyltransferase small domain

125

199

0.91

PF06325

PrmA

Ribosomal protein L11 methyltransferase (PrmA)

121

197

0.88

PF10294

Methyltransf_16

Lysine methyltransferase

101

189

0.83

PF13847

Methyltransf_31

Methyltransferase domain

128

310

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2nxe-assembly2.cif.gz_B t. thermophilus ribosomal protein l11 methyltransferase (prma) in complex with s-adenosyl-l-methionine 0.8774 94 291
2nxj-assembly1.cif.gz_A t.thermophilus ribosomal protein l11 methyltransferase (prma) in space group p 21 21 2 0.8738 92 289
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8717 89 290
3cjq-assembly1.cif.gz_A ribosomal protein l11 methyltransferase (prma) in complex with dimethylated ribosomal protein l11 in space group p212121 0.8697 94 291
3cjq-assembly2.cif.gz_D ribosomal protein l11 methyltransferase (prma) in complex with dimethylated ribosomal protein l11 in space group p212121 0.8495 94 291
ID Description Score Start End Superfamily
af_P0ACC1_1_83_1.10.8.10 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.9069 1 84 1.10.8.10
af_Q2FWE1_84_278_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8989 86 289 3.40.50.150
af_Q2FWE1_2_83_1.10.8.10 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.8947 1 83 1.10.8.10
2b3tA01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.8893 1 86 1.10.8.10
af_F1QJH5_134_342_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8877 90 289 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A6L7S950-F1-model_v4 peptide chain release factor N(5)-glutamine methyltransferase (EC 2.1.1.297) 0.9704 129 289 GO:0003676
GO:0032259
GO:0036009
AF-A0A7V9HZU3-F1-model_v4 Peptide chain release factor N(5)-glutamine methyltransferase 0.9639 165 291
AF-A0A7V3YL06-F1-model_v4 Peptide chain release factor N(5)-glutamine methyltransferase 0.9584 129 290 GO:0003676
GO:0008276
GO:0032259
AF-A0A660Y4S7-F1-model_v4 Peptide chain release factor N(5)-glutamine methyltransferase 0.9562 190 291 GO:0003676
GO:0008168
GO:0032259
AF-A0A354EAN8-F1-model_v4 deleted 0.9551 191 291

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pLDDT pTM Quality
88.04 0.77 High
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Predicted Structure (AlphaFold2)

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