F082895

General Info

Members Datasets Scaffolds Average Seq Length
115 88 115 702

Family's Representative Sequence

Representative Sequence 3300005718|Ga0068866_10009521|Ga0068866_100095212
Length 746
Sequence VNGHPEAAPDIRKLELLRVHYSILKSLSMLSPESLKRYSTTKSLLAVVLITQLCLTAFSQQVRITTNLVQVDAVVTDKNGKIVTDLKPDEIEIYEDGHKQKITNFSYFQAEPANTEPAAKSPAPDKTAVAPPVPVTRLRPEDVRRTIALVVDDLGLSWESIYYVRRALKKFVDEQMQPGDLVAIIRTSGGIGALQSFTSDKRQLYAAIERVKWNAIGRSGISAFAPIERPSGNQAIDEANAEANETREDMFAVGTLGAISYVVKGLKELPGRKSILLVSDGFRIYKFDDPRRDFMALERLRRLVDEAGRASVVIYTMNATGLQTLGLTAADDLTGRDASQIEEQMTNRRHAAYETQEGLDYLAHETGGMAIRNTNDLSSGIKRVLADQKGYYLIGYRPDSGTFDPRTGRRTFHKLSLKVTRPGKFTVRMRNGFYGVTDEDRQTVKKTLAQQLIGALVSPFGSTGVHLRLTSVFGNDQKYGSFMRSALYIDGRDLTFVETPEHRHKGVFDVLAMTFGDNGAAVDSSGKTFTVELTDEWYKRTQRDGLVYYVTVPIKKPGAYQLRVSLRDSGTERVGSASQFVEVPDIKKNRIALSGVTLSGSIERPPGTNGANGGAADAQKLPADDNDQLDQGDAEASPAVRRFRHGMLMDYVFFIYNARLDKATNQPNLTWQVKLFQGSKPVFEGKANGVDLTGQTDLKRLLTRGRIRLGNDLAPGEYVLQVIVTDALADEKHRTVSQWMDFEIIK

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
79 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
80 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
81 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
82 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
83 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
84 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
85 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
86 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
87 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
88 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.87
Nodule 0
Rhizoplane 0.87
Rhizosphere 96.52
Stem 0
Stem Tuber 0
Unclassified 1.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000008 3300002074 Bacteria 191483
2 JGI24034J26672_10000002 3300002239 Bacteria 925353
3 Ga0065704_10075589 3300005289 Bacteria 5514
4 Ga0065707_10085422 3300005295 Bacteria 6169
5 Ga0070690_100016913 3300005330 Bacteria 4378
6 Ga0068869_100002487 3300005334 Bacteria 11113
7 Ga0068869_100053491 3300005334 Unclassified 2936
8 Ga0070680_100000438 3300005336 Bacteria 28383
9 Ga0070668_100013308 3300005347 Bacteria 6139
10 Ga0070671_100033262 3300005355 Bacteria 4263
11 Ga0070703_10000099 3300005406 Bacteria 44651
12 Ga0070703_10000250 3300005406 Bacteria 26264
13 Ga0070701_10031354 3300005438 Bacteria 2637
14 Ga0070705_100000002 3300005440 Bacteria 137084
15 Ga0070694_100000191 3300005444 Bacteria 32126
16 Ga0070694_100038808 3300005444 Bacteria 3166
17 Ga0070662_100017812 3300005457 Unclassified 4793
18 Ga0070681_10000065 3300005458 Bacteria 76633
19 Ga0070681_10091027 3300005458 Unclassified 3001
20 Ga0068867_100062263 3300005459 Unclassified 2772
21 Ga0070706_100000066 3300005467 Bacteria 120884
22 Ga0070707_100007412 3300005468 Bacteria 10191
23 Ga0070698_100000096 3300005471 Bacteria 71007
24 Ga0070698_100002619 3300005471 Bacteria 19817
25 Ga0070699_100000011 3300005518 Bacteria 267738
26 Ga0070679_100000013 3300005530 Bacteria 151602
27 Ga0070697_100000209 3300005536 Bacteria 48151
28 Ga0070697_100020727 3300005536 Bacteria 5204
29 Ga0070686_100006377 3300005544 Bacteria 6550
30 Ga0070695_100031545 3300005545 Bacteria 3307
31 Ga0070696_100000007 3300005546 Bacteria 106778
32 Ga0070696_100025015 3300005546 Bacteria 4058
33 Ga0070693_100001139 3300005547 Bacteria 11925
34 Ga0068856_100011881 3300005614 Bacteria 8433
35 Ga0068859_100047391 3300005617 Bacteria 4318
36 Ga0068866_10009521 3300005718 Unclassified 4128
37 Ga0068861_100004288 3300005719 Bacteria 9565
38 Ga0068858_100000055 3300005842 Bacteria 118619
39 Ga0081539_10000063 3300005985 Bacteria 248201
40 Ga0070715_10000064 3300006163 Bacteria 33475
41 Ga0075428_100071115 3300006844 Unclassified 3803
42 Ga0075434_100004602 3300006871 Bacteria 12455
43 Ga0075434_100034154 3300006871 Unclassified 5021
44 Ga0075434_100051293 3300006871 Bacteria 4100
45 Ga0068865_100021763 3300006881 Unclassified 4174
46 Ga0075436_100000194 3300006914 Bacteria 37539
47 Ga0097620_100047391 3300006931 Bacteria 4318
48 Ga0099794_10004884 3300007265 Bacteria 5328
49 Ga0099794_10008791 3300007265 Bacteria 4208
50 Ga0105240_10032997 3300009093 Bacteria 6694
51 Ga0111539_10088776 3300009094 Unclassified 3632
52 Ga0105245_10126622 3300009098 Unclassified 2392
53 Ga0105247_10000001 3300009101 Bacteria 739726
54 Ga0114129_10074490 3300009147 Bacteria 4729
55 Ga0105243_10000019 3300009148 Bacteria 217107
56 Ga0105243_10043701 3300009148 Unclassified 3512
57 Ga0105242_10000007 3300009176 Bacteria 177073
58 Ga0105242_10004220 3300009176 Bacteria 11202
59 Ga0105248_10002118 3300009177 Bacteria 21949
60 Ga0105248_10056927 3300009177 Bacteria 4387
61 Ga0105249_10000686 3300009553 Bacteria 30797
62 Ga0105249_10026270 3300009553 Bacteria 5245
63 Ga0105249_10030538 3300009553 Bacteria 4872
64 Ga0157378_10000176 3300013297 Bacteria 60614
65 Ga0157378_10013420 3300013297 Bacteria 7162
66 Ga0157378_10036034 3300013297 Unclassified 4378
67 Ga0163162_10000714 3300013306 Bacteria 30817
68 Ga0163162_10028718 3300013306 Bacteria 5506
69 Ga0163162_10030192 3300013306 Bacteria 5371
70 Ga0163162_10057403 3300013306 Unclassified 3921
71 Ga0157372_10073454 3300013307 Bacteria 3855
72 Ga0157375_10001758 3300013308 Bacteria 18593
73 Ga0157380_10009335 3300014326 Bacteria 7025
74 Ga0157380_10017107 3300014326 Bacteria 5361
75 Ga0157380_10023618 3300014326 Bacteria 4641
76 Ga0163161_10020596 3300017792 Unclassified 4630
77 Ga0207653_10000077 3300025885 Bacteria 72458
78 Ga0207653_10000213 3300025885 Bacteria 38963
79 Ga0207642_10004354 3300025899 Bacteria 4564
80 Ga0207710_10000003 3300025900 Bacteria 1071597
81 Ga0207685_10000056 3300025905 Bacteria 34032
82 Ga0207645_10025750 3300025907 Unclassified 3805
83 Ga0207684_10000120 3300025910 Bacteria 144506
84 Ga0207707_10000004 3300025912 Bacteria 391281
85 Ga0207695_10039306 3300025913 Bacteria 5086
86 Ga0207660_10003078 3300025917 Bacteria 10903
87 Ga0207652_10000122 3300025921 Bacteria 85075
88 Ga0207644_10000257 3300025931 Bacteria 35725
89 Ga0207706_10063671 3300025933 Unclassified 3246
90 Ga0207686_10000002 3300025934 Bacteria 453961
91 Ga0207686_10000177 3300025934 Bacteria 49115
92 Ga0207709_10000027 3300025935 Bacteria 339731
93 Ga0207689_10007772 3300025942 Bacteria 9382
94 Ga0207689_10009310 3300025942 Bacteria 8493
95 Ga0207712_10000256 3300025961 Bacteria 51470
96 Ga0207668_10004547 3300025972 Bacteria 8159
97 Ga0207703_10000336 3300026035 Bacteria 51189
98 Ga0207702_10006710 3300026078 Bacteria 9890
99 Ga0207675_100002503 3300026118 Bacteria 18174
100 Ga0207428_10033225 3300027907 Unclassified 4239
101 Ga0307513_10002630 3300031456 Bacteria 24801
102 Ga0436365_0838274 3300039437 Bacteria 7172
103 Ga0496103_0042373 3300048906 Bacteria 2801
104 Ga0501081_0026280 3300049743 Bacteria 3924
105 Ga0501045_0006173 3300049824 Bacteria 8298
106 nmdc:mga05p37_96486_c1 3300050507 Bacteria 3642
107 nmdc:mga08y16_53999_c1 3300050511 Unclassified 4200
108 nmdc:mga08y16_93042_c1 3300050511 Bacteria 3141
109 nmdc:mga0n895_9439_c1 3300050512 Bacteria 8534
110 nmdc:mga0rr50_61797_c1 3300050513 Bacteria 2823
111 nmdc:mga08x19_5_c1 3300050514 Bacteria 464292
112 nmdc:mga0a205_121986_c1 3300050515 Bacteria 2506
113 Ga0500616_0000420 3300053153 Bacteria 56769
114 Ga0501082_0000159 3300060353 Bacteria 57327
115 Ga0501082_0070430 3300060353 Bacteria 3011

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300060353 Ga0501082_0070430 Ga0501082_0070430_1137_2936 590
2 3300048906 Ga0496103_0042373 Ga0496103_0042373_663_2609 619
3 3300005289 Ga0065704_10075589 Ga0065704_100755893 636
4 3300025934 Ga0207686_10000177 Ga0207686_100001772 637
5 3300006871 Ga0075434_100034154 Ga0075434_1000341542 638
6 3300009093 Ga0105240_10032997 Ga0105240_100329976 648
7 3300013307 Ga0157372_10073454 Ga0157372_100734542 648
8 3300025913 Ga0207695_10039306 Ga0207695_100393066 648
9 3300005295 Ga0065707_10085422 Ga0065707_100854224 650
10 3300005617 Ga0068859_100047391 Ga0068859_1000473911 653
11 3300006931 Ga0097620_100047391 Ga0097620_1000473912 653
12 3300050511 nmdc:mga08y16_93042_c1 nmdc:mga08y16_93042_c1_872_3100 653
13 3300009148 Ga0105243_10043701 Ga0105243_100437012 654
14 3300005545 Ga0070695_100031545 Ga0070695_1000315452 655
15 3300006881 Ga0068865_100021763 Ga0068865_1000217631 655
16 3300013306 Ga0163162_10057403 Ga0163162_100574032 655
17 3300025907 Ga0207645_10025750 Ga0207645_100257502 655
18 3300005614 Ga0068856_100011881 Ga0068856_1000118814 658
19 3300060353 Ga0501082_0000159 Ga0501082_0000159_15392_17410 658
20 3300031456 Ga0307513_10002630 Ga0307513_1000263025 659
21 3300005471 Ga0070698_100002619 Ga0070698_10000261911 660
22 3300009148 Ga0105243_10000019 Ga0105243_10000019112 662
23 3300009176 Ga0105242_10000007 Ga0105242_100000079 662
24 3300025934 Ga0207686_10000002 Ga0207686_1000000272 662
25 3300025935 Ga0207709_10000027 Ga0207709_10000027161 662
26 3300014326 Ga0157380_10017107 Ga0157380_100171074 664
27 3300005544 Ga0070686_100006377 Ga0070686_1000063772 666
28 3300005336 Ga0070680_100000438 Ga0070680_10000043822 669
29 3300005458 Ga0070681_10000065 Ga0070681_1000006556 669
30 3300005530 Ga0070679_100000013 Ga0070679_10000001381 669
31 3300025912 Ga0207707_10000004 Ga0207707_10000004245 669
32 3300025917 Ga0207660_10003078 Ga0207660_100030788 669
33 3300025921 Ga0207652_10000122 Ga0207652_1000012225 669
34 3300005334 Ga0068869_100002487 Ga0068869_1000024873 672
35 3300013306 Ga0163162_10030192 Ga0163162_100301924 672
36 3300025942 Ga0207689_10009310 Ga0207689_100093103 672
37 3300026078 Ga0207702_10006710 Ga0207702_100067105 672
38 3300050513 nmdc:mga0rr50_61797_c1 nmdc:mga0rr50_61797_c1_150_2273 672
39 3300009098 Ga0105245_10126622 Ga0105245_101266221 674
40 3300009177 Ga0105248_10056927 Ga0105248_100569272 674
41 3300007265 Ga0099794_10008791 Ga0099794_100087912 675
42 3300009176 Ga0105242_10004220 Ga0105242_100042202 675
43 3300005468 Ga0070707_100007412 Ga0070707_1000074122 676
44 3300006844 Ga0075428_100071115 Ga0075428_1000711152 676
45 3300009094 Ga0111539_10088776 Ga0111539_100887762 676
46 3300009147 Ga0114129_10074490 Ga0114129_100744903 676
47 3300009177 Ga0105248_10002118 Ga0105248_100021182 676
48 3300027907 Ga0207428_10033225 Ga0207428_100332252 676
49 3300050507 nmdc:mga05p37_96486_c1 nmdc:mga05p37_96486_c1_467_2617 676
50 3300005406 Ga0070703_10000250 Ga0070703_100002502 677
51 3300005467 Ga0070706_100000066 Ga0070706_10000006677 677
52 3300025885 Ga0207653_10000077 Ga0207653_1000007744 677
53 3300025910 Ga0207684_10000120 Ga0207684_1000012062 677
54 3300005444 Ga0070694_100038808 Ga0070694_1000388082 678
55 3300006163 Ga0070715_10000064 Ga0070715_100000647 678
56 3300025905 Ga0207685_10000056 Ga0207685_1000005626 678
57 3300053153 Ga0500616_0000420 Ga0500616_0000420_52551_54707 678
58 3300005985 Ga0081539_10000063 Ga0081539_1000006388 679
59 3300005330 Ga0070690_100016913 Ga0070690_1000169132 680
60 3300005334 Ga0068869_100053491 Ga0068869_1000534911 680
61 3300005518 Ga0070699_100000011 Ga0070699_100000011230 680
62 3300005546 Ga0070696_100000007 Ga0070696_10000000782 680
63 3300005347 Ga0070668_100013308 Ga0070668_1000133082 681
64 3300005546 Ga0070696_100025015 Ga0070696_1000250151 681
65 3300009553 Ga0105249_10000686 Ga0105249_100006867 681
66 3300013306 Ga0163162_10000714 Ga0163162_100007147 681
67 3300025961 Ga0207712_10000256 Ga0207712_1000025639 681
68 3300025972 Ga0207668_10004547 Ga0207668_100045474 681
69 3300039437 Ga0436365_0838274 Ga0436365_0838274_1299_3578 681
70 3300005440 Ga0070705_100000002 Ga0070705_10000000285 682
71 3300005438 Ga0070701_10031354 Ga0070701_100313541 683
72 3300005536 Ga0070697_100000209 Ga0070697_10000020917 683
73 3300009553 Ga0105249_10030538 Ga0105249_100305383 683
74 3300014326 Ga0157380_10023618 Ga0157380_100236182 683
75 3300005406 Ga0070703_10000099 Ga0070703_1000009921 684
76 3300006871 Ga0075434_100051293 Ga0075434_1000512932 684
77 3300025885 Ga0207653_10000213 Ga0207653_100002135 684
78 3300005458 Ga0070681_10091027 Ga0070681_100910272 687
79 3300017792 Ga0163161_10020596 Ga0163161_100205962 687
80 3300049743 Ga0501081_0026280 Ga0501081_0026280_1511_3679 687
81 3300049824 Ga0501045_0006173 Ga0501045_0006173_634_2802 687
82 3300050511 nmdc:mga08y16_53999_c1 nmdc:mga08y16_53999_c1_1155_3365 687
83 3300014326 Ga0157380_10009335 Ga0157380_100093352 689
84 3300005718 Ga0068866_10009521 Ga0068866_100095212 690
85 3300013297 Ga0157378_10013420 Ga0157378_100134202 690
86 3300025899 Ga0207642_10004354 Ga0207642_100043543 690
87 3300005444 Ga0070694_100000191 Ga0070694_10000019114 691
88 3300005459 Ga0068867_100062263 Ga0068867_1000622632 692
89 3300005547 Ga0070693_100001139 Ga0070693_1000011396 692
90 3300013297 Ga0157378_10036034 Ga0157378_100360342 692
91 3300006871 Ga0075434_100004602 Ga0075434_1000046025 693
92 3300025933 Ga0207706_10063671 Ga0207706_100636711 693
93 3300050512 nmdc:mga0n895_9439_c1 nmdc:mga0n895_9439_c1_4306_6489 693
94 3300005457 Ga0070662_100017812 Ga0070662_1000178123 694
95 3300005536 Ga0070697_100020727 Ga0070697_1000207273 694
96 3300005719 Ga0068861_100004288 Ga0068861_1000042884 694
97 3300007265 Ga0099794_10004884 Ga0099794_100048846 694
98 3300009553 Ga0105249_10026270 Ga0105249_100262704 694
99 3300013306 Ga0163162_10028718 Ga0163162_100287183 694
100 3300026118 Ga0207675_100002503 Ga0207675_10000250312 694
101 3300050515 nmdc:mga0a205_121986_c1 nmdc:mga0a205_121986_c1_271_2424 694
102 3300006914 Ga0075436_100000194 Ga0075436_10000019436 695
103 3300013297 Ga0157378_10000176 Ga0157378_1000017617 695
104 3300013308 Ga0157375_10001758 Ga0157375_1000175814 695
105 3300025942 Ga0207689_10007772 Ga0207689_100077725 695
106 3300050514 nmdc:mga08x19_5_c1 nmdc:mga08x19_5_c1_131471_133699 695
107 3300002074 JGI24748J21848_1000008 JGI24748J21848_100000837 696
108 3300002239 JGI24034J26672_10000002 JGI24034J26672_10000002435 696
109 3300005355 Ga0070671_100033262 Ga0070671_1000332622 696
110 3300005471 Ga0070698_100000096 Ga0070698_10000009629 696
111 3300005842 Ga0068858_100000055 Ga0068858_10000005590 696
112 3300009101 Ga0105247_10000001 Ga0105247_10000001213 696
113 3300025900 Ga0207710_10000003 Ga0207710_10000003424 696
114 3300025931 Ga0207644_10000257 Ga0207644_1000025716 696
115 3300026035 Ga0207703_10000336 Ga0207703_100003365 696

Structural Annotation

Top 5 Hits

ID Description Score Start End
6w5v-assembly1.cif.gz_D npc1-npc2 complex structure at ph 5.5 0.6997 593 695
8dnc-assembly1.cif.gz_C error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.6832 558 694
6rhv-assembly1.cif.gz_C crystal structure of mouse cd11b i-domain (cd11b-i) in complex with staphylococcus aureus octameric bi-component leukocidin lukgh (lukh k319a mutant) 0.6812 105 281
5fqh-assembly1.cif.gz_A the details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from clostridium perfringens 0.6742 593 696
4brj-assembly1.cif.gz_A superoxide reductase (neelaredoxin) from ignicoccus hospitalis t24k 0.6721 546 694
ID Description Score Start End Superfamily
af_A0A1D6F9G8_47_167_2.60.40.770 Mainly Beta;Sandwich;Immunoglobulin-like; 0.7511 594 695 2.60.40.770
af_Q7YTU0_490_586_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.7315 557 696 2.60.40.1930
af_F1M1X0_357_440_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7282 592 696 2.60.40.10
af_Q63041_453_562_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.7234 558 696 2.60.40.1930
af_O86365_755_877_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7192 593 696 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A7W1CC07-F1-model_v4 Uncharacterized protein 0.9585 592 696
AF-A0A7W1CC07-F1-model_v4 Uncharacterized protein 0.9317 592 696
AF-A0A399WPJ7-F1-model_v4 Uncharacterized protein 0.9261 515 696
AF-A0A3D5SNV8-F1-model_v4 Uncharacterized protein 0.9011 418 694
AF-A0A7W1KYN5-F1-model_v4 GWxTD domain-containing protein 0.8975 493 696

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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