F082482

General Info

Members Datasets Scaffolds Average Seq Length
115 88 115 547

Family's Representative Sequence

Representative Sequence 3300005440|Ga0070705_100037631|Ga0070705_1000376312
Length 593
Sequence MALHPLAGKPAPANTLIDVARLEREYCERQPDLTDVGQLVNFGTSGHRGSSLLGTFNEAHVLAITQAICDYRRSHHIAGPLFMGKDTHALSGPAQRTALEVLAGNHVKTFIQPDDGATPTPVISRAILVHNNDQKEDMADGIVITPSHNPPEDGGFKYNPPNGGPAETDVTKQVQDRANELLCAGNRGVKRMPFAAAIRAASTHQEDFVAAYVNDLRHVIDMDAIRAAGLSLGVDPLGGASVKYWAHIKETYGLNITVVNPRIDPRFGFMTLDHDGKIRMDCSSPYAMAGLVQLKDTYAVAFGNDPDADRHGIVTPSAGLMNPNHFLAVAIHYLLTHRPAWPREAAVGKTLVSSSMIDRVVKHLGRRLAEVPVGFKWFAPGLFDGSICFGGEESAGASFLRRDRSVWTTDKDGIILALLAAEITARTGKDPGVHYRELTAAFGTPYYTRIDAVATPDEKARLQKLSPEAVKASMMAGEPIVAKLTRAPANNQPIGGLKVVTNNGWFAARPSGTENIYKIYAESFTSQSHLDAIVAEAKQIVANALALPAGDSDKEKKKDVASISGNRVGDNSHALLGGFRLWENAARKGKKGT

Samples

Sample ID Description Type Environment
1 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
2 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
3 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
4 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
5 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
6 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
7 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
8 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
18 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
25 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
28 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
39 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
42 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
43 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
44 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
45 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
55 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
59 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
62 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
63 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
64 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
65 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
66 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
67 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
68 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
69 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
70 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
71 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
76 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
77 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
78 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
79 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
80 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
81 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
82 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
83 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
84 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
85 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
86 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
87 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
88 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.87
Nodule 0
Rhizoplane 5.22
Rhizosphere 88.7
Stem 0
Stem Tuber 0
Unclassified 5.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070705_100037631 3300005440 Bacteria 2731
2 Ga0070708_100044839 3300005445 Bacteria 3892
3 Ga0070699_100003196 3300005518 Bacteria 14491
4 Ga0070699_100018380 3300005518 Bacteria 6006
5 Ga0068855_100007781 3300005563 Bacteria 12947
6 Ga0068857_100038166 3300005577 Bacteria 4254
7 Ga0068856_100019408 3300005614 Bacteria 6598
8 Ga0068858_100005738 3300005842 Bacteria 12130
9 Ga0068862_100005233 3300005844 Bacteria 10886
10 Ga0068862_100006355 3300005844 Bacteria 9825
11 Ga0081455_10000809 3300005937 Bacteria 40300
12 Ga0081455_10004667 3300005937 Bacteria 15252
13 Ga0081455_10008264 3300005937 Bacteria 10851
14 Ga0081538_10001208 3300005981 Bacteria 27108
15 Ga0070717_10027435 3300006028 Bacteria 4552
16 Ga0070717_10033634 3300006028 Bacteria 4137
17 Ga0075428_100013802 3300006844 Bacteria 8996
18 Ga0075428_100158436 3300006844 Bacteria 2458
19 Ga0075430_100023499 3300006846 Bacteria 5248
20 Ga0075430_100087832 3300006846 Bacteria 2602
21 Ga0075431_100000129 3300006847 Bacteria 50236
22 Ga0075431_100029702 3300006847 Bacteria 5628
23 Ga0075431_100047955 3300006847 Bacteria 4405
24 Ga0075433_10020395 3300006852 Bacteria 5540
25 Ga0075429_100010374 3300006880 Bacteria 8062
26 Ga0068865_100019176 3300006881 Bacteria 4424
27 Ga0075435_100130826 3300007076 Bacteria 2100
28 Ga0111539_10061913 3300009094 Bacteria 4432
29 Ga0105245_10054776 3300009098 Bacteria 3582
30 Ga0105242_10020841 3300009176 Bacteria 5142
31 Ga0105238_10027013 3300009551 Bacteria 5850
32 Ga0105239_10038043 3300010375 Bacteria 5272
33 Ga0157374_10018843 3300013296 Bacteria 6100
34 Ga0163162_10010830 3300013306 Bacteria 8873
35 Ga0157375_10005555 3300013308 Bacteria 10973
36 Ga0213876_10002496 3300021384 Bacteria 10796
37 Ga0207694_10018678 3300025924 Bacteria 5242
38 Ga0207659_10059143 3300025926 Bacteria 2754
39 Ga0207700_10081993 3300025928 Bacteria 2521
40 Ga0207689_10014758 3300025942 Bacteria 6633
41 Ga0207667_10002350 3300025949 Bacteria 23704
42 Ga0207712_10009436 3300025961 Bacteria 6175
43 Ga0207668_10121192 3300025972 Bacteria 1981
44 Ga0207668_10150479 3300025972 Bacteria 1801
45 Ga0207702_10023199 3300026078 Bacteria 5146
46 Ga0207674_10063527 3300026116 Bacteria 3727
47 Ga0207675_100000379 3300026118 Bacteria 42654
48 Ga0207675_100030040 3300026118 Bacteria 5059
49 Ga0207428_10005782 3300027907 Bacteria 11482
50 Ga0268265_10093876 3300028380 Bacteria 2405
51 Ga0268264_10023501 3300028381 Bacteria 5027
52 Ga0265323_10011460 3300028653 Bacteria 3578
53 Ga0265330_10006940 3300031235 Bacteria 5562
54 Ga0265328_10003440 3300031239 Bacteria 6992
55 Ga0265329_10000129 3300031242 Bacteria 36251
56 Ga0265339_10006620 3300031249 Bacteria 7579
57 Ga0265327_10000782 3300031251 Bacteria 49078
58 Ga0265316_10001897 3300031344 Bacteria 21968
59 Ga0265316_10008635 3300031344 Bacteria 9434
60 Ga0265316_10054301 3300031344 Bacteria 3137
61 Ga0265316_10096984 3300031344 Bacteria 2244
62 Ga0307408_100051138 3300031548 Bacteria 2975
63 Ga0265314_10000653 3300031711 Bacteria 42465
64 Ga0265314_10001715 3300031711 Bacteria 23790
65 Ga0307405_10010292 3300031731 Bacteria 4836
66 Ga0307413_10064821 3300031824 Bacteria 2272
67 Ga0307409_100068821 3300031995 Bacteria 2801
68 Ga0307416_100015701 3300032002 Bacteria 5239
69 Ga0307414_10055264 3300032004 Bacteria 2779
70 Ga0307411_10003212 3300032005 Bacteria 7525
71 Ga0316584_0085086 3300036712 Bacteria 2368
72 Ga0373925_0083674 3300037068 Bacteria 2431
73 Ga0436364_0339599 3300037853 Bacteria 2041
74 Ga0436364_0466280 3300037853 Bacteria 3035
75 Ga0400483_069014 3300039062 Bacteria 11319
76 Ga0400483_174753 3300039062 Bacteria 26112
77 Ga0436365_1047973 3300039437 Bacteria 60576
78 Ga0451807_1473278 3300041486 Bacteria 9666
79 Ga0439459_0007614 3300042438 Bacteria 1834
80 Ga0451576_0000635 3300045051 Bacteria 73052
81 Ga0451576_0021400 3300045051 Bacteria 7029
82 Ga0451576_0024641 3300045051 Bacteria 6497
83 Ga0495580_0002569 3300046472 Bacteria 15791
84 Ga0495582_0013305 3300046473 Bacteria 4530
85 Ga0495604_0024449 3300047317 Bacteria 4820
86 Ga0495674_0075119 3300047319 Bacteria 2909
87 Ga0496104_0137992 3300048907 Bacteria 2343
88 Ga0496109_0002437 3300048912 Bacteria 15578
89 Ga0496112_0003399 3300048915 Bacteria 13143
90 Ga0496113_0007058 3300048916 Bacteria 7189
91 Ga0496113_0086429 3300048916 Bacteria 2410
92 Ga0501034_0087045 3300049571 Bacteria 3124
93 Ga0501036_0096368 3300049572 Bacteria 2501
94 Ga0501036_0120808 3300049572 Bacteria 2213
95 Ga0501047_0030671 3300049581 Bacteria 5182
96 Ga0501070_0014847 3300049586 Bacteria 6553
97 Ga0501075_0107941 3300049591 Bacteria 2116
98 Ga0501080_0166049 3300049742 Bacteria 2037
99 Ga0501044_0001411 3300049823 Bacteria 28182
100 nmdc:mga05p37_11913_c1 3300050507 Bacteria 10370
101 nmdc:mga05p37_55304_c1 3300050507 Bacteria 4883
102 nmdc:mga05p37_65428_c1 3300050507 Bacteria 4473
103 nmdc:mga05p37_8979_c1 3300050507 Bacteria 11821
104 nmdc:mga09592_115_c1 3300050508 Bacteria 50649
105 nmdc:mga0qj67_14578_c1 3300050509 Bacteria 5943
106 nmdc:mga06r32_725_c1 3300050510 Bacteria 28931
107 nmdc:mga06r32_8179_c1 3300050510 Bacteria 9412
108 nmdc:mga08y16_10782_c1 3300050511 Bacteria 9593
109 nmdc:mga0a205_11026_c1 3300050515 Bacteria 8319
110 nmdc:mga0a205_111369_c1 3300050515 Bacteria 2636
111 nmdc:mga0a205_42606_c1 3300050515 Bacteria 4374
112 Ga0495601_0001372 3300053077 Bacteria 13398
113 Ga0495619_0010176 3300053085 Bacteria 5925
114 Ga0500622_0007090 3300053156 Bacteria 6409
115 Ga0501082_0104196 3300060353 Bacteria 2454

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047317 Ga0495604_0024449 Ga0495604_0024449_3267_4799 510
2 3300045051 Ga0451576_0000635 Ga0451576_0000635_29263_30900 513
3 3300045051 Ga0451576_0021400 Ga0451576_0021400_3741_5375 523
4 3300005981 Ga0081538_10001208 Ga0081538_1000120810 528
5 3300005937 Ga0081455_10000809 Ga0081455_1000080921 529
6 3300006844 Ga0075428_100013802 Ga0075428_1000138024 529
7 3300006846 Ga0075430_100023499 Ga0075430_1000234995 529
8 3300006847 Ga0075431_100029702 Ga0075431_1000297022 529
9 3300006880 Ga0075429_100010374 Ga0075429_1000103741 529
10 3300027907 Ga0207428_10005782 Ga0207428_1000578211 529
11 3300050507 nmdc:mga05p37_8979_c1 nmdc:mga05p37_8979_c1_1891_3516 529
12 3300050508 nmdc:mga09592_115_c1 nmdc:mga09592_115_c1_37434_39059 529
13 3300050509 nmdc:mga0qj67_14578_c1 nmdc:mga0qj67_14578_c1_3011_4636 529
14 3300050510 nmdc:mga06r32_725_c1 nmdc:mga06r32_725_c1_23499_25124 529
15 3300050511 nmdc:mga08y16_10782_c1 nmdc:mga08y16_10782_c1_2217_3842 529
16 3300050515 nmdc:mga0a205_111369_c1 nmdc:mga0a205_111369_c1_961_2586 529
17 3300006844 Ga0075428_100158436 Ga0075428_1001584362 531
18 3300007076 Ga0075435_100130826 Ga0075435_1001308262 531
19 3300028653 Ga0265323_10011460 Ga0265323_100114602 531
20 3300050515 nmdc:mga0a205_11026_c1 nmdc:mga0a205_11026_c1_3081_4676 531
21 3300006847 Ga0075431_100000129 Ga0075431_10000012958 533
22 3300048907 Ga0496104_0137992 Ga0496104_0137992_23_1624 533
23 3300009094 Ga0111539_10061913 Ga0111539_100619132 539
24 3300049572 Ga0501036_0120808 Ga0501036_0120808_393_2039 540
25 3300005937 Ga0081455_10004667 Ga0081455_100046676 541
26 3300005937 Ga0081455_10008264 Ga0081455_100082646 543
27 3300039062 Ga0400483_069014 Ga0400483_069014_3462_5093 543
28 3300039062 Ga0400483_174753 Ga0400483_174753_21624_23255 543
29 3300041486 Ga0451807_1473278 Ga0451807_1473278_3089_4720 543
30 3300006846 Ga0075430_100087832 Ga0075430_1000878322 544
31 3300053156 Ga0500622_0007090 Ga0500622_0007090_2452_4086 544
32 3300005844 Ga0068862_100005233 Ga0068862_1000052333 545
33 3300049572 Ga0501036_0096368 Ga0501036_0096368_825_2480 545
34 3300049591 Ga0501075_0107941 Ga0501075_0107941_278_1933 545
35 3300053077 Ga0495601_0001372 Ga0495601_0001372_7973_9625 545
36 3300053085 Ga0495619_0010176 Ga0495619_0010176_3716_5368 545
37 3300060353 Ga0501082_0104196 Ga0501082_0104196_499_2154 545
38 3300025972 Ga0207668_10150479 Ga0207668_101504791 546
39 3300026118 Ga0207675_100030040 Ga0207675_1000300402 546
40 3300031235 Ga0265330_10006940 Ga0265330_100069402 546
41 3300031344 Ga0265316_10001897 Ga0265316_100018976 546
42 3300046472 Ga0495580_0002569 Ga0495580_0002569_7185_8891 546
43 3300046473 Ga0495582_0013305 Ga0495582_0013305_2716_4422 546
44 3300047319 Ga0495674_0075119 Ga0495674_0075119_1025_2665 546
45 3300048912 Ga0496109_0002437 Ga0496109_0002437_1264_2904 546
46 3300048916 Ga0496113_0007058 Ga0496113_0007058_2358_3998 546
47 3300006847 Ga0075431_100047955 Ga0075431_1000479552 547
48 3300009098 Ga0105245_10054776 Ga0105245_100547764 547
49 3300021384 Ga0213876_10002496 Ga0213876_100024968 547
50 3300031824 Ga0307413_10064821 Ga0307413_100648212 547
51 3300031995 Ga0307409_100068821 Ga0307409_1000688212 547
52 3300032004 Ga0307414_10055264 Ga0307414_100552641 547
53 3300032005 Ga0307411_10003212 Ga0307411_100032122 547
54 3300037853 Ga0436364_0466280 Ga0436364_0466280_1292_2935 547
55 3300039437 Ga0436365_1047973 Ga0436365_1047973_21143_22786 547
56 3300049742 Ga0501080_0166049 Ga0501080_0166049_315_1958 547
57 3300050510 nmdc:mga06r32_8179_c1 nmdc:mga06r32_8179_c1_3522_5177 547
58 3300005518 Ga0070699_100018380 Ga0070699_1000183802 548
59 3300005563 Ga0068855_100007781 Ga0068855_1000077817 548
60 3300005614 Ga0068856_100019408 Ga0068856_1000194083 548
61 3300005842 Ga0068858_100005738 Ga0068858_1000057386 548
62 3300005844 Ga0068862_100006355 Ga0068862_1000063555 548
63 3300006028 Ga0070717_10027435 Ga0070717_100274352 548
64 3300006881 Ga0068865_100019176 Ga0068865_1000191762 548
65 3300009551 Ga0105238_10027013 Ga0105238_100270132 548
66 3300010375 Ga0105239_10038043 Ga0105239_100380432 548
67 3300013296 Ga0157374_10018843 Ga0157374_100188433 548
68 3300013306 Ga0163162_10010830 Ga0163162_100108305 548
69 3300013308 Ga0157375_10005555 Ga0157375_100055556 548
70 3300025924 Ga0207694_10018678 Ga0207694_100186782 548
71 3300025928 Ga0207700_10081993 Ga0207700_100819932 548
72 3300025942 Ga0207689_10014758 Ga0207689_100147585 548
73 3300025949 Ga0207667_10002350 Ga0207667_1000235017 548
74 3300025961 Ga0207712_10009436 Ga0207712_100094362 548
75 3300026078 Ga0207702_10023199 Ga0207702_100231995 548
76 3300026118 Ga0207675_100000379 Ga0207675_10000037934 548
77 3300028381 Ga0268264_10023501 Ga0268264_100235012 548
78 3300031251 Ga0265327_10000782 Ga0265327_1000078234 548
79 3300031711 Ga0265314_10001715 Ga0265314_1000171515 548
80 3300036712 Ga0316584_0085086 Ga0316584_0085086_415_2085 548
81 3300048915 Ga0496112_0003399 Ga0496112_0003399_3049_4743 548
82 3300049571 Ga0501034_0087045 Ga0501034_0087045_1019_2689 548
83 3300005445 Ga0070708_100044839 Ga0070708_1000448395 549
84 3300005518 Ga0070699_100003196 Ga0070699_1000031968 549
85 3300006852 Ga0075433_10020395 Ga0075433_100203952 549
86 3300042438 Ga0439459_0007614 Ga0439459_0007614_88_1743 549
87 3300050507 nmdc:mga05p37_11913_c1 nmdc:mga05p37_11913_c1_7129_8802 549
88 3300050507 nmdc:mga05p37_55304_c1 nmdc:mga05p37_55304_c1_287_1936 549
89 3300050507 nmdc:mga05p37_65428_c1 nmdc:mga05p37_65428_c1_175_1824 549
90 3300050515 nmdc:mga0a205_42606_c1 nmdc:mga0a205_42606_c1_726_2375 549
91 3300006028 Ga0070717_10033634 Ga0070717_100336343 550
92 3300009176 Ga0105242_10020841 Ga0105242_100208412 550
93 3300025972 Ga0207668_10121192 Ga0207668_101211922 550
94 3300028380 Ga0268265_10093876 Ga0268265_100938762 550
95 3300031242 Ga0265329_10000129 Ga0265329_1000012925 550
96 3300031249 Ga0265339_10006620 Ga0265339_100066203 550
97 3300031344 Ga0265316_10008635 Ga0265316_100086359 550
98 3300031344 Ga0265316_10096984 Ga0265316_100969842 550
99 3300031548 Ga0307408_100051138 Ga0307408_1000511382 550
100 3300031731 Ga0307405_10010292 Ga0307405_100102924 550
101 3300032002 Ga0307416_100015701 Ga0307416_1000157015 550
102 3300048916 Ga0496113_0086429 Ga0496113_0086429_708_2360 550
103 3300037068 Ga0373925_0083674 Ga0373925_0083674_305_1984 551
104 3300049581 Ga0501047_0030671 Ga0501047_0030671_1241_2896 551
105 3300049586 Ga0501070_0014847 Ga0501070_0014847_4254_5909 551
106 3300049823 Ga0501044_0001411 Ga0501044_0001411_22480_24135 551
107 3300005577 Ga0068857_100038166 Ga0068857_1000381662 552
108 3300025926 Ga0207659_10059143 Ga0207659_100591432 552
109 3300026116 Ga0207674_10063527 Ga0207674_100635272 552
110 3300031239 Ga0265328_10003440 Ga0265328_100034402 559
111 3300031344 Ga0265316_10054301 Ga0265316_100543012 559
112 3300031711 Ga0265314_10000653 Ga0265314_1000065312 559
113 3300045051 Ga0451576_0024641 Ga0451576_0024641_266_1954 559
114 3300037853 Ga0436364_0339599 Ga0436364_0339599_166_1896 576
115 3300005440 Ga0070705_100037631 Ga0070705_1000376312 593

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02878

PGM_PMM_I

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I

39

182

0.96

PF02880

PGM_PMM_III

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III

322

442

0.95

PF02879

PGM_PMM_II

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II

210

318

0.88

PF00408

PGM_PMM_IV

Phosphoglucomutase/phosphomannomutase, C-terminal domain

453

540

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z0f-assembly1.cif.gz_A crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.9761 17 546
2z0f-assembly1.cif.gz_A crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.9741 17 546
2z0f-assembly1.cif.gz_B crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.971 17 546
2z0f-assembly1.cif.gz_B crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.9691 17 546
2fuv-assembly1.cif.gz_B phosphoglucomutase from salmonella typhimurium. 0.9634 2 545
ID Description Score Start End Superfamily
3na5B03 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9947 320 444 3.40.120.10
3na5B03 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9868 320 444 3.40.120.10
2z0fB01 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9582 17 217 3.40.120.10
2fuvB04 Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;Alpha-D-phosphohexomutase, C-terminal domain 0.9524 446 545 3.30.310.50
3na5B02 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9462 225 318 3.40.120.10
ID Description Score Start End GO Terms
AF-A0A6B3FA07-F1-model_v4 Phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2) 0.9928 310 413 GO:0004614
GO:0005829
GO:0005975
AF-A0A537K955-F1-model_v4 Alpha-D-glucose phosphate-specific phosphoglucomutase (EC 5.4.2.2) 0.9898 1 431 GO:0000287
GO:0004614
GO:0005829
GO:0005975
AF-A0A4Q7CIH9-F1-model_v4 Phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2) 0.9886 291 411 GO:0004614
GO:0005829
GO:0005975
AF-A0A094WAR0-F1-model_v4 Phosphoglucomutase (EC 5.4.2.2) 0.9885 1 547 GO:0000287
GO:0004614
GO:0005975
GO:0006166
GO:0008973
AF-A0A401WTR9-F1-model_v4 Phosphoglucomutase (EC 5.4.2.2) 0.9885 55 546 GO:0000287
GO:0004614
GO:0005975
GO:0006166
GO:0008973

Feature Viewer

pLDDT pTM Quality
88.31 0.88 High
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Predicted Structure (AlphaFold2)

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